Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/OpenMS/OpenMS

The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS

[FIX] MRM

bf41e70e8328a8af6eebbf1bae503ca16ac2447e authored over 5 years ago by oliveralka <[email protected]>
:[FIX] add exceptions back

0f5d264cf11b6ae50f3b852a71bb95eee79aeebb authored over 5 years ago by Timo Sachsenberg <[email protected]>
[FIX] requested changes

b2538da90ca026cae2c0eafe1a9fdbbb32711ce9 authored over 5 years ago by oliveralka <[email protected]>
Merge pull request #33 from pscheil/QC_dir

add new directory QC

7a5fdd4723a811ecc1ff18a0f294084262a9cc74 authored over 5 years ago by Chris Bielow <[email protected]>
add new directory QC

f354c81972e67cc766b8424370082ed9433d771c authored over 5 years ago by Patricia Scheil <[email protected]>
Merge pull request #32 from swewagner/gitignore

Gitignore for Clion build trees

65015514cb653162da051bf9ccfe6c7f6cfceb20 authored over 5 years ago by Chris Bielow <[email protected]>
clion build ordner hidden

27028b124ad07e0862f422e73186684d0de504a9 authored over 5 years ago by swew98 <[email protected]>
max charge reduced

ff0ab9e3981cb45ee51aaaa984c0b98fbb4d5bd5 authored over 5 years ago by kyowonjeong <[email protected]>
max charge reduced

9808e27a6ca1d143dc2fad89b7e19c1db4108554 authored over 5 years ago by kyowonjeong <[email protected]>
max charge reduced

98b87bd77abdf372589816efae5bfc073f433e81 authored over 5 years ago by kyowonjeong <[email protected]>
max charge reduced

b20c3f6cda951ab10c406c35aaf60ea7d3395008 authored over 5 years ago by kyowonjeong <[email protected]>
max charge reduced

f5aa80d548aa35b00cd887d6c8a41c228e2250bd authored over 5 years ago by kyowonjeong <[email protected]>
max charge reduced

c82a855621c8afe0b6147d670e203e6ae5660c81 authored over 5 years ago by kyowonjeong <[email protected]>
min charge bug fixed

c93c299a22064db96acd012b33dd546e6a8f1a7e authored over 5 years ago by kyowonjeong <[email protected]>
min charge bug fixed

21595f9ddca4465248cd8b5b5866dc86de244b32 authored over 5 years ago by kyowonjeong <[email protected]>
min charge bug fixed

4506f26fe2d503fecc19fe34fc36713f9ce81284 authored over 5 years ago by kyowonjeong <[email protected]>
min charge bug fixed

1888f10fb72d626b8a026af06bc66099b9c05883 authored over 5 years ago by kyowonjeong <[email protected]>
Merge remote-tracking branch 'origin/add/adducts_compound_osw' into refactor/AssayGeneratorMetabo

e83050e0447ddae94e0364b2c0274fcd35d66b41 authored over 5 years ago by oliveralka <[email protected]>
[REMOVE] converterMode

c932c8a0cd42cd9b52177b40ab0248879d0d4aaa authored over 5 years ago by oliveralka <[email protected]>
[FIX] unused variable ccplint

0d840af162c32d78d95228dfb4b05d82a5f77481 authored over 5 years ago by oliveralka <[email protected]>
Merge pull request #47 from OpenMS/develop

Update poshul/develop

3763b010f9d6b46d674d4c4e59a201252e61e630 authored over 5 years ago by Samuel Wein <[email protected]>
[FIX] tests

1389e6bc2b132ea6682cac18b7f89b7d673e5a5c authored over 5 years ago by oliveralka <[email protected]>
[FIX] CompoundName PQP

ec0920a6b68f5be63f7a4e9df89f055cce1a4403 authored over 5 years ago by oliveralka <[email protected]>
[FEATURE] NucleicAcidSearchEngine: collapse search hits generated from ambiguous variable modifications

5f763149c58accbf78645b86198832041ed8e331 authored over 5 years ago by Hendrik Weisser <[email protected]>
[TEST] smaller fixes and tests

197088a0e9aa0ff81833abf1c501cdbae380dc2c authored over 5 years ago by oliveralka <[email protected]>
FIX: initializeXCorrMatrix (#4005)

* fix: remove default initialization of the xCorMatrix when it is not used

* fix: removed .vs...

