Ecosyste.ms: OpenCollective
An open API service for software projects hosted on Open Collective.
github.com/OpenMS/OpenMS
The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS
# Conflicts:
# src/openms/source/APPLICATIONS/ToolHandler.cpp
# src/utils/executables.cmake
[REFACTOR] some cleanup of PeptideIndexing...
b1bde1639b16b2298fd363c0ff4897e2f2f9c490 authored about 5 years ago by Timo Sachsenberg <[email protected]>0329a791268120d3ea2aff24f7f3de24de4e70f0 authored about 5 years ago by Hannes Roest <[email protected]>
[FEATURE] FileFilter flag to remove empty spectra / chromatograms
090c7a8524235566f8a9d20ddd81374aca24962b authored about 5 years ago by Hannes Roest <[email protected]>992db94ce62d434b2d8753d0a373810d9b8b66e0 authored about 5 years ago by Hannes Roest <[email protected]>
e3821482674c7259d39610b8324ce77c1c226406 authored about 5 years ago by Hannes Roest <[email protected]>
[FIX] empty hits
0e1b1fa5388f6350be1f1c135c2a0743412d6335 authored about 5 years ago by Hannes Roest <[email protected]>2c9c2f416bbbc380902087e33fa23539b7cf7f0d authored about 5 years ago by Hendrik Weisser <[email protected]>
f276bfb5942c9c23d9735a64404bff71ec4ed9ee authored about 5 years ago by Hendrik Weisser <[email protected]>
d41f9bc1ab179bb67530e0cdd4d5f2895fd53f4d authored about 5 years ago by Chris Bielow <[email protected]>
da887ba269ccaead4b6b89c3f061a9e2f063c2e5 authored about 5 years ago by Hendrik Weisser <[email protected]>
63a39574c8e690f7c8b0d034443607d1c184ba7d authored about 5 years ago by enetz <[email protected]>
6729701dd04d74073d86725a89214cc487b4f0f2 authored about 5 years ago by enetz <[email protected]>
now no empty hit is added on resize
18ac7fd65e8d5ac5cd1d498e244fb7c70c4c983a authored about 5 years ago by Timo Sachsenberg <[email protected]>b10f57913a41908c928b551a7b8c410e0f8c1d34 authored about 5 years ago by Chris Bielow <[email protected]>
3cb3447ad826b03cb5fabe435a78b248ca6a7077 authored about 5 years ago by Timo Sachsenberg <[email protected]>
[FEATURE] some memory fixes for ProteomicsLFQ
f19fa2a96fe7fbe9843f3a4bd5957277c657491f authored about 5 years ago by Timo Sachsenberg <[email protected]>b0b4f3be968cd735af85966769234f5e9fa9b81f authored about 5 years ago by Hannes Roest <[email protected]>
f0635c9392616e8f2ae7cde35de305f0c4c76d0d authored about 5 years ago by Hannes Roest <[email protected]>
d1cf2b48796a57930bd20a934a3ef0398a0f63d6 authored about 5 years ago by Hannes Roest <[email protected]>
b3fb5183420d36bb327323feae78fdf69684ff58 authored about 5 years ago by Hannes Roest <[email protected]>
fc7abcb36231fd18c51d6916c78d02e3a218c715 authored about 5 years ago by Hannes Roest <[email protected]>
004a6f207040adcb86e54e99b0c4bb120f187b47 authored about 5 years ago by Hannes Roest <[email protected]>
f528bb71c4e6fe0b0e9cd7416db58525de384d8a authored about 5 years ago by Chris Bielow <[email protected]>
afa288ac292e2dd805df67966855702b5ff74474 authored about 5 years ago by timosachsenberg <[email protected]>
[FIX] make decoy estimation more robust
453bcd208db0a052da75e4c9ee1fd6623b1f4c4c authored about 5 years ago by Chris Bielow <[email protected]>52383e9524be68bc3c24f510b87459551da2ef6c authored about 5 years ago by Hannes Roest <[email protected]>
43d3b9f517b28d2311f216b50c810aa3aa92f2d6 authored about 5 years ago by Hannes Roest <[email protected]>
[FIX] wrong loop variable
02a005ca5aa005a287676522b8cfdd0e968a014b authored about 5 years ago by Hannes Roest <[email protected]>76c3945f109ef0e4c979b7a2a0099a82773c8840 authored about 5 years ago by timosachsenberg <[email protected]>
e13030351c679d6b3698e814f707f4489990f435 authored about 5 years ago by Chris Bielow <[email protected]>
[DOC] Fix broken PDF creation
c4943740c5fdea6fd787b02cce33ece1491c6975 authored about 5 years ago by Chris Bielow <[email protected]>"
! Undefined control sequence.
