github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

finished optional attributes for MzXML files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@985 6adb6e08-d915-0410-9...

49a3c41e27d9d33b768e63202a9935d1a7483e58 authored almost 18 years ago by Thomas Kadauke <[email protected]>

improved includes to speed up the compile time

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@984 6adb6e08-d915-0410-94...

51ed184cb3766ff7314fda5015bf3880c7fba19f authored almost 18 years ago by Marc Sturm <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@983 6adb6e08-d915-0410-941f-83917bcadc18

f874eb9cf0049bb01718fb5dae748c50cfcda31a authored almost 18 years ago by Marc Sturm <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@982 6adb6e08-d915-0410-941f-83917bcadc18

6b994d6276a4859abb17b0e885c301e78c92f852 authored almost 18 years ago by Marc Sturm <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@981 6adb6e08-d915-0410-941f-83917bcadc18

622c9c74953cd2ae00dda2efc96b3779c1b8a2b9 authored almost 18 years ago by Marc Sturm <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@980 6adb6e08-d915-0410-941f-83917bcadc18

e196debd325b0c47cddb7ba6b70501cc303f814c authored almost 18 years ago by Eva Lange <[email protected]>

fixed problem with implicit conversion

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@979 6adb6e08-d915-0410-94...

b35750f038c9f100bfaca1a519fd5a97c6de5632 authored almost 18 years ago by Marc Sturm <[email protected]>

fixed momory leak

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@978 6adb6e08-d915-0410-94...

e9587c60b2d97be9f1433dc88ba566fd822caa65 authored almost 18 years ago by Marc Sturm <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@977 6adb6e08-d915-0410-941f-83917bcadc18

f71261ab4e3722de5e2467856184437b17493c9f authored almost 18 years ago by Eva Lange <[email protected]>

fixed use of namespaces; corrected header guards

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@976 6adb6e08-d915-0410-94...

c2fead32837383bbf3a2bbf73abed1db23c7eae6 authored almost 18 years ago by Marc Sturm <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@975 6adb6e08-d915-0410-941f-83917bcadc18

3fa0f5bd0f306e0e86d1ec0f08ef45fe2e553b77 authored almost 18 years ago by Eva Lange <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@974 6adb6e08-d915-0410-941f-83917bcadc18

737279837779717f7ea5765141f60c3315b20811 authored almost 18 years ago by Eva Lange <[email protected]>

implemented metadata-only loading for MzXML and MzData-files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@973 6adb6e08-d915-0410-9...

effddea92aefd207c58b3188f260890076d04511 authored almost 18 years ago by Thomas Kadauke <[email protected]>

added two more sum operators to String (for std::string and String)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@972 6adb6e08-d915-0410-94...

85bfdd8b38bda7bfad6862a2be367b2d6b3138bf authored almost 18 years ago by Marc Sturm <[email protected]>

Corrected the calculation of the number of data points given the size of the structuring element (in Th).

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@971 6adb6e08-d915-0410-94...

d218468a2e8072ab040316419cfdda692f536703 authored almost 18 years ago by Eva Lange <[email protected]>

added a todo concerning size of structuring element

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@970 6adb6e08-d915-0410-94...

cab019bb381f2ee5183f138446b31264b211a1c4 authored almost 18 years ago by Clemens Gröpl <[email protected]>

changes in TOPP documenation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@969 6adb6e08-d915-0410-94...

def7ec6ffed026395c5820f8d7c257ca3d411bc9 authored almost 18 years ago by Marc Sturm <[email protected]>

changes to TOPP docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@968 6adb6e08-d915-0410-94...

785d5090dd7b8006b05f566a2c109e0c013324f9 authored almost 18 years ago by Marc Sturm <[email protected]>

New standard output for FeaFi

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@967 6adb6e08-d915-0410-9...

34bcced19b0eb60aa5d2cbaf25c9cde6a5c45e78 authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

reimplemented TheoreticalSpectraGenerator with a param interface

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@966 6adb6e08-d915-0410-94...

9f3d0bfe8075e031f6d94df34de15f7970cd1430 authored almost 18 years ago by Andreas Bertsch <[email protected]>

docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@965 6adb6e08-d915-0410-94...