12f50eceb18036650af9e01acd802a271d349789 authored over 5 years ago by Douglas McCloskey <[email protected]>
memory save

750eca23e920f8d40c1e6a6a1b9c50f90007043a authored over 5 years ago by kyowonjeong <[email protected]>
memory save

d7d8a1d9fa1aaa7a2977f6bba632300c6bcfc8ea authored over 5 years ago by kyowonjeong <[email protected]>
standard protein dataset opt

496dc7f35fee71a063b45703553c45e7223a4421 authored over 5 years ago by kyowonjeong <[email protected]>
Merge pull request #4006 from poshul/poshul/hendrikweisser-rna-ms2-id

Poshul/hendrikweisser rna ms2

1d629f2d9df41cfa09306210a845f3c3e17dd483 authored over 5 years ago by Timo Sachsenberg <[email protected]>
[ADD] Adducts

bf890edf1140e3bbac588a4f0f5a33084c58f258 authored over 5 years ago by oliveralka <[email protected]>
standard protein dataset opt

1e757117a9d39cf0d2a4e3ebe97016df353586c9 authored over 5 years ago by kyowonjeong <[email protected]>
[NOP] Changed TOPP test parameters for NucleicAcidSearchEngine to use max_size=0 (ie, unlimited)

93b1b9e74b72254194d5f9eeaca4814879d5a6c4 authored over 5 years ago by Samuel Wein <[email protected]>
[TEST] add test for nullptr

81149835aa15919afafd5cf86e263f00751d43c1 authored over 5 years ago by Timo Sachsenberg <[email protected]>
Merge remote-tracking branch 'origin/develop' into refactor/AssayGeneratorMetabo

f02944f158715797f5ae55a249dbc41fd51bffeb authored over 5 years ago by oliveralka <[email protected]>
[ADD] Compound adducts to tsv, pqp

c4170c2d357045553586d2ca66fdd623618df7ee authored over 5 years ago by oliveralka <[email protected]>
[REFACTOR] use OpenMS::String functions

e739dd73b9251eaf7cae5e4e1606d63ca723b303 authored over 5 years ago by oliveralka <[email protected]>
Update ModificationsDB_test.cpp

4a2fcd9312c3f0e2997164c7cbf50626eabf23b3 authored over 5 years ago by Timo Sachsenberg <[email protected]>
set precision came back..

a8ff5e04ab931d04e577cba17737b685564bcd17 authored over 5 years ago by kyowonjeong <[email protected]>
Merge remote-tracking branch 'origin/develop' into update/SiriusAdapterOutput_rt_mz

da840443c91f23087d7cb4673169d1c7cf4b130d authored over 5 years ago by oliveralka <[email protected]>
[FIX] compare

5cf9128832822ad4ba6c94bb4cecec98cb2b9dec authored over 5 years ago by oliveralka <[email protected]>
Update src/openms/source/CHEMISTRY/AASequence.cpp

Co-Authored-By: timosachsenberg <[email protected]>

1d781096c9db60d422e2ae2f67dcfecb0adeea35 authored over 5 years ago by Hannes Roest <[email protected]>
Update src/openms/source/CHEMISTRY/AASequence.cpp

Co-Authored-By: timosachsenberg <[email protected]>

c1b3b93155779a15a9ee77fae1c89492d017cb74 authored over 5 years ago by Hannes Roest <[email protected]>
[fix] fixed max_length issue

dcb45f9f409440a4e29008d8d40d00ee9103e992 authored over 5 years ago by poshul <[email protected]>
[Update] fill corresponding fields in mztab output

20c58a70bacb9aff1881bb330766531b82ed09ca authored over 5 years ago by oliveralka <[email protected]>
[ADD] mz,rt,nativeID to mztab output

07ed5362423509a1086dbf44231ae0961f039540 authored over 5 years ago by oliveralka <[email protected]>
[DOC] installation manual for Qt5 (#4002)

* added flag -DQt5_DIR to the install-linux file

* Update install-linux.doxygen

* Update c...

0740c4019e1cd79864cc7cbd809afa32455e3421 authored over 5 years ago by Chris Bielow <[email protected]>
set precision came back..

467059cf23c38f3b70df8387c8f751e10aa32b07 authored over 5 years ago by kyowonjeong <[email protected]>
Merge remote-tracking branch 'origin/fix/ResidueDB' into fix/ResidueDB

470351739262291b086d6a297b69dd99ee408f04 authored over 5 years ago by timosachsenberg <[email protected]>
set precision came back..

ca350e363a8542a1f66e4beab633a2d629f5fa3c authored over 5 years ago by kyowonjeong <[email protected]>
MultiplexResolver now reports "not quantifiable" peptide features (#3992)

* [API] new out_blacklist output

* fill blacklist MSExperiment

* [INTERNAL] remove out_bla...

