Ecosyste.ms: OpenCollective
An open API service for software projects hosted on Open Collective.
github.com/OpenMS/OpenMS
The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS
# Conflicts:
# src/utils/ProteomicsLFQ.cpp
49d3475dfdc151f363b887b8f3e265703c7d1fee authored over 4 years ago by Julianus Pfeuffer <[email protected]>
* [NOP] added additional checks to prevent wrong order of input files
* Update ProteomicsLFQ....
26e303734412ac2c0fe45fcb000ac9bd6e6177a6 authored over 4 years ago by Timo Sachsenberg <[email protected]>17abc34264945d0fecc08cb39e46cb02767bf463 authored over 4 years ago by kyowonjeong <[email protected]>
3a82b6af26d014d9e95aa6346e399f559a8e5438 authored over 4 years ago by Julianus Pfeuffer <[email protected]>
- use mutable ref to append proteins
81c98d49a0158a1f50a08faf614770510346a3f4 authored over 4 years ago by Julianus Pfeuffer <[email protected]>- fix handling of proteins without PSMs in features
- make writing of mztab protein header safer ...
0c7004c53e131aa4e6b5262a2ca0625ae2a19ab7 authored over 4 years ago by Douglas McCloskey <[email protected]>
b4a65b9291948bf35be0a215f1ce38f7a25cfefe authored over 4 years ago by kyowonjeong <[email protected]>
* [FIX] add fall-back if alignment not possible
* Update ProteomicsLFQ.cpp
9dbbeb3e0dfbae699e43d2670b6194cdf8c4fbb8 authored over 4 years ago by Timo Sachsenberg <[email protected]>MS1 std works great (15 spectra overlap)
1af335a19a805ac19bd33b6d523af29eb2bf0de9 authored over 4 years ago by kyowonjeong <[email protected]>c6aeba94b3bd26b06e33ae1bc40c68b553a76e1b authored over 4 years ago by Chris Bielow <[email protected]>
56ca5e1f56b1aa52cdcd450ee84690318acdb817 authored over 4 years ago by Douglas McCloskey <[email protected]>
ab59ebf875b19c99310160d3fa6066cc27bf217f authored over 4 years ago by Timo Sachsenberg <[email protected]>
f95b73554b7ee55163fd6af421171c36855461d7 authored over 4 years ago by Douglas McCloskey <[email protected]>
fdf74d5f45f62dc9d77f75030b63660d5d1d44cc authored over 4 years ago by Douglas McCloskey <[email protected]>
767d477ddf68cc401bbf64d39aa54a9ff9e15d47 authored over 4 years ago by Douglas McCloskey <[email protected]>
0dadf754d6bcaf3ab27e0063edb5288ea4fc4cf6 authored over 4 years ago by kyowonjeong <[email protected]>
bbab96ac390e4a9e8350a18976468f49d69c6112 authored over 4 years ago by kyowonjeong <[email protected]>
* [FIX] test presence of files in input file lists
* add skipexists check to Input file lists
40f33a866798f9eaa86849864f70bdb0cf507592 authored over 4 years ago by Timo Sachsenberg <[email protected]>7f2b7875b85e43c8727e529e8f3f720640a43cfe authored over 4 years ago by Timo Sachsenberg <[email protected]>
MapAlignerIdentification: option to use "identity" transformation when data is missing
e537b4410223a29be6661bd52474bf39d780d08b authored over 4 years ago by jpfeuffer <[email protected]>501f67d7d536dc9f3583bd976d881d5bb1930e2a authored over 4 years ago by Timo Sachsenberg <[email protected]>
Update Comet on non-Win in THIRDPARTY to match bugfix version.
82d5e406d04ada29d7ffde334d722c72f0281faa authored over 4 years ago by jpfeuffer <[email protected]>* MassCalculator: output is csv
* MassCalculator: set input type to tsv
* MassCalculator: ...