242b14953c00615c7f338863681d02506f7de8e0 authored almost 18 years ago by Andreas Bertsch <[email protected]>

Updates for Correlation modules (contain p-values now)

and ModelFitting.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@964 6a...

dc03cd0f3b3454deb80da19ac8ab9e839da7c26b authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@963 6adb6e08-d915-0410-941f-83917bcadc18

885d3dd96ad4fd5e00ddd71efd99d1d7799f6804 authored almost 18 years ago by Eva Lange <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@962 6adb6e08-d915-0410-941f-83917bcadc18

bb30263763b8d6018cc7055dd65783cde4058b60 authored almost 18 years ago by Eva Lange <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@961 6adb6e08-d915-0410-941f-83917bcadc18

9d0d4aa4b52d07a09ce16b24ffaad10e351a3237 authored almost 18 years ago by Eva Lange <[email protected]>

added PILISIdentification TOPP-tool; does not work properly

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@960 6adb6e08-d915-0410-94...

17edd10fe32bd007ba34db02a4a778f5ab165603 authored almost 18 years ago by Andreas Bertsch <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@959 6adb6e08-d915-0410-941f-83917bcadc18

e97c1ed3e7aba706ff06cbd3e0b6490d336daa29 authored almost 18 years ago by Eva Lange <[email protected]>

added IdentificationData and adapted all classes/methods

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@958 6adb6e08-d915-0410-94...

ced12031f4b98570ffbb19f7d3f32ed9a912c6b9 authored almost 18 years ago by Marc Sturm <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@957 6adb6e08-d915-0410-941f-83917bcadc18

16b8b1fdb5a3c151dce312a5310e64131c4dc0f0 authored almost 18 years ago by Eva Lange <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@956 6adb6e08-d915-0410-941f-83917bcadc18

656ccc210e0bf13b09660aa9b8aa2e5b1fd51c30 authored almost 18 years ago by Eva Lange <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@955 6adb6e08-d915-0410-941f-83917bcadc18

e23417b4dac295350e2e56e360474fe81934a4ef authored almost 18 years ago by Eva Lange <[email protected]>

Add BasePairFinder and BaseSuperimposer test.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@954 6adb6e08-d915-0410-94...

d24a1a9ceaf94de781eb4a1fd6542cc9b3bb1506 authored almost 18 years ago by Eva Lange <[email protected]>

Rename geometric hashing classes as pose clustering classes.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@953 6adb6e08-d915-0410-94...

e64ccbb1540fd09f240f50f2219a9b8280783cc2 authored almost 18 years ago by Eva Lange <[email protected]>

Updates for IsotopeWaveletSeeding, removed old FeaFi modules.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@952 6adb6e08-d915-0410-9...

9d4c6c7f626dea88b098fe19d19246d1ce1c025a authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

added PILIS identification engine. Very experimental atm; do not report bugs ;)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@951 6adb6e08-d915-0410-9...

0f7215b1a8f335bbb419c1cc190866c04bb2f658 authored almost 18 years ago by Andreas Bertsch <[email protected]>

New Seeder based on Isotopic wavelet

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@950 6adb6e08-d915-0410-9...

a623c4257b49bc3e0e0b4854c6f8c0b77da232b7 authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

reimplemented WindowMower, fixed some related bugs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@949 6adb6e08-d915-0410-94...

0a96439367ebde276040c87d9caec9aad8dcf1a8 authored almost 18 years ago by Andreas Bertsch <[email protected]>

reimplemented WindowMower, fixed some related bugs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@948 6adb6e08-d915-0410-94...

1276f78228ce2fc1c4df293774f1af5e7998966c authored almost 18 years ago by Andreas Bertsch <[email protected]>

added gift wrapping impelmentation for convex hull => FeatureFinder is available without CGAL

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@947 6adb6e08-d915-0410-94...

fb2e85cfc9aa44bcf1499b663bf707d6c8f21486 authored almost 18 years ago by Marc Sturm <[email protected]>

added Makefile for doc

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@946 6adb6e08-d915-0410-94...

91e06e9b979f745ee75079c6e5e741105eedd04f authored almost 18 years ago by Marc Sturm <[email protected]>

worked on Resampler, Doc fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@945 6adb6e08-d915-0410-94...

