github.com/ome/omero-cli-transfer issues | Ecosyste.ms: OpenCollective

Using omero transfer prepare on a systemd service

technics3 opened this issue about 1 month ago

Build

jburel opened this pull request about 1 month ago

dealing with empty `image.name` returned by `showinf` in `prepare` (also updating dependencies)

erickmartins opened this pull request 4 months ago

using updated pytest interface

erickmartins opened this pull request 5 months ago

packing/unpacking just the organizational structure, not the files

dsudar opened this issue 5 months ago

Issue when packing multiple Projects

lguerard opened this issue 6 months ago

Attribute "Name" not set when importing a .czi file

technics3 opened this issue 7 months ago

Readme update, test infra update

erickmartins opened this pull request 7 months ago

packing list of objects

erickmartins opened this pull request 7 months ago

Making reference to image IDs not contained in a pack negative in Figures

erickmartins opened this pull request 8 months ago

transfer rendering settings

erickmartins opened this issue 9 months ago

Fix non-existent image IDs in a Figure

erickmartins opened this issue 9 months ago

raising a `NonzeroReturnCode` when download fails

erickmartins opened this pull request 10 months ago

sets action to "published" so it runs on prereleases

erickmartins opened this pull request 11 months ago

Annotation namespace corruption

joshmoore opened this issue 12 months ago

Version compatibility

joshmoore opened this issue 12 months ago

Restricted downloads silently ignored?

joshmoore opened this issue 12 months ago

pack a list of images (a subset of a dataset)

MM-abdrabbou opened this issue 12 months ago

Update infra

jburel opened this pull request 12 months ago

Changing from negative-id `CommentAnnotations` and `MapAnnotations` to `XMLAnnotations` for non-OME data model info

erickmartins opened this pull request about 1 year ago

Added plugin interface for external packers

cmohl2013 opened this pull request about 1 year ago

adds a --metadata-only option to pack

glyg opened this pull request about 1 year ago

Is it possible to write an updated transfer.xml after unpack?

glyg opened this issue about 1 year ago

migrate to Docker Compose V2 using 'docker compose'

govekk opened this pull request about 1 year ago

RFE: server-side option

joshmoore opened this issue about 1 year ago

ARC export option

cmohl2013 opened this issue about 1 year ago

Packing and unpacking figures

erickmartins opened this pull request about 1 year ago

Using XMLAnnotations for non-OME info

erickmartins opened this issue about 1 year ago

Human readable pack

erickmartins opened this pull request over 1 year ago

object references in tables broken after unpack

juliomateoslangerak opened this issue over 1 year ago

"human-readable" `pack`

erickmartins opened this issue over 1 year ago

updated ome-types version

erickmartins opened this pull request over 1 year ago

using relative paths for `--filelist` as well

erickmartins opened this pull request over 1 year ago

prepare now uses relative paths

erickmartins opened this pull request over 1 year ago

[BUG] `prepare` hardcodes folder paths

erickmartins opened this issue over 1 year ago

Fix typo in README.md (forge not force, and single =)

psobolewskiPhD opened this pull request over 1 year ago

Add `--merge` option to `unpack`

erickmartins opened this pull request over 1 year ago

[FEATURE] add `--merge` option

erickmartins opened this issue over 1 year ago

`prepare` can take a filelist instead of folder path

erickmartins opened this pull request over 1 year ago

small bug found in create_plate_map

tlambert03 opened this issue over 1 year ago

Add "filelist" option to `prepare`

erickmartins opened this issue over 1 year ago

EXPERIMENTAL addition of `omero transfer prepare`

erickmartins opened this pull request over 1 year ago

allow `unpack`ing from a "clean" OME-XML

erickmartins opened this issue over 1 year ago

select which kinds of annotations to pack/unpack

erickmartins opened this issue over 1 year ago

Use new `Shape`s from ezomero

erickmartins opened this issue over 1 year ago

Do not specify Python version

jburel opened this pull request over 1 year ago

licensing update

erickmartins opened this pull request over 1 year ago

fix indentation

jburel opened this pull request over 1 year ago

Attach acquisition metadata

eyshin05 opened this pull request almost 2 years ago

remove twine

jburel opened this pull request almost 2 years ago

Export/import acquisition metadata

eyshin05 opened this pull request almost 2 years ago

RO-crate support

erickmartins opened this pull request almost 2 years ago

OME-NGFF transfer fails

pwalczysko opened this issue almost 2 years ago

Roi and plate fixes

erickmartins opened this pull request almost 2 years ago

Text ROIs font

pwalczysko opened this issue almost 2 years ago

Add DOI

erickmartins opened this issue almost 2 years ago

Better tests, fixing "dataset to plate" issue and ROI fill/strokecolors

erickmartins opened this pull request almost 2 years ago

Typed functions

erickmartins opened this pull request about 2 years ago

add RO-Crate export option

erickmartins opened this issue about 2 years ago

Fix formatting of <object> etc in README

will-moore opened this pull request over 2 years ago

Plate created using Dataset to Plate

pwalczysko opened this issue over 2 years ago

Plate:ID and Screen:ID do not work in pack

pwalczysko opened this issue over 2 years ago

Adds `--metadata` options to `pack` and `unpack`

erickmartins opened this pull request over 2 years ago

added import `--skip` options

erickmartins opened this pull request over 2 years ago

Adding the option to skip the upgrade check of the OMERO import

JensWendt opened this issue over 2 years ago

fixes imports that autogenerate annotations

erickmartins opened this pull request over 2 years ago

Md5 fix for OOM errors and skipping failed/missing images

erickmartins opened this pull request over 2 years ago

Make unpack errors fail more gracefully

erickmartins opened this issue over 2 years ago

Bioimage archive export option

erickmartins opened this pull request over 2 years ago

Make transfer metadata optional

erickmartins opened this issue over 2 years ago

Extra packing/unpacking options

erickmartins opened this pull request over 2 years ago

Allow for different export formats

erickmartins opened this issue over 2 years ago

Improved testing

erickmartins opened this pull request over 2 years ago

pip install problem

abhamacher opened this issue almost 3 years ago

casting ID of non-file image as str for export