github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

Completed class test

b3ca48296b584a31f1bf91bdbcbe01d9742a687a authored over 3 years ago by valentin-noske <[email protected]>

test

fc5551d6460d6a0bfdb025d5ac12bd59efb97014 authored over 3 years ago by Vincent Musch <[email protected]>

Merge branch 'develop' of https://github.com/OpenMS/OpenMS into GUI-fixes

1193159a3380ff6f1a8dfe512d9e5542315b3604 authored over 3 years ago by bielow <[email protected]>

renaming members

769c9c110ebf3138da3b6075dbe5d1dc20c75e16 authored over 3 years ago by bielow <[email protected]>

convenience method

34a1d63c2d626a427a5bb931f1aa5eea9cd20919 authored over 3 years ago by bielow <[email protected]>

Precursor cleanup

740904351baa2b6e062571214919698b037e487c authored over 3 years ago by bielow <[email protected]>

error handling

95c01e411533836cf9a619970b8ff88afa779d83 authored over 3 years ago by Vincent Musch <[email protected]>

Merge pull request #5312 from OpenMS/hroest-patch-1

Fix Discord widget

38716bcd1b900edae1848bc0da3b772eb89400be authored over 3 years ago by Hannes Roest <[email protected]>

Update README.md

27d70836fe60404b767f0f230cca8dc1846ffdb5 authored over 3 years ago by Hannes Roest <[email protected]>

Fasta Reader (#5308)

* added myself as author

* FASTA-Reader-Files without using Seqan...

a10988a18c86a218c2c7cc24f84c0d5af1ea70b9 authored over 3 years ago by noraw61 <[email protected]>

id & potential contaminant fix

7355b3fddd50dd2dae92efbee4b0dcee79557044 authored over 3 years ago by Vincent Musch <[email protected]>

Changed id

41a0f1ffcb96ac5b78bb4eedbfd57000331026d7 authored over 3 years ago by valentin-noske <[email protected]>

Deleted using namespace std and refactored includes

d9dfa4ed90b1d948041d4b342585cd9f6a0bdae6 authored over 3 years ago by valentin-noske <[email protected]>

test

8fd274ab93d8e497a4f5d04b158188d9f03e5ce5 authored over 3 years ago by Vincent Musch <[email protected]>

fehler behoben; fTc eingebunden; raw_file aktualisiert

352a6d31952c4ffcd327c3e067160d8b487ffa9a authored over 3 years ago by Vincent Musch <[email protected]>

Overlap removing bug fixed (last mass ignored before) + topFD output per charge in peakgroup

5239f521181ffbd21a946ba5c59b52558bf44c97 authored over 3 years ago by kyowonjeong <[email protected]>

Overlap removing bug fixed (last mass ignored before) + topFD output per charge in peakgroup

5b89eafeb9576a820736a447ce5f4811ad345827 authored over 3 years ago by kyowonjeong <[email protected]>

Added type column

435c17947a2d01e4cf0f19c390819a336731f999 authored over 3 years ago by valentin-noske <[email protected]>

Overlap removing bug fixed (last mass ignored before) + topFD output per charge in peakgroup

aa845e1f0dd6ea2ac25cd4fd7051c0ab89a09eab authored over 3 years ago by kyowonjeong <[email protected]>

minor

5d5b6a285a800759cdcf7eb59c8aae9a159552dd authored over 3 years ago by bielow <[email protected]>

remove example from doxygen

90412f0c52b37beef43da8886f1eef0578d48a86 authored over 3 years ago by Timo Sachsenberg <[email protected]>

funktioniert noch nicht Toppas crasht

d85d1ec109439d3331d3250142b0be48b9ecea5f authored over 3 years ago by Vincent Musch <[email protected]>

style changes

c9893a975afaf2e4ed6d65887f0fb865776a9fe4 authored over 3 years ago by Nora Wild <[email protected]>

[PY-Bindings] add some doc to MSExperiment and MzMLFile (#5225)

* add some doc to MSExperiment and MzMLFile

* Update MSExperiment.pxd

* Update MSExperimen...

