Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/OpenMS/OpenMS

The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS

FLASHIda interface polishing...3

0a3a9231eb8d4e4196e11404791d4badc1dbe119 authored over 4 years ago by kyowonjeong <[email protected]>
.

cd9297feb35a521b451e808f5ff8e015641933de authored over 4 years ago by KyowonJeong <[email protected]>
.

af36e953652783570bc17f929f736b4bdc16a782 authored over 4 years ago by KyowonJeong <[email protected]>
debugging

1abba7c16af7580e4ef1502d30cbb5ca0ac46e94 authored over 4 years ago by KyowonJeong <[email protected]>
Merge pull request #4806 from OpenMS/fix/ffidchunks

[FIX] colliding ProteinIDRun IDs

8a2b37925377ef15ce0dc6e118b75a040cda6faf authored over 4 years ago by Timo Sachsenberg <[email protected]>
Parameter bug fixed..

e2b80701db1e1ac56085d5b6b17fdb74542587e7 authored over 4 years ago by KyowonJeong <[email protected]>
FLASHIda interface polishing...2

50d2778efbbc1364fc8a4cb619753a7c19480a03 authored over 4 years ago by kyowonjeong <[email protected]>
[FIX] colliding ProteinIDRun IDs

594080823880d1bf0866c97e399696060dcfe901 authored over 4 years ago by jpfeuffer <[email protected]>
FLASHIda interface polishing...

1e16d0913f06730dfa6fd31f4e714106a6a8f94c authored over 4 years ago by kyowonjeong <[email protected]>
.

6b9a516148acccf537c80dd9bee35b8e2a9d2f66 authored over 4 years ago by KyowonJeong <[email protected]>
Merge pull request #4802 from jpfeuffer/feature/IDFilterCXML

[FEATURE] added filtering for protein group scores

afc0d61fcf28da02fce7eac08d3b8c3d29d438c7 authored over 4 years ago by jpfeuffer <[email protected]>
[TEST, FIX] started fixing MRMAssay class test after unimod update

244aba92805c2cfd50a967bb27400310cf1fb53f authored over 4 years ago by Eugen Netz <[email protected]>
extend param docu

4b2e3958abc9c0726769647a647d75a83545372e authored over 4 years ago by Julianus Pfeuffer <[email protected]>
DBSuit tests & BSA update

4e7455e41bf55252800813b49d86ec76397d076e authored over 4 years ago by Tom Waschischeck <[email protected]>
[TEST, FIX] updated class tests after unimod update

407a1ece0c1d40f24c95dc86819d32c20cb01ced authored over 4 years ago by Eugen Netz <[email protected]>
[TEST, FIX] updated XL-MS related test files after unimod update

f10c9376eb556c3e2993187edd692d112b3afa7e authored over 4 years ago by Eugen Netz <[email protected]>
[UPDATE] unimod.xml and unimod.obo

38aec189ed72a97098bed2eaa1b49fd008c5990d authored over 4 years ago by Eugen Netz <[email protected]>
Merge branch 'develop' into feature/IDFilterCXML

c817cee2031c5ddad37d1e71041088ec52aa0217 authored over 4 years ago by jpfeuffer <[email protected]>
one more affected test

e29e5d1220c55a8731ec9dd9fea3daad6b02ca2a authored over 4 years ago by Julianus Pfeuffer <[email protected]>
forgot test result

7a34ae437f0861496daea584c6e66b9ce3cf82e9 authored over 4 years ago by Julianus Pfeuffer <[email protected]>
added filtering for protein groups

74d9af2c5ca0385861034a2e1465dbe15a797d24 authored over 4 years ago by Julianus Pfeuffer <[email protected]>
DOT_PATH in Doxyfile.in fixed

aa86f1faedc8e808edbdd3cfc0550d382626c4c7 authored over 4 years ago by Tom Waschischeck <[email protected]>
db suitability docu using dot

9d92e9cf128a8e5b7be6593905863563fb9eecc8 authored over 4 years ago by Tom Waschischeck <[email protected]>
parameter bug fixed

e633bed543435818fedfbd2552e7334396d7b58f authored over 4 years ago by KyowonJeong <[email protected]>
FLASHIDa Parameter works