7d4cf2606965c8b271431c63547007bec5fc43ca authored over 5 years ago by Lars Nilse <[email protected]>
[FIX] update pyOpenMS tests

eff483cfd4c19b6ac0b2720c7c0343767d712493 authored over 5 years ago by timosachsenberg <[email protected]>
Merge pull request #30 from Waschi97/DOC_update

[DOC] changed package in Fedora install

6c638e5d91f01e55615b04132e2ae9d25a3611e0 authored over 5 years ago by Chris Bielow <[email protected]>
Merge pull request #31 from dominikschm/DOC_ergaenzt

[DOC] added flag -DQt5_DIR to CMake install docs

3c4969bfe6a084ebcaf24ba764aaef766a46603f authored over 5 years ago by Chris Bielow <[email protected]>
Update common-cmake-parameters.doxygen

41632a0a0e0b4ceb7e0f3f9c1328c2a9b213dcf1 authored over 5 years ago by Chris Bielow <[email protected]>
Update install-linux.doxygen

b9bbc86251408a443ed7d543b6fe87961df74c77 authored over 5 years ago by Chris Bielow <[email protected]>
set precision came back..

6362d3ba7d43b386f475a40b357f5c4d7efb1e2d authored over 5 years ago by kyowonjeong <[email protected]>
set precision came back..

10b2b973de093b3669b60105c9c18617a7a7e631 authored over 5 years ago by kyowonjeong <[email protected]>
[FIX] pyopenms-fix

29a4f160a649fffa68950740f731f39b82681532 authored over 5 years ago by Hannes Roest <[email protected]>
Merge branch 'feature/aaseq_fixes' of github.com:hroest/OpenMS into feature/aaseq_fixes

7c41046d1f7a1efe9746ed75134e5efcd4e577c0 authored over 5 years ago by Hannes Roest <[email protected]>
[FIX] code fix

809c2b711e20bdfeb5b446a14e46f4790c5981d0 authored over 5 years ago by Hannes Roest <[email protected]>
set precision came back..

20af45363430dd5e8ea53d00675c702297e609a8 authored over 5 years ago by kyowonjeong <[email protected]>
Final version. Harmonic artifact removal + speed up

84f22cdafedb40c11fce7f6c3c6170839a629dce authored over 5 years ago by kyowonjeong <[email protected]>
Merge pull request #3997 from biosustain/refactor/MRMFeatureFilter_messages_as_StringList

feat: MRMFeatureFilter failure messages as StringList

1eb75940538bacde836d8708d60e695a7bbcc184 authored over 5 years ago by Hannes Roest <[email protected]>
Final version. Harmonic artifact removal + speed up

a2b71c67a1e7e42f4670b3523b5570adf3ad3c1a authored over 5 years ago by kyowonjeong <[email protected]>
Merge remote-tracking branch 'JeeH-K/feature/TDdeconv' into feature/TDdeconv

2f2f5c7edea34a847f07ef691780a6b67f6645b8 authored over 5 years ago by kyowonjeong <[email protected]>
Final version. Harmonic artifact removal + speed up

6f40315dac0480e1ff7845faa4ab3bb7694b3f1f authored over 5 years ago by kyowonjeong <[email protected]>
added flag -DQt5_DIR to the install-linux file

7b8b0bfabf357f05f25a9c369befb6ef528b5d9a authored over 5 years ago by dominik <[email protected]>
Merge pull request #4001 from OpenMS/feature/remove_ne

Add not equal operator to remove peptide hits

88c5833544b45c3bc137220d289329f8134e2d97 authored over 5 years ago by Hannes Roest <[email protected]>
changed package in Fedora install

ef820facc6dc231150f78576b78d04a7805dbb19 authored over 5 years ago by TomW <[email protected]>
Add not equal operator to remove peptide hits

61a4068a61a333e1946f34c83e125462c96fc945 authored over 5 years ago by Timo Sachsenberg <[email protected]>
Update CrossLinksDB.h

d007f638b16714f7f39b469d4297d1a0990a534f authored over 5 years ago by Timo Sachsenberg <[email protected]>
[TEST] added tests from Feature/openms concurrency #3439

2a9df75f430832aa3fed6695d3d54948ce24b65c authored over 5 years ago by timosachsenberg <[email protected]>
Merge remote-tracking branch 'origin/fix/ResidueDB' into fix/ResidueDB

Conflicts:
src/pyOpenMS/pxds/CrossLinksDB.pxd

53ef63b04c9a9dc33c0168b6ff0e148058d65ed1 authored over 5 years ago by timosachsenberg <[email protected]>
[FIX, PYOPENMS] CrossLinkDB