8570f04ec5346542be2fda76cf83563460e614f7 authored over 3 years ago by Timo Sachsenberg <[email protected]>

Derive from runtime_error for pyOpenMS error messages (#5220)

* attempt to derive from runtime_error for pyOpenMS error messages

* Update Exception.h

* ...

fccd664659d5ef58fc7159339387dc13ff5e1e11 authored over 3 years ago by Timo Sachsenberg <[email protected]>

Merge branch 'develop' of https://github.com/OpenMS/OpenMS into GUI-fixes

# Conflicts:
# src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp
# src/openms_gui/sourc...

a118bd65d3a662816b19a4a12d4193194e7a942a authored over 3 years ago by bielow <[email protected]>

save

a1778074b3aa8131c98a358f0b042b5221105415 authored over 3 years ago by bielow <[email protected]>

style changes

82e3769b7d01dc9e04fcd4e58affffd94d9c1a9d authored over 3 years ago by Nora Wild <[email protected]>

exceptions

09ef524dfd27f191439df42dc654ec05f6921795 authored over 3 years ago by Vincent Musch <[email protected]>

cleanup

95732b6a31a7e27917cba451dfdee31cacd4750c authored over 3 years ago by bielow <[email protected]>

Overlap removing bug fixed (last mass ignored before) + topFD output per charge in peakgroup

0cc8b701667e72f592c9705a49891e175d4d5bac authored over 3 years ago by kyowonjeong <[email protected]>

match time diff & QC

d2a3c6d4e9e349636646d794e38535ddbac171f4 authored over 3 years ago by Vincent Musch <[email protected]>

fasta-reader

fcc4d045faba32ba6a3408820ffac59f86fb6b04 authored over 3 years ago by Nora Wild <[email protected]>

fasta-reader

ad3292252da25dd81087c78145ecd9e29e016f33 authored over 3 years ago by Nora Wild <[email protected]>

fasta-reader

fa81f81e9fc16b801e07aa1c72f76a45f2bf3aac authored over 3 years ago by Nora Wild <[email protected]>

Merge branch 'testbranch' of https://github.com/kasrat93/OpenMS into fasta-reader

a62c4f6d137cbef441cd39c71e1fffbcd9647d94 authored over 3 years ago by Nora Wild <[email protected]>

old-test-version

25e85704c2a6d6e1ac977da06174130be8829079 authored over 3 years ago by Nora Wild <[email protected]>

testPos()

7360aa58c7d3182d0038ef2f0cb9cb291584a116 authored over 3 years ago by kasrat93 <[email protected]>

Merge branch 'fasta-reader' of https://github.com/noraw61/OpenMS into testbranch

a7b2cf29619829bc7fe06ae51fb1d9607c0584e6 authored over 3 years ago by kasrat93 <[email protected]>

merge-conflict

52062e997ee846f16206b5bb3ec4181963c68f4d authored over 3 years ago by kasrat93 <[email protected]>

fasta-reader

c59d49198fa3bc6b9a2629d69809cf3f779169ed authored over 3 years ago by Nora Wild <[email protected]>

folder

92da9b3084a74861a797bde7b560e962eae32f5a authored over 3 years ago by Vincent Musch <[email protected]>

error fixing

598c208d790c043d3791912df08c4f3b596b8b38 authored over 3 years ago by Vincent Musch <[email protected]>

Merge

b3cea629c92076f7cbec8d60c2fde7070a08794d authored over 3 years ago by valentin-noske <[email protected]>

convenience functions

1511bb592fbbc7a41520869a43cb0585b50126f8 authored over 3 years ago by bielow <[email protected]>

just playing around..

1dde2ad5bb119d64e7735f72bb422db811d1b5d3 authored over 3 years ago by bielow <[email protected]>

Small changes

04d4fb0bf1dd92f998b498512d980b68e6b447f3 authored over 3 years ago by valentin-noske <[email protected]>

Fixes OpenMS/OpenMS#5232 (#5303)

f2904bc371dc72e7f7a27a6d48fc6bc55c0254f7 authored over 3 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #2 from OpenMS/develop

Update my fork

e9a8010e6e4d8f1c5635309212772c3f912db4f4 authored over 3 years ago by emilpaulitz <[email protected]>

delete_tmp

5eb9ab5aa03b7e81f98f4d2bf87d88849a20de3e authored over 3 years ago by kasrat93 <[email protected]>

test position

662920eea454027b96a7b93f830511efd3875ea6 authored over 3 years ago by kasrat93 <[email protected]>

pointer

4c3a40ad84e1837d660890f5f3e3c5057d446b22 authored over 3 years ago by Vincent Musch <[email protected]>