715e4d41d67bdd1919d85ffddd39fc60782e5156 authored over 4 years ago by KyowonJeong <[email protected]>
Deconv works but before test with real spectra

c199322863bce4899348ddb8068ea08db8291d4c authored over 4 years ago by KyowonJeong <[email protected]>
Merge pull request #4801 from timosachsenberg/fix/mztab

fix unequal column bug

4c62abe183c2e12bf40aed2151fc25c4edb9c3b5 authored over 4 years ago by Timo Sachsenberg <[email protected]>
BridgeClass works fine

641f669b68a81bd3c5a79a7fffdb621d8984f786 authored over 4 years ago by KyowonJeong <[email protected]>
test

9b67c6328273536f8aeb248df5f09d412ddbbf60 authored over 4 years ago by Kyowon Jeong <[email protected]>
fix unequal column bug

b616d2c6da7c48e3dae4fd671e20c311348d1b22 authored over 4 years ago by timosachsenberg <[email protected]>
Merge pull request #4795 from cbielow/toppview_chrom

Toppview refactor

86039efcdd30d4166e92aeda1b589dc1f4baeaf2 authored over 4 years ago by Timo Sachsenberg <[email protected]>
fix order of intialization

5756b23946716d88f396f3a210b7904a4e16f3a5 authored over 4 years ago by Chris Bielow <[email protected]>
end of kyowon window computer

c2afc177c6f76528ec587c89355a9cb0cbc084f9 authored over 4 years ago by KyowonJeong <[email protected]>
fix codefactor warning

76c549fba99eb6225dc9a992d562decddb0dfedd authored over 4 years ago by Chris Bielow <[email protected]>
Progressing..

154945e95ddc6534ecf5c80e9e2ea5a397dc4545 authored over 4 years ago by KyowonJeong <[email protected]>
FLASHDeconv runs on C#!! Class created and deleted!

e242f4dad548c823a8814f98447bcf69a7ceb25d authored over 4 years ago by KyowonJeong <[email protected]>
compile warnings

330363f17e1e6d8d4a234a3113f1a6d3b0c9150d authored over 4 years ago by Timo Sachsenberg <[email protected]>
FLASHIdaBridge functions created

b6d314a4a60bfdfdb20f871b70d4f7d3bc610067 authored over 4 years ago by KyowonJeong <[email protected]>
fix linker error

3e0592b4abcac8af28c809d1786f64453bc8f04c authored over 4 years ago by Chris Bielow <[email protected]>
Merge pull request #4799 from jpfeuffer/feature/IDFilterCXML

[Review] code review comments

5064d9e32002b9619a5310affd6431f00298f495 authored over 4 years ago by Timo Sachsenberg <[email protected]>
fix include

3b1e38d7b1d713d3c4cdeaf91eeb86e63b655962 authored over 4 years ago by Chris Bielow <[email protected]>
code review comments

1ea790c0fcbbe9b0464510516b24cdbff467cca9 authored over 4 years ago by Julianus Pfeuffer <[email protected]>
FLASHDeconvDll.cpp removed

d6776b386d55662f73679b5e45c15aa554f3e6cc authored over 4 years ago by kyowonjeong <[email protected]>
debugging - changes will later be undone

5ebafdd6463acdff3abfac831216bd91450f6223 authored over 4 years ago by Tom Waschischeck <[email protected]>
FLASHIda added

b138c33d0d10cd93b1d6a1cbb3995ad4018384c4 authored over 4 years ago by KyowonJeong <[email protected]>
Merge branch 'develop' of https://github.com/OpenMS/OpenMS into toppview_chrom

33bc1c9cdc2f01bc4e7efa179739db9d7273867f authored over 4 years ago by Chris Bielow <[email protected]>
Merge pull request #4798 from jpfeuffer/feature/IDFilterCXML

[Feature] id filter on consensusXML

d7cc95f5d90d680e5595616d8d0c5692634c70aa authored over 4 years ago by Timo Sachsenberg <[email protected]>
forgot test file

56bc25b11a4f4e5c959cfdb6f9ec342459fc0f6e authored over 4 years ago by Julianus Pfeuffer <[email protected]>
[FEATURE] Make IDFilter work on consensusXML

By extracting IDs, saving their featureID and mapping back. I did not check if EVERY filter crite...