9b71833290c782012073bd05e2575743bd252863 authored almost 18 years ago by Clemens Gröpl <[email protected]>

second working version of IDFeatureMapper with test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@944 6adb6e08-d915-0410-94...

b3513669cacc4f883e2f5c7ef015bdba4cbff537 authored almost 18 years ago by Marc Sturm <[email protected]>

runtime improvements in DConvexHull; first working implementation of IDFeatureMapper; minor changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@943 6adb6e08-d915-0410-94...

f72c010b5eafb534eeb39b6c9f853c5a6bc0b6cf authored almost 18 years ago by Marc Sturm <[email protected]>

finished DConvexHull

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@942 6adb6e08-d915-0410-94...

2ba28a8e25f110fa6b7fc738d2ee04e1df4f4a07 authored almost 18 years ago by Marc Sturm <[email protected]>

reimplemented some PreprocessingFilters; added docu & tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@941 6adb6e08-d915-0410-94...

e8618cd9ea2e6119d8a1bf57bd8103c704c027bc authored almost 18 years ago by Andreas Bertsch <[email protected]>

fixed mysterious bug in featurefinder; something seems to be wrong in String:operator+(const char*)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@940 6adb6e08-d915-0410-94...

bdfd360c064269b7078cb0790c6a32157ff3bdff authored almost 18 years ago by Marc Sturm <[email protected]>

fixed a bug in mzXML file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@939 6adb6e08-d915-0410-94...

3bbe15386ce5a2e0ef292a8b29fab999beb7636c authored almost 18 years ago by Marc Sturm <[email protected]>

added missing includes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@938 6adb6e08-d915-0410-94...

039181e846b3d3bdeb7494f9f0fee8f6810e1347 authored almost 18 years ago by Marc Sturm <[email protected]>

refactored xml file classes to use a common base class

(SchemaFile)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@937 6adb6e0...

b5e4deed48b3974929261a8b7e857a60c812bfda authored almost 18 years ago by Thomas Kadauke <[email protected]>

added ConvexHull class; replaced vector by DconvexHull in DFeature

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@936 6adb6e08-d915-0410-94...

753094d8597b07597605f494fb442cea1e659dfd authored almost 18 years ago by Marc Sturm <[email protected]>

made tests more robust about semantically equivalent changes when storing files, as discussed with marc

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@935 6adb6e08-d915-0410-9...

559e71dc5f3eb8568ef1a8a7aa14895a3ee7d77e authored almost 18 years ago by Thomas Kadauke <[email protected]>

InspectOutfile: throwing exceptions with mzXML/mzData, to get the real error message, InspectInfile: using MassFilter instead of two masses, InspectAdapter: adaptions to new inspect version

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@934 6adb6e08-d915-0410-94...

682bc9a9622bac99c9d57b8f2d3133089b6005a4 authored almost 18 years ago by Martin Langwisch <[email protected]>

changed interface of AnalysisXMLFile

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@933 6adb6e08-d915-0410-94...

b7fd67d14e2ab05ceb4da1effab4fb74b5a9b585 authored almost 18 years ago by Marc Sturm <[email protected]>

fixed some ClusterFactory related warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@932 6adb6e08-d915-0410-94...

5666ca5cdb9261683e0053f5f3997ecc2682e9db authored almost 18 years ago by Andreas Bertsch <[email protected]>

renamed MSExperimentAnnotator to IDSpectrumMapper; added IDFeatureMapper

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@931 6adb6e08-d915-0410-94...

6c07c14430c497753b8c1a6eaa421a7fe74f586a authored almost 18 years ago by Marc Sturm <[email protected]>

renamed PeptideSequence to AASequence; moved ROCCurve to OpenMS::Math namespace

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@930 6adb6e08-d915-0410-94...

382d8a1e984edb6ed2fc270e890dd252a3ab4873 authored almost 18 years ago by Marc Sturm <[email protected]>

reimplemented some TRANSFORMERS; renamed some test data files; docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@929 6adb6e08-d915-0410-94...

d3e1c6e75c759128e551d56be8def3f98dfac874 authored almost 18 years ago by Marc Sturm <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@928 6adb6e08-d915-0410-941f-83917bcadc18

15fe7e75ab3003b29ef70bbf6996c214b52ae3ff authored almost 18 years ago by Marc Sturm <[email protected]>

fixed typo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@927 6adb6e08-d915-0410-94...

3cc00e6b40973dcd72d9bd0e8278687b0bf30756 authored almost 18 years ago by Andreas Bertsch <[email protected]>

added missing test files for SpectraFilter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@926 6adb6e08-d915-0410-94...