Update FAIMSHelper_test.cpp

5fe7aec09ea7983db205ec64345b24d2004d6628 authored over 3 years ago by Timo Sachsenberg <[email protected]>

Feature/split by faims cv (#5302)

* [FEATURE] get compensation voltages from FAIMS experiment

* [TEST] class test for FAIMSHelp...

c80f2653ade781851f5a7ee52ea657de6ffd6b38 authored over 3 years ago by Chris Bielow <[email protected]>

fix warning

46882359bde6445ec1d5b5a14ae978061b2a1cc8 authored over 3 years ago by timosachsenberg <[email protected]>

dies und das

acb608d143398d31fe77c554f6d199a26a4fc378 authored over 3 years ago by Vincent Musch <[email protected]>

eof

b545d8833f635c9dc155a8b4a8d066fcfb0d077a authored over 3 years ago by Nora Wild <[email protected]>

\r

a633f58f9210d5ba4d369b79132ba7d5dd566174 authored over 3 years ago by Nora Wild <[email protected]>

ProgressLogger

40626c037c8663b991f9b06715ad791cd554158d authored over 3 years ago by Nora Wild <[email protected]>

[FEATURE] filter unmodified sequences by regex in id (#5301)

Co-authored-by: timosachsenberg <[email protected]>

646133936f290b9fdb08d7832f102dd1b2231988 authored over 3 years ago by Timo Sachsenberg <[email protected]>

Horrible if_clause

9a05145e4f32136a9e1071c95a576a4257a9e5cd authored over 3 years ago by valentin-noske <[email protected]>

Merge branch 'develop' of https://github.com/OpenMS/OpenMS into fasta-reader

83d84294e5d36b197ad4e38739a5aba2b72cad11 authored over 3 years ago by Nora Wild <[email protected]>

merge-conflict

dcfc2705ecefd18dee5638aef50d58204e64f530 authored over 3 years ago by kasrat93 <[email protected]>

restructure menu

314cea1b2e4b91194e870bccbf386075e9b607ed authored over 3 years ago by bielow <[email protected]>

atEnd()

2288487e17725d3bea27274eb35cc7dd97be69b5 authored over 3 years ago by Nora Wild <[email protected]>

Fasta Reader

127e66030118e257c2059ca5e3c2c4110b4d0f9b authored over 3 years ago by Nora Wild <[email protected]>

some simplifications

642c826a6d3260fa03711dfc1e908fc47198e103 authored over 3 years ago by bielow <[email protected]>

include order

cf3f4b20a83da6ba475669b6cf2df1d470359c25 authored over 3 years ago by bielow <[email protected]>

added convenience method

575b8c6a75db2a3df1773a8f5d9d90d1de8fdd8b authored over 3 years ago by bielow <[email protected]>

rtalign

6f809f9ca1ede991a755ae3ee11fe4d5a6624a29 authored over 3 years ago by Vincent Musch <[email protected]>

[Feature] Adding TOPP tool/util params to .TOPPView.ini (#5256)

* Initial commit

* [perf, bug] Fixed issue with thread-safety, now ussing unordered_map inste...

fcb85b93d17c2f93c7aa26caf4cb5871c27ea8a1 authored over 3 years ago by David Voigt <[email protected]>

Merge remote-tracking branch 'origin/feature/FLASHDeconv' into feature/FLASHDeconv

6fb70b17b8fa35a97bc74f635f27ae986c0460ea authored over 3 years ago by kyowonjeong <[email protected]>

FLASHDeconv 2.0 beta+

7aa379770000d38c468ab00e74e5dc534e6b49c8 authored over 3 years ago by kyowonjeong <[email protected]>

merged

72647480a64c982aed18a597595eb7b69bb764e1 authored over 3 years ago by valentin-noske <[email protected]>

Added new variables to mqevidencetxt

b0f5d9b75b66f53a752ed982bad37d8203421b52 authored over 3 years ago by valentin-noske <[email protected]>

qc

b37ff84c3615f7bc8d79f9b46ba2f4d8d90b317f authored over 3 years ago by Vincent Musch <[email protected]>

test.tmp

bcf9b788cee02ff5a695c967219717124c3c123c authored over 3 years ago by kasrat93 <[email protected]>