30d43161ac5c6ff81a3d7776f7787e752c87f76a authored over 4 years ago by Julianus Pfeuffer <[email protected]>
more cleanup

8b74e4e3e21036bc5771fa33e0286e7cd806b9c9 authored over 4 years ago by Chris Bielow <[email protected]>
support decorated names for layers

12d666314a5be4e9415841c5be0f5b5a02ff117b authored over 4 years ago by Chris Bielow <[email protected]>
support tilings (fixing some bugs in TOPPViewBase code)

67cb183b41532e423d839621aed81d1d71f64c76 authored over 4 years ago by Chris Bielow <[email protected]>
Merge pull request #4797 from jpfeuffer/fix/graphResolutionVectorReuseBug

[FIX] bug introduced when trying to reuse vector

a42eaf9210643b5e09bfd2855d6384c1ef1c38d3 authored over 4 years ago by Timo Sachsenberg <[email protected]>
move TOPPView dialog settings<>param mapping into dialog class

dce2dc3639765bc35eaef0f59f5637eadbeb7028 authored over 4 years ago by Chris Bielow <[email protected]>
fix codefactor warnings

6950265114a14d4eab61f18bf0ea05055f1903b9 authored over 4 years ago by Chris Bielow <[email protected]>
[FIX] bug introduced when trying to reuse vector

Was not cleared correctly and sometimes led to type mismatch during get.

5782e19743afaaf7cd4423ba84c93742ac3b68c6 authored over 4 years ago by Julianus Pfeuffer <[email protected]>
start cleaning up the manual invocation of functions. Use signal/slot instead.

e29e93567398e777fa3995e795bc8e456e8e1afe authored over 4 years ago by Chris Bielow <[email protected]>
refactor copy'n'pasted legacy code

81302008665d25ca8d55df5f59c91b48f937d8a2 authored over 4 years ago by Chris Bielow <[email protected]>
make helper functions more generic

0a130b96117a28d67bc1d15b27c97e74d96858ef authored over 4 years ago by Chris Bielow <[email protected]>
code refactoring

2df673f6d0c79128455d820bbe77b3fa41a99f5f authored over 4 years ago by Chris Bielow <[email protected]>
Merge pull request #4796 from oliveralka/fix/MSstatsConverter_TMT

FIX: MSstatsTMTline_ bool operator

9790c3a3a1cf82fde380336c1726d2e43d626ae2 authored over 4 years ago by Timo Sachsenberg <[email protected]>
FIX: MSstatsTMTline_ bool operator

66cba31cf6e072f1fe4c6f8d589cbdacea36b864 authored over 4 years ago by oliveralka <[email protected]>
fix typo

8f634f42b2880888dfdf49a6c3d287ddcd622ac0 authored over 4 years ago by Chris Bielow <[email protected]>
[FEATURE] refactor Filter widget (first step: move code to new class;) missing: use proper signals instead of passing TOPPViewBase pointers internally

8ef6f0fcad687eb7ba729a3730312afabcd620b0 authored over 4 years ago by Chris Bielow <[email protected]>
minor changes

767944c4d0b03add770fb852fdd149d6e3849cea authored over 4 years ago by Tom Waschischeck <[email protected]>
target+decoy handeled

f5460f4b84d1e9ee46f70226bfd55a74651b5eb5 authored over 4 years ago by Tom Waschischeck <[email protected]>
include cfloat instead of limits

291fe98fdce7a0be14dcb1e1a3d4bb08200745c0 authored over 4 years ago by Tom Waschischeck <[email protected]>
minor

79f29551daffd8d933c6d567e211759f6df3ac99 authored over 4 years ago by Chris Bielow <[email protected]>
removed empty lines

2b4184f4fed8b90163b2974282523ddd9c6bc101 authored over 4 years ago by Tom Waschischeck <[email protected]>
PR changes

5558f42d4813167f229f8b9515a6c0ab5efc71a2 authored over 4 years ago by Tom Waschischeck <[email protected]>
remove more code

dc4e761881605d2325c876ed4a34d71e27cba962 authored over 4 years ago by Chris Bielow <[email protected]>
move code where it belongs..

1a3ef55bdbce43c8ea9ed81f537e716dc004d529 authored over 4 years ago by Chris Bielow <[email protected]>
some initial cleanup -- much more to come...

b329fe6906471a1e6aadef71e8cd918ed537489f authored over 4 years ago by Chris Bielow <[email protected]>
console info output

f71b268fc9ff56f9ee2ed81334e28e3780bc6e93 authored over 4 years ago by Tom Waschischeck <[email protected]>
Merge pull request #4790 from cbielow/swath_wizard

Swath wizard

9cf3a98225c95ab39009d8af0f03aee5cbda1923 authored over 4 years ago by Timo Sachsenberg <[email protected]>
Update SwathTabWidget.cpp