2cf8350d9e923b376863bb02f2019522ee10f449 authored almost 18 years ago by Andreas Bertsch <[email protected]>

reactivated SpectraFilter; implemented PreprocessingFilters into Factory

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@925 6adb6e08-d915-0410-94...

82dac7ab67eb036b679ed2c73a65e0546c130ea9 authored almost 18 years ago by Andreas Bertsch <[email protected]>

fix for FeatureFinder test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@924 6adb6e08-d915-0410-94...

d09356b5bb27ea7946807a57442e2c1cc126a331 authored almost 18 years ago by Marc Sturm <[email protected]>

Small changes to FF output format.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@923 6adb6e08-d915-0410-9...

aa80e7c9d339cf00c52ff01a01569803174d98e6 authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

No debug output.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@922 6adb6e08-d915-0410-9...

5db04ad5e723a64537d55755a836731f822a06cd authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

New FF module PickedPeakSeeder, Removed several deprecated ones.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@921 6adb6e08-d915-0410-9...

3c5d47d4f83c4386a8071a4c174d409737671947 authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

MarrWaveletSeeder stops writing debug output.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@920 6adb6e08-d915-0410-9...

28f6cedbb513fcf8f002b2cf54a64b5914089747 authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

fixed CLUSTERING compile issue; SpectraFilter (still not full operational)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@919 6adb6e08-d915-0410-94...

b34fd87e60574ae3e9b9001ab7d351a885b0336a authored almost 18 years ago by Andreas Bertsch <[email protected]>

Removed Clustering classes from Makefile (don't compile).

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@918 6adb6e08-d915-0410-9...

7397cb99199c0eaa8050dbdfe54d79afbe06cd63 authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

ClusterFactory removal

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@917 6adb6e08-d915-0410-9...

3beae76c13c5510ea29c53d1d42d98898a1a22f5 authored almost 18 years ago by Andreas Bertsch <[email protected]>

deleted ClusterFactory

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@916 6adb6e08-d915-0410-9...

253654f12c5ae75acb381f8fc5768dab3b030ff5 authored almost 18 years ago by Andreas Bertsch <[email protected]>

ported ClusterSpectrum to Factory<>;

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@915 6adb6e08-d915-0410-9...

f100282d939f75530277d55af0f3290ec6d5ee45 authored almost 18 years ago by Andreas Bertsch <[email protected]>

Changed interface of AdditiveSeries; misc changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@914 6adb6e08-d915-0410-94...

b6927f50dc1e9fa43a250875014dfdce6af1129b authored almost 18 years ago by Marc Sturm <[email protected]>

removed deprecated CVS author tags

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@913 6adb6e08-d915-0410-94...

0653689cf9975f7770d7743db4076e243ab8dd33 authored almost 18 years ago by Marc Sturm <[email protected]>

dependencies fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@912 6adb6e08-d915-0410-94...

99e0b3e5fa6cd38484633382a0ac35d8d0f426d0 authored almost 18 years ago by Marc Sturm <[email protected]>

changed parameters of AdditiveSeries a bit

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@911 6adb6e08-d915-0410-94...

0a0960363cd24a74354ca6ee7c088e69f6de3e2e authored almost 18 years ago by Marc Sturm <[email protected]>

changes due to FeatureFinder using CGAL

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@910 6adb6e08-d915-0410-94...

1c6358ef32c4ce0a4af8c83fa370a7dc5a212d60 authored almost 18 years ago by Marc Sturm <[email protected]>

Makefile updated to new MascotAdapter interface

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@909 6adb6e08-d915-0410-94...

7a7a51e52ecf9bf005ffaeedb80c9c434255771d authored almost 18 years ago by NicoPfeifer <[email protected]>

added OpenMS DB graph and script to create the graph from the sql queries

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@908 6adb6e08-d915-0410-94...

ce81c62a88fa0728769e7e7ca700d2de41b24741 authored almost 18 years ago by Marc Sturm <[email protected]>

Small changes to MascotAdapter (no additional_in, better understandable output)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@907 6adb6e08-d915-0410-94...

33841ff602e4cd1d805bc95cce4038797224e229 authored almost 18 years ago by NicoPfeifer <[email protected]>

added checkDefaults method to Param; several fixes in Param; docu changes; minor other changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@906 6adb6e08-d915-0410-94...

ea5f1af91bd2aa54725ab368a54751c017abc12a authored almost 18 years ago by Marc Sturm <[email protected]>

docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@905 6adb6e08-d915-0410-94...

