Ecosyste.ms: OpenCollective
An open API service for software projects hosted on Open Collective.
github.com/OpenMS/OpenMS
The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS
bf584d0410045f44f01e2e3ea76a99bc6a347ea3 authored almost 5 years ago by Hannes Roest <[email protected]>
Feature/manylinux2014
5e9988c5f4d53145411b2acd700c92e338b8e9b4 authored almost 5 years ago by Hannes Roest <[email protected]>ce21c9fe42209aeebe00407f42256826319aea28 authored almost 5 years ago by kyowonjeong <[email protected]>
4ae239a316bb7335f1dec78bf225f7ac661bdec0 authored almost 5 years ago by M Bernt <[email protected]>
5603b46c24f4855f0b31dc8c574b442651634f13 authored almost 5 years ago by kyowonjeong <[email protected]>
7a11bc8a843a5c8fa03f2d84e92859034e4ecf2d authored almost 5 years ago by marcusL <[email protected]>
1a6168c5fd77183bec9182d44e9735d4361975a2 authored almost 5 years ago by enetz <[email protected]>
4885660a6a837d96ac7bc1a1fc7ce174f8214e1c authored almost 5 years ago by enetz <[email protected]>
12ee26dda7402ed2a6682fc474c8de8564b8dcc8 authored almost 5 years ago by Hannes Roest <[email protected]>
f0cd6c66fbd2241c99e74c3670a861d3b8fbd6a3 authored almost 5 years ago by Hannes Roest <[email protected]>
a7a1ab51ace486e8819233438effc7135285eed4 authored almost 5 years ago by Hannes Roest <[email protected]>
6aaf0a88849d2ad15b74f409a4f7f18e14bfb700 authored almost 5 years ago by kyowonjeong <[email protected]>
* [FEATURE] speed up
Substantially speed up "clear" operations for certain workloads then
wh...
ae25c1f818c87dff2f363f9124a2fa65270a3583 authored almost 5 years ago by Eugen Netz <[email protected]>
275fe77eace45938bb6a03b940c4a1fd74519e62 authored almost 5 years ago by marcusL <[email protected]>
Adjusted the format to fit the 2.4 changelog
Added new parameters to OpenPepXLLF that were adde...
902d437e544b853b55009fe9d65edd4f98dcd471 authored almost 5 years ago by Hannes Roest <[email protected]>
a03d2ea9899b2fccf66a344b427f5ce073b5f042 authored almost 5 years ago by Timo Sachsenberg <[email protected]>
2fcad6f55973a82d300cb587f00c836fdb8a3869 authored almost 5 years ago by Timo Sachsenberg <[email protected]>
Update AUTHORS
cb1746364fa5d16cecc76a45f7d039b701fa0bbc authored almost 5 years ago by Chris Bielow <[email protected]>bd8c1d265e5926367fc004042053b808098bc2f5 authored almost 5 years ago by M Bernt <[email protected]>
53f42bae6ea8d27c15da5aadd9f9ba0f078091c3 authored almost 5 years ago by M Bernt <[email protected]>
f85d31dc6d46f15d7448216234c02644a941ee7e authored almost 5 years ago by Timo Sachsenberg <[email protected]>
c652d1f1a29ab2dbe2e8b9f1a308a30cf13b1b9b authored almost 5 years ago by marcusL <[email protected]>
* Fix bug/TODO for reading full TITLE from mgf
* oops
6074b75d362c4d7534a3e8669708f26c53d798a0 authored almost 5 years ago by jpfeuffer <[email protected]>ModificationsDB::getInstance performance fix
4333e6d35932e0658b260519cfbcdf6ea641b62f authored almost 5 years ago by jpfeuffer <[email protected]>
according to the discussion in https://github.com/OpenMS/OpenMS/issues/2350
this should be repr...
since the file is not included in the distribution
I guess its better to make the argument mand...
* [PYOPENMS] NASequence / AASequence wrappers
- allow iteration
- allow random access with o...