223d0ba92d4d0d48a22028e01f6a22f2074a3aa8 authored over 4 years ago by Timo Sachsenberg <[email protected]>
tsv output

98a65a77ca4940e79eee8247aa7ef1ec359e9012 authored over 4 years ago by Tom Waschischeck <[email protected]>
add colors to log

1b92a20cd809d28bd7a8debf799e27fa1d74dca9 authored over 4 years ago by Chris Bielow <[email protected]>
allow resize to small dimensions

4b760ccf55b1cf8fbb7442d349ec1ea68d62ca8c authored over 4 years ago by Chris Bielow <[email protected]>
layout

152bfc7de0c38f0edeeae15f39060606d8185f62 authored over 4 years ago by Chris Bielow <[email protected]>
add two options for TRIC parameters

72915bf7e82bcc8b6ff0ba9056a00aa3aef6a4cd authored over 4 years ago by Chris Bielow <[email protected]>
spectral quality

53dcb0773fb3c62efd6533cebae35c980133878b authored over 4 years ago by Tom Waschischeck <[email protected]>
suitability score working

21c80814081ba83db978387dd373ecf9e1117e28 authored over 4 years ago by Tom Waschischeck <[email protected]>
vs 2

ad922ac1575a0c815fd1212b3076dcb46b03ad50 authored over 4 years ago by KyowonJeong <[email protected]>
Acquisition added

edb3e3c9701d67e23133075d5d37bfcffef01d3a authored over 4 years ago by kyowonjeong <[email protected]>
First commit from vs

55fedbddc3a417909ee2c6cbe224155265326711 authored over 4 years ago by KyowonJeong <[email protected]>
Merge branch 'develop' into feature/DBSuitabilityTool

IDFileConverter exports one fasta entry

dbe2e71784fc595c8363aa4dfba3d4c2199869f0 authored over 4 years ago by Tom Waschischeck <[email protected]>
commit before develop merge

322b5e1f37414f920b570eadd27bcc1886ee4f1a authored over 4 years ago by Tom Waschischeck <[email protected]>
Acquisition added

b159ba71ea4594a9d65afefbeadd4c57e3ad6570 authored over 4 years ago by kyowonjeong <[email protected]>
Merge pull request #4789 from jpfeuffer/fix/xtandemProtParse

[FIX] XTandem out protein parsing

0710bf1cac7a38f9bc10b727000b53095cf640ee authored over 4 years ago by jpfeuffer <[email protected]>
forgot overwrite

abeea0f970fc43d537ce379c9d0186a6db9832ce authored over 4 years ago by Julianus Pfeuffer <[email protected]>
add test

41878ff170d703e486f05143c3a2462e596522b8 authored over 4 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #4788 from cbielow/swath_wizard

[FEATURE] SwathWizard: show summary statistics about a TargetedExperiment

530934a04091e0fe1a8b8abef315d566524db4cd authored over 4 years ago by Chris Bielow <[email protected]>
[FIX] Always update "current_protein" var to store the refs correctly in the PepEvidence

129c2e380cb0b33ec01f71ff2a447d2b2c99f72d authored over 4 years ago by Julianus Pfeuffer <[email protected]>
fix compile errors

d8f870448617f9a628b6a38472c65f68934db7cd authored over 4 years ago by Chris Bielow <[email protected]>
Merge pull request #4781 from Waschi97/feature/ConcatPepsInIDFileConverter

[Feature] Concatenate option for IDFileConverter

061e6955bf4ffd4a5705b887709d79b664922b78 authored over 4 years ago by jpfeuffer <[email protected]>
spelling

69bb6ae094540e4c50b8d5190ef99436433c4d4b authored over 4 years ago by jpfeuffer <[email protected]>
Merge branch 'develop' of https://github.com/OpenMS/OpenMS into swath_wizard

# Conflicts:
# src/openms_gui/source/VISUAL/DIALOGS/SwathTabWidget.ui

59eba6d569270d6037c446a79aa3e2b3785b67ca authored over 4 years ago by Chris Bielow <[email protected]>
[FEATURE] show summary statistics about a TargetedExperiment

6b11c7276e940fd10de5a8b37855778a4d48ee9c authored over 4 years ago by Chris Bielow <[email protected]>
changed test files accordingly

15e396177490e3b9d86e8d432d6db3b9da89b20c authored over 4 years ago by Tom Waschischeck <[email protected]>