2eda832d852f2c6198d16dfcc9987d1f676a8a1a authored over 5 years ago by timosachsenberg <[email protected]>
Update CrossLinksDB.pxd

47ef8daed0cb49f755d42727de4620d08855925d authored over 5 years ago by Timo Sachsenberg <[email protected]>
[fix] fixed max_length issue

9e4bf6a84a5b810400b0c4e4c09206e9f0de17fd authored over 5 years ago by Samuel Wein <[email protected]>
[feature] added max_size as a parameter to NucleicAcidSearchEngine

c9db527299b96fdf5ed550ad1a56f201471b002d authored over 5 years ago by Samuel Wein <[email protected]>
Merge branch 'develop' into feature/aaseq_fixes

3c859da840612b117b803f4eae2ad59c2f956493 authored over 5 years ago by Hannes Roest <[email protected]>
[FIX] fix for empty residue

1eca1fdc338d28dcfd6071193cb0721c3bde41ae authored over 5 years ago by Hannes Roest <[email protected]>
[DOC] use absolute masses where possible

4d548b25adaffc7383b14f42b5c31f3b61ce9ded authored over 5 years ago by Hannes Roest <[email protected]>
[FEATURE] use absolute masses where possible

aca89e48d07579807ae0024a3d0be893836cc36e authored over 5 years ago by Hannes Roest <[email protected]>
[FEATURE] use absolute masses where possible

53d6bf5b6346855b69d00a0dfeda55a8e46e389f authored over 5 years ago by Hannes Roest <[email protected]>
[FIX] pyOpenMS

a08fc89d1ff14f3feba4808f013b4188d87d1945 authored over 5 years ago by timosachsenberg <[email protected]>
Merge pull request #3996 from hroest/fix/aaseq

[FIX] fix AASequence string conversion

c7501b4a166ed07749c0acf3c3b51031099525ad authored over 5 years ago by Timo Sachsenberg <[email protected]>
[FIX] use STRING_SIMILAR

64f9543cb8570d88d95064d79bd44938a0618612 authored over 5 years ago by Hannes Roest <[email protected]>
[NOP] compile warning

8b1ced40fcec50238d9e565ed56e61b2172d1729 authored over 5 years ago by timosachsenberg <[email protected]>
Merge pull request #28 from swewagner/testbranch2

added myself as author

1e1d4c7ca3836bd3a9d61eac30f9a3105043b020 authored over 5 years ago by Chris Bielow <[email protected]>
added myself as author

71ff297f1e7b4fce9548f45bd12de898ab6f61ce authored over 5 years ago by swewagner <[email protected]>
Merge pull request #24 from pscheil/testbranch

added myself as author

d924f7f82a6433266d528e794d4f89c7b8019e14 authored over 5 years ago by Chris Bielow <[email protected]>
Merge pull request #25 from dominikschm/testbranch

Testbranch

6f834fd8c07890dd5b38b83c2960be715cdff7b0 authored over 5 years ago by Chris Bielow <[email protected]>
Merge pull request #26 from jschmacht/testbranch

added myself as author

1b559da2f8f5d7e406197e68ce0384cf58bb0925 authored over 5 years ago by Chris Bielow <[email protected]>
Merge pull request #27 from Waschi97/testbranch2

added myself as author

200e11916959d1a45be87f75bf5157de6ce63ed8 authored over 5 years ago by Chris Bielow <[email protected]>
added myself as author

9fbdbb085348e31d7cc3a59306ef2ee80849374c authored over 5 years ago by dominik <[email protected]>
added myself as author

9d773316f40fab8f42bf62980aaa1d05a68bbc3a authored over 5 years ago by dominik <[email protected]>
added myself as author

1ee4a6c5134b6e7527b87ee915e2b07fce9dedc6 authored over 5 years ago by pscheil <[email protected]>
added myself as author

ce70b2a301972f4f627327ee93ca9690316b3574 authored over 5 years ago by root <[email protected]>
[FIX] mode some unused (an potentially dangerous) methods private

bcc3ba8329eced815cf1731b1484fe7b67eec221 authored over 5 years ago by timosachsenberg <[email protected]>
added myself as author

7abbc3b3af14ea51869290542ead215efe7b3a94 authored over 5 years ago by TomW <[email protected]>
style: remove whitespaces at EOLs

e3434aa12aa552e0e02a950ec2098d73de4bcfdc authored over 5 years ago by Pasquale Domenico Colaianni <[email protected]>