27d8d6624b5d36f7c714e3ae52de481a748e73a7 authored almost 5 years ago by Hannes Roest <[email protected]>
5e02e0c4c6680b38b0cecaab0ab40fb702c3f1f8 authored almost 5 years ago by M Bernt <[email protected]>
[DOC] update docs for write_ini
73abccd8828b8c30e0beef47376819dcca281087 authored almost 5 years ago by Chris Bielow <[email protected]>a3573024d6b71f70bcfbd9780a6da422ef5b0db5 authored almost 5 years ago by Chris Bielow <[email protected]>
make diff parameter order consistent in tests
940f94480e01e0c2f441abc978a1cdf54d7763ed authored almost 5 years ago by Chris Bielow <[email protected]>d0391cce8e0ada92ec9f022d708c8b7dbd0668fe authored almost 5 years ago by M Bernt <[email protected]>
51ed3756036b96d500c4a50a4fe154eaf6907548 authored almost 5 years ago by jpfeuffer <[email protected]>
34be04b1d8578d6b2fa4f6ff1f42d2b6e7afc7d3 authored almost 5 years ago by Hannes Roest <[email protected]>
487b6257b737166521a919b379494c5162ef8bc2 authored almost 5 years ago by Hannes Roest <[email protected]>
e8929bb7a97c676257e5fb0c55d82f608e885415 authored almost 5 years ago by Hendrik Weisser <[email protected]>
a384d97c1704a83850c50729d6962413ead3a9d6 authored almost 5 years ago by Hendrik Weisser <[email protected]>
afc23b0ab0c5a526664229bc9b011d0e549dde66 authored almost 5 years ago by Hendrik Weisser <[email protected]>
cfccc8b44afe79b227901c02d9a099a1066cc885 authored almost 5 years ago by Hendrik Weisser <[email protected]>
228e638b573e0df96fe0ee24b9dbd72f5264dfda authored almost 5 years ago by Hendrik Weisser <[email protected]>
This reverts commit dc7b7f473f36df34b78a2832281e387e6c76612f.
f05fad706b5a0dfd5ccd2f9996328a3d5b27180a authored almost 5 years ago by Hendrik Weisser <[email protected]>f4ebbf45e07467e61f87437e85e7c59eb8d00f5c authored almost 5 years ago by Hendrik Weisser <[email protected]>
dc7b7f473f36df34b78a2832281e387e6c76612f authored almost 5 years ago by Hendrik Weisser <[email protected]>
therefor combine data and gnuplot script in one file
a89ee09e323ef799172cabe1496cdca4de38d6aa authored almost 5 years ago by M Bernt <[email protected]>3c747050d876cc92eda2157ddd986bd77cfae547 authored almost 5 years ago by Hendrik Weisser <[email protected]>
[DOC] FFCentroided: a bit clearer warning message
a61e786e1d70fc42156d0d5f669dee6ae729715c authored almost 5 years ago by Chris Bielow <[email protected]>follow up to https://github.com/OpenMS/OpenMS/issues/4461
7d134c45b676caf822a1c860edbd14cc66b2c334 authored almost 5 years ago by M Bernt <[email protected]>3078e748bbeafa5a5f805e84f726a5a424e61272 authored almost 5 years ago by Hannes Roest <[email protected]>
bb839e49935916e1a074b699abcd5ecb3eeec307 authored almost 5 years ago by Hannes Roest <[email protected]>
d6f3ef4f7f61a8714b94134e62f69edde7969ed4 authored almost 5 years ago by Hannes Roest <[email protected]>
- instead of reporting all modifications only report the first one (and
store flag if more tha...
0ba5914246784a537b439e10bf00622fe7bea9da authored almost 5 years ago by Hannes Roest <[email protected]>
store the ptr to the ModificationsDB once and re-use the ptr
7fb4afa45813f5ac670a7deec9d70f81c977cafa authored almost 5 years ago by Hannes Roest <[email protected]>- use only a single lookup in ResidueDB for the fast code path
70d8fb3a66def1ab82d893592bf8049ff4ce02c9 authored almost 5 years ago by Hannes Roest <[email protected]>OpenPepXL, OpenPepXLLF: remove xml from valid extensions
43a2f1cbcb232474476b8fb00eb4b2f20b6db4b7 authored almost 5 years ago by jpfeuffer <[email protected]>0f546aa9ca099ee06a3d3312eeeac79037ef53bb authored almost 5 years ago by Hannes Roest <[email protected]>
d2046bc790172e28521195ba205b1f9319fa2327 authored almost 5 years ago by Hannes Roest <[email protected]>
e8b565774845a27034e1a566dda2e878046a53e4 authored almost 5 years ago by M Bernt <[email protected]>
since https://github.com/OpenMS/OpenMS/blob/c19b545636e76a5770f095f944e0b196b9b56c82/src/openms/...
58073e076b28528a26474bd2097abe34ae035736 authored almost 5 years ago by M Bernt <[email protected]>5c61107507a74225106284a8036a5edb3d487f0c authored almost 5 years ago by M Bernt <[email protected]>
9851d0ee007f884fd26b35fbdf663fb26bcfd4ca authored almost 5 years ago by M Bernt <[email protected]>
* [PYOPENMS] fast access to Matrix
* [PYOPENMS] fast access to Matrix
* [TEST] add test an...
735441decb37d3d4501b682e45ac83d767b803f4 authored almost 5 years ago by Hannes Roest <[email protected]>b4b4da41e388ff054bae78a2e35efdd53d4b8139 authored almost 5 years ago by Hannes Roest <[email protected]>
- allow iteration
- allow random access with operator []
- fix RibonucleotideDB
7903ff3aeb81aa36362c51e874c34821eb7659e8 authored almost 5 years ago by JeeK <[email protected]>
* merge: merged upstream develop
* fix: removed .vs
* fix: small bug identified in accessi...
