Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/OpenMS/OpenMS

The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS

[FIX] TOPPAS: open files in TOPPView

cbielow opened this pull request 11 months ago
Update openms_ci_matrix_full.yml

poshul opened this pull request 11 months ago
Resampler uses Da instead of PPM

cbielow opened this issue 11 months ago
Release action

poshul opened this pull request 11 months ago
Feature/csv comments

enetz opened this pull request 11 months ago
[NOMERGE] Release3.0.0 winfix

cbielow opened this pull request 11 months ago
[fix] add licenses for tool_description_lib

poshul opened this pull request 11 months ago
NOP

timosachsenberg opened this issue 11 months ago
Bump src/pyOpenMS/pyopenms-docs from `64016e7` to `16607af`

dependabot[bot] opened this pull request 11 months ago
Install 3.x.0 for single user in windows doesn't create shortcuts

poshul opened this issue 11 months ago
Improve spectrum visualization and also provide in streamlit template

timosachsenberg opened this issue 11 months ago
Resolve KNIME THIRDPARTY issues

timosachsenberg opened this issue 11 months ago
Host FLASHViewer

timosachsenberg opened this issue 11 months ago
Review/Work on FragmentIndex PR

timosachsenberg opened this issue 11 months ago
Replace SIRIUSAdapter with SIRIUSExporter, adapt AssayGeneratorMetabo and reimplement DIAMetalyzer workflow with it

timosachsenberg opened this issue 11 months ago
Add mold linker

timosachsenberg opened this pull request 11 months ago
Remove the rest of ERPairFinder

poshul opened this pull request 11 months ago
Loading pepxml files : RuntimeError: the value 'B' was used but is not valid; Modification '': origin must be a letter from A to Y, excluding B and J.

coalooball opened this issue 11 months ago
Bump src/pyOpenMS/pyopenms-docs from `64016e7` to `1d810ae`

dependabot[bot] opened this pull request 11 months ago
[GHA] Overwrite 1k NSIS without prompt

poshul opened this pull request 11 months ago
Update openms_ci_matrix_full.yml

poshul opened this pull request 11 months ago
Win installer: check for correct NSIS version

cbielow opened this pull request 11 months ago
Feature/includes

hroest opened this pull request 11 months ago
[GHA] use custom NSIS for Windows installer

cbielow opened this pull request 11 months ago
Fix win installer

cbielow opened this pull request 11 months ago
Expose MetaboliteAdductDecharger functionality in pyOpenMS

timosachsenberg opened this issue 12 months ago
Ontology based tool annotation

bernt-matthias opened this issue 12 months ago
[CLEANUP] remove unused and outdated wavelet code

timosachsenberg opened this pull request 12 months ago
rename peakpickermrm to peakpickerchromatogram

timosachsenberg opened this pull request 12 months ago
fix some compile warnings and add sage citation

timosachsenberg opened this pull request 12 months ago
[DOC] Annotate SpectraFilter tools

cbielow opened this pull request 12 months ago
SageAdapter crashes

cbielow opened this issue 12 months ago
suggestion: rename PeakPickerMRM to PeakPickerChromatogram

timosachsenberg opened this issue 12 months ago
ParamEditor: Move getting-tags-part to avoid error from a node (subsection param)

JeeH-K opened this pull request 12 months ago
Bump src/pyOpenMS/pyopenms-docs from `4bc75aa` to `64016e7`

dependabot[bot] opened this pull request 12 months ago
IdentificationData bug

cbielow opened this issue 12 months ago
EICExtractor use trapezoid integration

timosachsenberg opened this pull request 12 months ago
[FIX] make FileConverter more robust

cbielow opened this pull request 12 months ago
Fix PyPi Publish Warnings

matteopilz opened this pull request 12 months ago
Update python_versions.json to rotate with 3.12

jpfeuffer opened this pull request 12 months ago
Bump src/pyOpenMS/pyopenms-docs from `b44adfe` to `4bc75aa`

dependabot[bot] opened this pull request 12 months ago
fix compile error in MzQCFile.cpp for clang11(linux)

cbielow opened this pull request 12 months ago
TOPP_IsobaricAnalyzer_MS3TMT10Plex_1_out1 failed in ARM64

sagitter opened this issue 12 months ago
update mascot test file

timosachsenberg opened this pull request 12 months ago
Only load MS1 in EICExtractor

timosachsenberg opened this pull request 12 months ago
PeakFileOptions should not be set as member of FileHandler

timosachsenberg opened this issue 12 months ago
Bump THIRDPARTY from `e492568` to `947b56a`

dependabot[bot] opened this pull request 12 months ago
Bump contrib from `3d8710c` to `69e61f2`

dependabot[bot] opened this pull request 12 months ago
IsobaricQuantifier MS2/3 error handling

jpfeuffer opened this issue 12 months ago
Fix mascot thirdparty test

timosachsenberg opened this issue 12 months ago
Fix some bugs and warnings

cbielow opened this pull request 12 months ago
FLASHDeconvWizard: runnning fails

JeeH-K opened this issue 12 months ago
Fix ubuntu wheels test

matteopilz opened this pull request 12 months ago
Add more tests for FLASHDeconv

bernt-matthias opened this pull request 12 months ago
fix: xvfb not starting when xvfb is already running