9411de729c4636429c10e64465204f280c699ed7 authored almost 18 years ago by Marc Sturm <[email protected]>

docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@904 6adb6e08-d915-0410-94...

2b2e747bbac48cf43eb0bdf59879b57602e514e4 authored almost 18 years ago by Marc Sturm <[email protected]>

fixes for TOPP tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@903 6adb6e08-d915-0410-94...

339acf9c921150822123e94a8ad6dcd41d68277e authored almost 18 years ago by Marc Sturm <[email protected]>

fixes in MascotAdapter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@902 6adb6e08-d915-0410-94...

d897127e65b2a659e9b56dc265b79b7e0b0ddd53 authored almost 18 years ago by Marc Sturm <[email protected]>

doc images

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@901 6adb6e08-d915-0410-94...

4a0f121e0db5202f76c9cc0bd76640d9e154f21d authored almost 18 years ago by Clemens Gröpl <[email protected]>

moved some TOPP applications to TOPPBase2

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@900 6adb6e08-d915-0410-94...

f59da61ebdb1b51589e2fa0256f6a4fbd6eba76b authored almost 18 years ago by Marc Sturm <[email protected]>

Bugfix for MarrWaveletSeeder

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@899 6adb6e08-d915-0410-9...

8b29095fbb89025cba0d3d5abc9bc5e5335c4dc1 authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

added IO tests to TOPPBase2

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@898 6adb6e08-d915-0410-94...

e0a95bc55de7315517746e9e15deaecc71475923 authored almost 18 years ago by Marc Sturm <[email protected]>

added handling of mandatory parameters to TOPPBase2

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@897 6adb6e08-d915-0410-94...

8ed710904ab2371bace9be1e196b920eea9bf326 authored almost 18 years ago by Marc Sturm <[email protected]>

Updates for FeaFi seeder.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@896 6adb6e08-d915-0410-9...

9b80e3e495d549064fb0f3bef90b3f8c0e566de2 authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

changes due to new String::operator+

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@895 6adb6e08-d915-0410-94...

1392e2b5bec4a4531744d056c78706cc3ce6c1ba authored almost 18 years ago by Marc Sturm <[email protected]>

added operator+ for numbers to String

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@894 6adb6e08-d915-0410-94...

dcc98a564d29b60e26c4d14f9eac84ed9ead7192 authored almost 18 years ago by Marc Sturm <[email protected]>

Larger changes in FileMerger; docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@893 6adb6e08-d915-0410-94...

5e427c8f05215853a79495f4202ddf36091278dc authored almost 18 years ago by Marc Sturm <[email protected]>

Updates for MarrWaveletSeeder and test for MSExperimentExtern is back for good !

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@891 6adb6e08-d915-0410-9...

f5f2085dfa7fa13da35d05bb0cdc0a22a0507abf authored almost 18 years ago by Ole Schulz-Trieglaff <[email protected]>

added System docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@890 6adb6e08-d915-0410-94...

f4db7b1c94812502e92930bef1a1f72b6e702480 authored almost 18 years ago by Marc Sturm <[email protected]>

removed in_type of TOPP resampler; docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@889 6adb6e08-d915-0410-94...

b6ab0727c1078c799416733fcddc7ff7109da6a2 authored almost 18 years ago by Marc Sturm <[email protected]>

proerties change

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@888 6adb6e08-d915-0410-94...

7811fef180d2892db1215969ae08dbbf317d8373 authored almost 18 years ago by Marc Sturm <[email protected]>

changes due to addition of 'File' class; cleanup in TOPP tools; docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@887 6adb6e08-d915-0410-94...

4f058963dae4713201011697d2c6d90f9f479c63 authored almost 18 years ago by Marc Sturm <[email protected]>

added some methods and tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@886 6adb6e08-d915-0410-94...

171baedcc106dec040d273d126142a805ca3b95d authored almost 18 years ago by Marc Sturm <[email protected]>

added some methods and testsinclude/OpenMS/DATASTRUCTURES/String.h

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@885 6adb6e08-d915-0410-94...

e23db6060e17e2e9cd80eda513f6436a455895b1 authored almost 18 years ago by Marc Sturm <[email protected]>