github.com/OpenMS/OpenMS issues | Ecosyste.ms: OpenCollective

fix for CI on mac x86

poshul opened this pull request 9 days ago

expose eigen downstream

timosachsenberg opened this pull request 9 days ago

make setup.py check for AVX support

poshul opened this pull request 9 days ago

Fix remove old pyds

poshul opened this pull request 10 days ago

Update pyopenms-wheels.yml

poshul opened this pull request 10 days ago

PyOpenMS 3.2.0 build fails on bioconda due to Eigen3 not found

jonasscheid opened this issue 10 days ago

FLASHDeconv msAlign Export

jgpavek opened this issue 10 days ago

Decoy phosho added to unimod.xml

ypriverol opened this pull request 10 days ago

Release/3.2.0

poshul opened this pull request 10 days ago

Updates unimod and adds back custom mods

timosachsenberg opened this pull request 11 days ago

better variable names

timosachsenberg opened this pull request 11 days ago

Wheel action tries to delete wrong libraries

jpfeuffer opened this issue 11 days ago

Python wheels still/again packaging dlls for multiple versions

jpfeuffer opened this issue 11 days ago

Update unimod.xml and unimod.obo to "12:08:2024 11:33"

fcyu opened this pull request 11 days ago

merge back changes from release branch

timosachsenberg opened this pull request 11 days ago

Retention Time Correction

LeonSaal opened this issue 11 days ago

Untargeted Metabolomics for Direct Injection

felipe-mansoldo opened this issue 14 days ago

Updated for loop

sa-shaheer-ali opened this pull request 14 days ago

add isobaric correction defaults for tmt6plex and 11plex

timosachsenberg opened this pull request 14 days ago

ImportError with pyOpenMS version 3.2.0 on Windows when PyArrow was imported

RalfG opened this issue 17 days ago

fix scan number extraction for merged spectra

t0mdavid-m opened this pull request 18 days ago

DONT MERGE Pr 7577

timosachsenberg opened this pull request 22 days ago

updating CometAdapter with new parameters

MaLLLiYA opened this pull request 23 days ago

Can't store peptide identification with spectrum to mzml file using pyopenms 3.1.0

grimace9527 opened this issue 24 days ago

Update FeatureMap.pxd

timosachsenberg opened this pull request 25 days ago

FeatureFinderMetabo: param to toggle reporting smoothed intensities

rickhelmus opened this pull request 27 days ago

Bump src/pyOpenMS/pyopenms-docs from `9875a9e` to `63fdab2`

dependabot[bot] opened this pull request 28 days ago

Update COMET to the latest version

MaLLLiYA opened this issue 30 days ago

OpenMS 3.2 Dockerfiles

prvst opened this issue about 1 month ago

update citation info to OpenMS 3 for GUI apps

cbielow opened this pull request about 1 month ago

Merge latest release into develop

github-actions[bot] opened this pull request about 1 month ago

[ByGHAction] Updated OpenMS package version numbers

github-actions[bot] opened this pull request about 1 month ago

Update/OpenSwathWorkflow IonMobilityScoring Mobilogram Datastructure

singjc opened this pull request about 1 month ago

Bump THIRDPARTY from `d6594eb` to `6c4aff6`

dependabot[bot] opened this pull request about 1 month ago

TOPPView: open idXML in same layer as underlying data, if raw mzML is detected …

cbielow opened this pull request about 1 month ago

Defining more enzymes in OpenMS Comet and SAGE adaptor

MaLLLiYA opened this pull request about 1 month ago

FragmentIndex search engine

timosachsenberg opened this pull request about 1 month ago

FR: report non-smoothed intensities with FFM

rickhelmus opened this issue about 1 month ago

Bottom up fiid [do not merge]

timosachsenberg opened this pull request about 1 month ago

Update openms_ci_matrix_full.yml

poshul opened this pull request about 1 month ago

Parse IM in CometAdapter

jonasscheid opened this issue about 1 month ago

Bump src/pyOpenMS/pyopenms-docs from `7628c88` to `63fdab2`

dependabot[bot] opened this pull request about 1 month ago

Updating SageAdapter with new functionality + compatibility with new Sage versions

JohannesvKL opened this pull request about 1 month ago

fix broken link in pyOpenMS docs

cbielow opened this pull request about 2 months ago

update Windows release notes

cbielow opened this pull request about 2 months ago

libsvm cmake configuration errors on mac

timosachsenberg opened this issue about 2 months ago

fix MSIP part in KNIME

timosachsenberg opened this pull request about 2 months ago

KNIME overwrite mime type error

timosachsenberg opened this issue about 2 months ago

Copyright questions for files outside of OpenMS

lopippo opened this issue about 2 months ago

The tutorial binaries are not installed ?

lopippo opened this issue about 2 months ago

Support vcpkg automatic build

AHzhangwen opened this issue 2 months ago

Support Mztab in FileInfo tool

cbielow opened this pull request 2 months ago

TOPPView: show prefix ion (usually b1) when creating theoretical spectra

cbielow opened this pull request 2 months ago

fix displaying an empty path on the console during first cmake call

cbielow opened this pull request 2 months ago

Enable Subset Neighbor Search (FDR)

cbielow opened this pull request 2 months ago

Question: UNASSIGNEDPEPTIDE in tsv output of TextExporter(consensusXML)

jonasscheid opened this issue 2 months ago

Automatic FWHM estimation in FeatureFinderMetabo

YasinEl opened this issue 2 months ago

Configure so that TOPPAS documentation is accessible from help tutorial menu