SGSSGene opened this pull request 12 months ago
improve tool descriptions (slightly)

bernt-matthias opened this pull request 12 months ago
Feat/check for duplicate options

SGSSGene opened this pull request 12 months ago
[INFO] OpenMSInfo: report which ILP lib we use

cbielow opened this pull request 12 months ago
[FIX] MSFragger: relative path to database

cbielow opened this pull request 12 months ago
Remove duplicate option names

SGSSGene opened this pull request 12 months ago
[FIX] mzIdentML improvements (cvParam parsing and more)

cbielow opened this pull request 12 months ago
MSFragger does not work with relative pathnames

bernt-matthias opened this issue 12 months ago
MetaboliteAdductDecharger - multimer annotation

YasinEl opened this issue 12 months ago
Core dump for AssayGeneratorMetabo

bernt-matthias opened this issue 12 months ago
Core dump for dechargers

bernt-matthias opened this issue 12 months ago
remove remnant CompNovo test data

bernt-matthias opened this pull request 12 months ago
Fix MzQuantMLHandler error when <Modification> element has no "massDelta" attribute)

cbielow opened this pull request 12 months ago
Release/3.1.0

timosachsenberg opened this pull request 12 months ago
MzQuantMLHandler error when <Modification> element has no "massDelta" attribute

elrubio opened this issue 12 months ago
Fix a few AddressSanitizer complaints due to uninitialized variables

enetz opened this pull request 12 months ago
Windows installer hangs when installing VS runtime

cbielow opened this issue almost 1 year ago
FlashDeconv: add citation to TOPP tool and more docs

cbielow opened this pull request almost 1 year ago
Update executables.cmake

Arslan-Siraj opened this pull request about 1 year ago
disable failing SIRIUS tests

timosachsenberg opened this pull request about 1 year ago
[FEATURE] TOPPAS: search tools by name

cbielow opened this pull request about 1 year ago
sync

timosachsenberg opened this pull request about 1 year ago
sync with develop

timosachsenberg opened this pull request about 1 year ago
disable rsync

timosachsenberg opened this pull request about 1 year ago
some experiments regarding the imputation step in elutionmodelfitter

timosachsenberg opened this pull request about 1 year ago
fix FlashDeconv docu (missing parameters)

cbielow opened this pull request about 1 year ago
[code reading and commenting practice] SimpleSearchEngineAlgorithm.cpp

Ayesha-Feroz opened this pull request about 1 year ago
Fix TOPP categories and make OpenMSInfo a TOPP tool

cbielow opened this pull request about 1 year ago
Read RT back in minutes in percolator in file

timosachsenberg opened this pull request about 1 year ago
[FFID][tweak] thoughts on settings/scores

jpfeuffer opened this pull request about 1 year ago
[mzIdentML] fall back to name element for DatabaseName

jpfeuffer opened this pull request about 1 year ago
[ByGHAction] Updated OpenMS package version numbers

github-actions[bot] opened this pull request about 1 year ago
Ini files have duplicate option names

SGSSGene opened this issue about 1 year ago
Newly created folders in build archive no accessible

poshul opened this issue about 1 year ago
Version number of .TOPPAS files in tests not updated automatically on new release

poshul opened this issue about 1 year ago
TOPP_ProteomicsLFQ_10 out tests failing on windows in CI

poshul opened this issue about 1 year ago
Release checklist for 3.2.0

poshul opened this issue about 1 year ago
Update INIUpdater_1_noupdate.toppas to output correct version

poshul opened this pull request about 1 year ago
removed unstable (SVM) tests

timosachsenberg opened this pull request about 1 year ago
remove uniqueToProt from mascot psm features

jonasscheid opened this pull request about 1 year ago
InternalCalibration fails due to SageAdapter's idXML files storing RT as minutes

elrubio opened this issue about 1 year ago
MASCOT:uniqueToProt is added by PSMFeatureExtractor but can potentially leak td-information

jonasscheid opened this issue about 1 year ago
q-value based filtering of features in PLFQ

timosachsenberg opened this pull request about 1 year ago
[code reading practice]Update Tagger.cpp

Ayesha-Feroz opened this pull request about 1 year ago
add column for area output

timosachsenberg opened this pull request about 1 year ago
[HOTFIX][PIN files] wrong mz loading

jpfeuffer opened this pull request about 1 year ago