9dbd68be524bf7781dd253a2a12b9fdb476941de authored over 4 years ago by M Bernt <[email protected]>038f88752cb863ec2478fc8c3c2361096e72e8a6 authored over 4 years ago by jpfeuffer <[email protected]>
8ecff460d365c35d37abc25afb0bce0ba110b17a authored over 4 years ago by kyowonjeong <[email protected]>
c589a102c4536f1e9b6ef0ff1a9417abef31e395 authored over 4 years ago by kyowonjeong <[email protected]>
20934d4e2ae478d911ef67e18783405cd4ed2a06 authored over 4 years ago by jpfeuffer <[email protected]>
support QC of labeled experiments (iTRAQ/TMT)
9c6c486be250e2b743bd0939db0cc33586866a03 authored over 4 years ago by Chris Bielow <[email protected]>23cbe96f02c278b9731922ffff8478718a38b135 authored over 4 years ago by kyowonjeong <[email protected]>
040a80673bbb1f2b56a4c840b2437ffe5d4da6ce authored over 4 years ago by Douglas McCloskey <[email protected]>
6c82f4a062a21355748f97368f372f03474cbc34 authored over 4 years ago by Douglas McCloskey <[email protected]>
283509440748b6620064c6c283a2eed65da91e14 authored over 4 years ago by kyowonjeong <[email protected]>
fb19a79818546ffed262e756eb647d0c73c635ad authored over 4 years ago by kyowonjeong <[email protected]>
5aed0953110b91282b22d7c32e6bcfb24b881157 authored over 4 years ago by kyowonjeong <[email protected]>
d8baf25d1fb1da361fffcceb0dff8a31102f95c9 authored over 4 years ago by Douglas McCloskey <[email protected]>
226be3f9cfeb03c99910201b2a59b5e7bc078789 authored over 4 years ago by Douglas McCloskey <[email protected]>
2856eeba7c3eed96d7bf5da99418ffe9e4b6458d authored over 4 years ago by Douglas McCloskey <[email protected]>
* [FIX] limit double precision to 17 digits during write
* little fix
* revert only real s...
366944c4ae238bd1a309cb724e58e5936ebe8b6e authored over 4 years ago by jpfeuffer <[email protected]>1f8f1dbb52299e463e642721292bbcd792e8ae4b authored over 4 years ago by Douglas McCloskey <[email protected]>
3733054e94b9cca57f1977dc50852b4e013fc9ce authored over 4 years ago by Douglas McCloskey <[email protected]>
099f230334d1b7063465e3ae3a3391b57ee2f8fc authored over 4 years ago by Douglas McCloskey <[email protected]>
b3ced34234a4e83dffe662a73d50e6cc5fb39a31 authored over 4 years ago by Douglas McCloskey <[email protected]>
183aabd5ca968651be8db4f57dc8289067a79635 authored over 4 years ago by Douglas McCloskey <[email protected]>
af092b8082304cb3655ae25c2289f0837155ab51 authored over 4 years ago by Douglas McCloskey <[email protected]>
9b51739974d709845229ac0056c69d4b9205f266 authored over 4 years ago by Douglas McCloskey <[email protected]>
f33224acefca6861b170153841fc74809cb22f56 authored over 4 years ago by Douglas McCloskey <[email protected]>
d9d5d11e893b1c600d7484b5fea3a86f7724fa3e authored over 4 years ago by kyowonjeong <[email protected]>
6b83c2b20dc3b18ca5bf88e15e439e9effdf96c0 authored over 4 years ago by kyowonjeong <[email protected]>
cbb86707f4cd011b7e01860dc699afcf5e7b865f authored over 4 years ago by Douglas McCloskey <[email protected]>
aab3d7cb76659ae80588d0611598ddb9a33b9faf authored over 4 years ago by Douglas McCloskey <[email protected]>
08802f1f2a926b2443a3e256bfe94ccad852add6 authored over 4 years ago by Douglas McCloskey <[email protected]>
d77d33cb1012305502f24a41cb74fc6312dcefd5 authored over 4 years ago by Douglas McCloskey <[email protected]>
ed22cc8442d41ab47a5b0b50d5a70fdd6f8b8635 authored over 4 years ago by Douglas McCloskey <[email protected]>
e36685cf1e7438b7879735b611076df2e8a97d20 authored over 4 years ago by kyowonjeong <[email protected]>
bd79af9c66959872175d798b786c91142a23860d authored over 4 years ago by kyowonjeong <[email protected]>
* [TEST] test stub to reproduce failing plfq if requant is enabled
* [FIX] requantification
...
999c2a66afd1c70639642066051e31a8e77765fa authored over 4 years ago by Douglas McCloskey <[email protected]>
1c4d0434febe062a1e71fce557084ae550492286 authored over 4 years ago by Douglas McCloskey <[email protected]>
2b16be624d8223f7580e5a0658935659df61712e authored over 4 years ago by Douglas McCloskey <[email protected]>
b8732c6bfbbf9a10d769d0bdb5d26eabf011c0e2 authored over 4 years ago by Douglas McCloskey <[email protected]>
6e8181be66b5b7fa36e55565b4725c8a431fd67c authored over 4 years ago by Douglas McCloskey <[email protected]>
f37f72dc24474aada6128501adb9ea47b25e25e9 authored over 4 years ago by Douglas McCloskey <[email protected]>
b0d99021486f91c1f47d8ac5dd3382977e498106 authored over 4 years ago by Douglas McCloskey <[email protected]>
57da84b665a5ab484e87f032cebb760d47f25b65 authored over 4 years ago by Douglas McCloskey <[email protected]>
ba4a57e3a014dbf6879da10beb11ebdcce27ae33 authored over 4 years ago by Douglas McCloskey <[email protected]>
89f66cf03ad5542dbd672bb500fb1a33a6613706 authored over 4 years ago by kyowonjeong <[email protected]>
3c00a9f2e59a2f5f2e7e917ff858649e439395c1 authored over 4 years ago by kyowonjeong <[email protected]>
8310148f80962ae81b02fba0505a0c7dee7a25d9 authored over 4 years ago by kyowonjeong <[email protected]>
d32491e183c55f0c7334ac0a7651f112beb39465 authored over 4 years ago by kyowonjeong <[email protected]>
* wrap static method in TransformationModelLowess
* Update TransformationModelLowess.pxd
I...