23906894a689fb82db5f682481021c663d841078 authored almost 5 years ago by Douglas McCloskey <[email protected]>
* Warn about VS2015 and VS2017 due to OpenMP bug
* Some small fixes
* [PYOPENMS] fast access to Matrix
* [PYOPENMS] fast access to Matrix
e392c5c2ed6a0bc280bc527882d41ceb64534e98 authored almost 5 years ago by Hannes Roest <[email protected]>ff37d63d44abd1c3f05c6a1807ffbe4b58f8782c authored almost 5 years ago by kyowonjeong <[email protected]>
0551ece61b9dae719bbe1bb5e12b7af0a53fb698 authored almost 5 years ago by kyowonjeong <[email protected]>
de4e80c2c1e7694a0e83cdeaf668ae4e8163f590 authored almost 5 years ago by kyowonjeong <[email protected]>
[FIX] use faster implementation of residuesMatch_
c1981c3a14ed0c296b638fcf61378a96a000fceb authored almost 5 years ago by Hannes Roest <[email protected]>[FIX] bugfix
0353cb58b2f93428ba897a28a127778d5e7c1ec5 authored almost 5 years ago by Hannes Roest <[email protected]>5c0fe1aa4b12164e25bd03f5c2d1faf091a8d8ca authored almost 5 years ago by Hannes Roest <[email protected]>
efffc40fe158b9a982e00a66e8203f105bf36959 authored almost 5 years ago by Hannes Roest <[email protected]>
230001b7bd6b0b4c4186c9d722b1f71a445ba22c authored almost 5 years ago by Hannes Roest <[email protected]>
89e429d289cce4c4dde15ca8384a2d3107e1131d authored almost 5 years ago by Hannes Roest <[email protected]>
2e3f0113f8b8a07af224c110af435b6f4c1510ca authored almost 5 years ago by Julianus Pfeuffer <[email protected]>
1e873f06affede372263da8564ddd81992a93883 authored almost 5 years ago by JeeK <[email protected]>
c4c1c993c0dd5ad7e2b6e69563622610b965a17d authored almost 5 years ago by JeeK <[email protected]>
c434e978f86d1b3d5f397937f2e3ccfb8b34b53e authored almost 5 years ago by Hendrik Weisser <[email protected]>
665ca9616ce6ca1059e39fb92980058b23d9479f authored almost 5 years ago by Hendrik Weisser <[email protected]>
9efb8745397d03b33b3cd08284974008c42cbb4c authored almost 5 years ago by Hendrik Weisser <[email protected]>
5bdac4422ee09fa2e31e100887af5e2cf6f0c530 authored almost 5 years ago by Hendrik Weisser <[email protected]>
2a654658f91500d21a92d14c2720b344842b8540 authored almost 5 years ago by JeeK <[email protected]>
e31ccc5fe282e5d21f8c200f84715bb8f7b97087 authored almost 5 years ago by JeeK <[email protected]>
de5a443f9d43c3e1d80c853febfa67b5936d99e6 authored almost 5 years ago by jpfeuffer <[email protected]>
315cdcec4e623a50b27e0f1d1233a9a17486d393 authored almost 5 years ago by Hendrik Weisser <[email protected]>
RTEvaluation add missing argument
c19b545636e76a5770f095f944e0b196b9b56c82 authored almost 5 years ago by Hannes Roest <[email protected]>1386e6fad450daea981f9a22ae55664b4a23bb8c authored almost 5 years ago by Hannes Roest <[email protected]>
8cc81674f88aefbbc45274a77d1389b551076f34 authored almost 5 years ago by jpfeuffer <[email protected]>
652b3adf3fb41d5be82def32e3a5caa85f18c1bf authored almost 5 years ago by Hendrik Weisser <[email protected]>
4ce809c5be3852358876b159523321b33d48d741 authored almost 5 years ago by jpfeuffer <[email protected]>
64c28581dc480eb88947a89ad15a0e1ce3fb32a0 authored almost 5 years ago by jpfeuffer <[email protected]>
[FIX] make decharger safe for eval order of string manip. stmts
f34dd371f49e93a1183fbb98764380545cd814f8 authored almost 5 years ago by jpfeuffer <[email protected]>
- the `-out` argument was unused
- output is only generated if swath files are given
- make it...
* FileMerger: allow fasta output
* Update FileMerger.cpp
* Update FileMerger.cpp
Co-aut...
2220b925b7f04d4b49f35f09bfe31aa499e97529 authored almost 5 years ago by M Bernt <[email protected]>