Merge pull request #5300 from timosachsenberg/feature/pyTOPPCTD

[pyTOPP] initial support for CTD

b74a66ea57d38c000b65646b03e7be2e94f3abf2 authored over 3 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #5299 from timosachsenberg/pyopenms/string_conversion

added string conversion to param and other classes

832572cd0a6d60545c5157c4fe71a1d07cc45dcd authored over 3 years ago by Timo Sachsenberg <[email protected]>

[pyTOPP] initial support for CTD

1e58fa8b1791c90f2e69c6b670183c14f9269319 authored over 3 years ago by timosachsenberg <[email protected]>

test setPosition()

c9d1d50e66d89e76690c1ba755e2c14014737eb8 authored over 3 years ago by kasrat93 <[email protected]>

atEnd()

26859707f227db14eedaa991de34aff980b2f8fb authored over 3 years ago by Nora Wild <[email protected]>

merge and Fasta Reader

ab28d8d5ce2bbd7031c0c6f012b9dca0cf689518 authored over 3 years ago by Nora Wild <[email protected]>

remove unneeded func

93fb1bce70b046633cddfcac7521dcfe0130754a authored over 3 years ago by bielow <[email protected]>

some minor C17 improvements

4fe5f804d99d3a442251da35ca1be198b28f4f81 authored over 3 years ago by bielow <[email protected]>

initial support for CTD files in pyTOPP

aedfe48d271ecd8b8a86253761578c9af903f73c authored over 3 years ago by timosachsenberg <[email protected]>

Merge branch 'nightly' into feature/FLASHDeconv

84068abff9bc7ef223dfe786493bc8cde179c6af authored over 3 years ago by JeeK <[email protected]>

ppm zu dalton

277bea6f7578e5ac2cc02bc9cfcdba18fce59f2f authored over 3 years ago by Vincent Musch <[email protected]>

Merge pull request #5284 from OpenMS/feature/remove_inspect

remove inspect adapter

aafca28e9beddaf3d6307772eb0ba9c2d4c36e7b authored over 3 years ago by Timo Sachsenberg <[email protected]>

added string conversion to param and other classes

63a7460be3dca9c6f355a89beab0c918a7818210 authored over 3 years ago by timosachsenberg <[email protected]>

Added some new variables and fixed some errors

31d494603b86be87e58e2368d2e46ef7e06d3d04 authored over 3 years ago by valentin-noske <[email protected]>

Merge pull request #5282 from OpenMS/feature/mzqc_export

Feature/mzqc export

ba6079dd99fa72a46c1bf0e42226f3b1f663811c authored over 3 years ago by Timo Sachsenberg <[email protected]>

Add tool description for novor

74fa6ab8dd40af73e4f3438b159952ccd171694d authored over 3 years ago by Julianus Pfeuffer <[email protected]>

topptools eingebunden

8781a1393eebf4e5abc8aab067b0f917bff136f4 authored over 3 years ago by Vincent Musch <[email protected]>

Solve git problems

8ded51a249e6406ca7c2ac7b7648e2e45d09340d authored over 3 years ago by valentin-noske <[email protected]>

some C17 conversions (#5285)

* some C17 conversions

* more raw literals

* Update Constants.h

https://www.fluentcpp.c...

9465cf72b81fbbec55a9fa6ae84887a7b8ce3425 authored over 3 years ago by Timo Sachsenberg <[email protected]>

New variables added

9e629af30d68e1a2037e11e7551cc43727a62137 authored over 3 years ago by valentin-noske <[email protected]>

Merge remote-tracking branches 'origin/feature/mzqc_export' and 'origin/develop' into feature/mzqc_export

f0850841616d00c1b3e2a101a816ee76ccdf6cd2 authored over 3 years ago by axelwalter <[email protected]>

fix error LNK2019

7c1d2549dd2a3ea12d1a0f2ee1f86f9b7821a8ca authored over 3 years ago by axelwalter <[email protected]>

GUI fixes (#5297)

* fix confusing annotation (not used)

* fix member name

* use auto

* some simplicificat...

06cd72aea4fb771dacf26223d6172902ab3dfa5e authored over 3 years ago by Chris Bielow <[email protected]>