25c468e571e62c6a5d54a20a39d8a7b2dd110b3f authored over 4 years ago by jpfeuffer <[email protected]>* [FIX] Do not fill spectrum data and check all spectra for centroided in Comet
* Update Come...
3ec3c246b554dd3f633ba7462f66aea93325102d authored over 4 years ago by jpfeuffer <[email protected]>8b6078293ee21190509066e1d38176530f229a48 authored over 4 years ago by kyowonjeong <[email protected]>
8929c83b311705e7683e68b4aaaae75e11050d83 authored over 4 years ago by Hendrik Weisser <[email protected]>
acc4b6e04d2ab2856d4df62fa7e39d99c289c02f authored over 4 years ago by kyowonjeong <[email protected]>
185db9989ee1225ab1a0c6a80615b7f533d0185f authored over 4 years ago by Hendrik Weisser <[email protected]>
46115cce5bfeae27b05a9c5132a40506439d568c authored over 4 years ago by kyowonjeong <[email protected]>
File name fix
c939941cb9fb2135d8d8b0de4ebec4fb99ccbc99 authored over 4 years ago by Timo Sachsenberg <[email protected]>b688284bac1c44648918ce37365e3891dd61f562 authored over 4 years ago by Hendrik Weisser <[email protected]>
f6528c95c553e9a0ec7013556f8c747f5ca6861a authored over 4 years ago by Timo Sachsenberg <[email protected]>
7ae2cdb8782837175efd7aaf632c7975388d71d9 authored over 4 years ago by kyowonjeong <[email protected]>
7ba9f6a121595a4e823788f80cc109453a2cb353 authored over 4 years ago by Hendrik Weisser <[email protected]>
853ac873fc9a092d9366eeb367183a71222902fc authored over 4 years ago by kyowonjeong <[email protected]>
[DOC] extended documentation of experimental design
68e9486941a0b6f86b8ffa4bf5f9265395088bc6 authored over 4 years ago by Timo Sachsenberg <[email protected]>320917e2c1c36431820b2ae335c9595834a17afa authored over 4 years ago by Timo Sachsenberg <[email protected]>
378d725b495a2590b01d88fc9e87b1decf0162a8 authored over 4 years ago by Timo Sachsenberg <[email protected]>
6874221ee2300f4226c6c992323fdcf413de4f11 authored over 4 years ago by kyowonjeong <[email protected]>
dfa091ae1c158bd1d937710dce09a12f54210881 authored over 4 years ago by Timo Sachsenberg <[email protected]>
a1e2ea79ba1091e0d34dff91640dd3c79c08a51e authored over 4 years ago by Timo Sachsenberg <[email protected]>
f4c42d816270dccd14e125cc0b73e4e6b2b88fff authored over 4 years ago by Timo Sachsenberg <[email protected]>
65f4a897d6c7ca965ee6e6177e4f8c1371a0bb50 authored over 4 years ago by Timo Sachsenberg <[email protected]>
b81ef68525a14e0c7421d83edbcd90c28e1e8d71 authored over 4 years ago by Timo Sachsenberg <[email protected]>
dd57a1a6b0a9d9b5a285e0f45bd4dfb1ce6095f9 authored over 4 years ago by jpfeuffer <[email protected]>
52b0efde32d84397dfebd8f8460783dd103ad2c3 authored over 4 years ago by Hendrik Weisser <[email protected]>
d6a3db7d3e900b81134fda3214b4e743dd9682a9 authored over 4 years ago by Hendrik Weisser <[email protected]>
3f680d5e1693de00b05dd8d4276a9edde7942692 authored over 4 years ago by Timo Sachsenberg <[email protected]>
e7fd23c324710822c6f242ef72f146534af73fee authored over 4 years ago by Hendrik Weisser <[email protected]>
d2ed1ea6396bace8d47f9946e935ddd8c08a1f03 authored over 4 years ago by Samuel Wein <[email protected]>
318fe680e78d3ac16d820bc4dda260810c20ba72 authored over 4 years ago by timosachsenberg <[email protected]>