\DoxyCode ...}{0ex plus 0ex minus 0ex}\ifthenelse
...
"l.173 \end{longtabu}
?
! Emergency stop.
\multispan ->\omit
...
b8e786e2903fc9e120d68d20fc44be9024e70875 authored about 5 years ago by Chris Bielow <[email protected]>
[FIX] only write protein ids once in assay generation. remove decoys
d3f0fca5e4d72fc26ef1492be1bf75ac0b7cb7ad authored about 5 years ago by Hannes Roest <[email protected]>from targeted extraction
3b78f5f73b9357990cdecf2a24317de6bd6b0e9b authored about 5 years ago by timosachsenberg <[email protected]>[INTERNAL] consistent parameter name between header and definition in…
3ec4c5b47dbe8b042201eb0ff623ed6d795fcfbe authored about 5 years ago by Eugen Netz <[email protected]>
Very few fragment annotations were removed and some scores changed slightly.
Although the change...
7d34cbeb41b7dfa21bed8578c4a386b06fec9f4c authored about 5 years ago by enetz <[email protected]>
b752b302dc0136ce7e3df501db0c84cc7f5b34f7 authored about 5 years ago by Hannes Roest <[email protected]>
[STYLE] Improve EmgGradientDescent's methods names
ce79252bbc10154358d4f4fc602d3249c08013b8 authored about 5 years ago by Timo Sachsenberg <[email protected]>d0ab9a6b7f7d318106c036a13c8f6b0dae26cf8f authored about 5 years ago by Hannes Roest <[email protected]>
8a1ee71f405551962d8faa4215fb2b6bfbacde56 authored about 5 years ago by Hannes Roest <[email protected]>
changed the same parameter name in the corresponding pxd as well
735d2e40d6071421aea56a92c67ba0564df20916 authored about 5 years ago by Eugen Netz <[email protected]>9314faed23fe4c4713ee2aa3c5016738b4e66026 authored about 5 years ago by enetz <[email protected]>
[FEATURE] New features in Deisotoper
e4da9a7364914cefb59c9091b4e6007c6744861c authored about 5 years ago by Timo Sachsenberg <[email protected]>QualityControl TOPP tool
43848d97ef7aeea958ba62c28d53739914de3a2e authored about 5 years ago by Timo Sachsenberg <[email protected]>f731824bc709a6121b64018d644355f3712aed2b authored about 5 years ago by Pasquale Domenico Colaianni <[email protected]>
8c68a23552386b88b931db73aed5b6796485ddbe authored about 5 years ago by Hannes Roest <[email protected]>
2f808495e1d04dee8b0cfec7a3c6e4591f2756c3 authored about 5 years ago by Hannes Roest <[email protected]>
6b0c577a4c555ab6d348e81beb13780b77fe8034 authored about 5 years ago by Hannes Roest <[email protected]>
f92e80e2ecb33953a03446146d0a075a7a37ec93 authored about 5 years ago by Hannes Roest <[email protected]>
ebd283a547cf8e3ba62a93dd0209ac8713751ee4 authored about 5 years ago by Hannes Roest <[email protected]>
ba890153395d30a6dfaea3b8ae5fa4b207d9cf56 authored about 5 years ago by Chris Bielow <[email protected]>
style: Move some methods from protected to public
9c15f0a048e30741e88d0df2c68c123555451b23 authored about 5 years ago by Pasquale Domenico Colaianni <[email protected]>ae6e394038813e86a453bc5e6649d1ec8ac2aa1d authored about 5 years ago by Chris Bielow <[email protected]>
470a4a6f2d310bbfedf24f304bb28c94733de755 authored about 5 years ago by enetz <[email protected]>
434573372744e521c625c807f7ee7d8b9c4bc1c4 authored about 5 years ago by enetz <[email protected]>
There was a slight error in summing up intensities in the old code.
714e8cf348d85d4e9058c3e21b4748e44014c353 authored about 5 years ago by enetz <[email protected]>
Removed the old deisotoping function that was used exclusively by OpenPepXL.
OpenPepXL now uses ...
The Deisotoper can now annotate the number of peaks in each isotopic pattern. The averagine mode...
3966367ecef16e7d77c10e23ab4c6473783970cf authored about 5 years ago by enetz <[email protected]>cce21d597fef0d9522a3662cb785b3e8a9278168 authored about 5 years ago by Chris Bielow <[email protected]>
396562fdf42324b5b70109a73e5ddeb1acacc05c authored about 5 years ago by Chris Bielow <[email protected]>
7b33726b76ace66adb801e7cd7eddfcfd2d75a9e authored about 5 years ago by Chris Bielow <[email protected]>
5a78da0cdc13943f410d22a19f3579339e7fc695 authored about 5 years ago by Chris Bielow <[email protected]>
e17014b5fade36ef632fe5fe5c76d594337f2a2b authored about 5 years ago by Chris Bielow <[email protected]>
b4df349de9787cad4321003916dd93f8db4dc5b1 authored about 5 years ago by Hendrik Weisser <[email protected]>
60fd50aa77271476f93f0a3087dc49b843c338e0 authored about 5 years ago by Hendrik Weisser <[email protected]>
f1792677696b7f4e22f777996e559f144baa6cbe authored about 5 years ago by Chris Bielow <[email protected]>
Feature/osw cleanup
549bd35956d7cc2ae448dca519f2b2af9bb5358f authored about 5 years ago by Timo Sachsenberg <[email protected]>[FIX] ChromeleonFile can handle commas as thousands separator
3a4008c0e70126111ece90e3c5330aca14ba79dd authored about 5 years ago by Hannes Roest <[email protected]>d0947f3529fdd09491e2c151b0b43023a23e660c authored about 5 years ago by Chris Bielow <[email protected]>
d58fbf5246048e9d545ef1f2eb7bc6bbfa5320ce authored about 5 years ago by Chris Bielow <[email protected]>
4116b3c613c7c823048bbc3b481d413bb63aa38a authored about 5 years ago by Chris Bielow <[email protected]>
5fc45fd7095111ab80858467ad583780203afa98 authored about 5 years ago by Pasquale Domenico Colaianni <[email protected]>
b1a28e0718d08898c2cd1389361ca668b1c230e4 authored about 5 years ago by Hannes Roest <[email protected]>
5dbb2665a9925fd1b51573979fa8e4fe903ac398 authored about 5 years ago by Hannes Roest <[email protected]>
20bd417fb9fba53362f154c850f0ad480762fc4e authored about 5 years ago by Hannes Roest <[email protected]>
7c71b2d76304580429aa859528dce320c8ef7e03 authored about 5 years ago by Hannes Roest <[email protected]>
61204646ab676b1647b24a986d618cd2818f502a authored about 5 years ago by Hannes Roest <[email protected]>
9acd16c7a407c0c52012734b1c7bea6c9be6c485 authored about 5 years ago by Hannes Roest <[email protected]>
0c73a6d738d4682d40329e75194c965778a4d685 authored about 5 years ago by Hannes Roest <[email protected]>
bb5cc49e8b777db6d379f64339859e995743dc4d authored about 5 years ago by Hannes Roest <[email protected]>
e5f6b847bf8661d46ceb0550c73062c9958d6097 authored about 5 years ago by Hannes Roest <[email protected]>
8cc4e8896f27ddc1603d261d8eef8d62b8631ab1 authored about 5 years ago by Hannes Roest <[email protected]>
0ea7474ec281ac95e267ad428881f601e68c4619 authored about 5 years ago by Hannes Roest <[email protected]>
ce65cd2e282a1c973ca26da59effc9fbdf02497c authored about 5 years ago by Hannes Roest <[email protected]>
0af5eb1fe0051e50d1389a9a384f321f2a01d63d authored about 5 years ago by Hannes Roest <[email protected]>
3d821f5f6bdc6a3bb04383704a220bd1be26e37e authored about 5 years ago by Hannes Roest <[email protected]>
1ea92a262f0388f5410cf12ae12aa127fd1e9292 authored about 5 years ago by Hannes Roest <[email protected]>
166dbece4637d1ef983fed2ad977a127baf3dd93 authored about 5 years ago by Hannes Roest <[email protected]>
d370b7a90de1a2641d25636ccd9af35109f49cbb authored about 5 years ago by Hannes Roest <[email protected]>
f482f29ea6029910830e779a74badec73f098aac authored about 5 years ago by Hannes Roest <[email protected]>
e25e260f4d55b7c4b39f8c4bda0f0acc8fd0d8ec authored about 5 years ago by Hannes Roest <[email protected]>
375f6a7d7d2cc0eb6106417b638335f2304fd86d authored about 5 years ago by Hannes Roest <[email protected]>
d900923e2f7cf1828cd9df1d275368c96d3f1483 authored about 5 years ago by Hannes Roest <[email protected]>
3cc707e6d1ea2a72f4097090b77c93dcec208666 authored about 5 years ago by Chris Bielow <[email protected]>
57e0c606a25113ef1a3988f9a1bd700f22d4d980 authored about 5 years ago by Chris Bielow <[email protected]>
9bb8a3c4b0f9b4627ac4882f7146fc60a64a9751 authored about 5 years ago by Chris Bielow <[email protected]>