github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

Added more info about contributing

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5342 6adb6e08-d915-0410-9...

fe60b1ecd1fac4b1202e5dbcaba5fd2e0e64cc52 authored over 15 years ago by Marc Sturm <[email protected]>

Moved Bruker fid stuff to the branch

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5340 6adb6e08-d915-0410-9...

0d45e40bab4c98eeb04acbab7cd3d330ddd15a6f authored over 15 years ago by Marc Sturm <[email protected]>

first modification

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5338 6adb6e08-d915-0410-9...

97af47236a2fc35fd18e23afd2ff2e888d3e22e8 authored over 15 years ago by Guillaume Belz <[email protected]>

Todo changes for David

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5335 6adb6e08-d915-0410-9...

0f81d635151e5e96bfb4bb98111dfc7f5adf15e1 authored over 15 years ago by Marc Sturm <[email protected]>

done DBAdapter TODOs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5333 6adb6e08-d915-0410-9...

e98f99f0fae5b0fbdf4341ef615fd4bce657a611 authored over 15 years ago by Mathias Walzer <[email protected]>

TOPPAS: dragging of tools instead of their types is not possible anymore; added file type checks

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5332 6adb6e08-d915-0410...

a9dadc042fd91eb852262cdabc88c60bceab03f6 authored over 15 years ago by Johannes Veit <[email protected]>

Added TOPPAS_elements module in doxygen; added some OPENMS_DLLAPIs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5331 6adb6e08-d915-0410...

5b1191a551ff06e17fdafa8fdb6990b24775470a authored over 15 years ago by Johannes Veit <[email protected]>

Some changes to compression for mzML

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5330 6adb6e08-d915-0410-9...

ac4fa99a81b19ac0e10ac3af70e298a924110535 authored over 15 years ago by Marc Sturm <[email protected]>

Rubber band is now working in all directions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5329 6adb6e08-d915-0410-9...

89f8ba375d6baba4f7cc8b553be261b651de1f9e authored over 15 years ago by marC_sturm <[email protected]>

Todo removed

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5328 6adb6e08-d915-0410-9...

2450c6798f4be2636a7fe10437cff526e0dc07ca authored over 15 years ago by David Wojnar <[email protected]>

added zlib support, used in MzMLFile

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5327 6adb6e08-d915-0410-9...

cf20f0179572c1d36f7067f87529dafbc22a621a authored over 15 years ago by David Wojnar <[email protected]>

TOPPAS: input/output mapping dialog now uses dropdown boxes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5326 6adb6e08-d915-0410...

6d9263ea2ee4f2eb49f67fa2954f4c0ac85383b7 authored over 15 years ago by Johannes Veit <[email protected]>

Updated default value for 'max_charge' paramter from 1 to 3.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5325 6adb6e08-d915-0410-9...

87d1f346b7cdc16fd2cac13871b53b652d5e6822 authored over 15 years ago by Marc Sturm <[email protected]>

** fixed isotope matrix bug in simulator

** some cleanup & docu
** added ITRAQAnalyzer to TOPPView tools

git-svn-id: https://open-ms.svn....

ef56b54a746226b33f56874a5824e530a9ab7e43 authored over 15 years ago by Chris Bielow <[email protected]>

Updated Linux installation instructions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5323 6adb6e08-d915-0410-9...

762fdcadcd3ba560352a6d5f2ffae1de3de45a1b authored over 15 years ago by Marc Sturm <[email protected]>

added missing export macros (sorry Chris ;))

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5322 6adb6e08-d915-0410-9...

4cd8cf7439ab05af5ba002c059aa2d561ec745cf authored over 15 years ago by Andreas Bertsch <[email protected]>

** fixed iTRAQ abundance parsing in Simulator

** added synced params to Simulator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open...

bd03e0063f8f1396869169fa4f5d8e9cf2b38beb authored over 15 years ago by Chris Bielow <[email protected]>

TOPPAS: added input/output file/list checks for tools, mapping dialog for edges

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5318 6adb6e08-d915-0410...

6e9022e7d4c1672d95697d35c62fc82295c12f68 authored over 15 years ago by Johannes Veit <[email protected]>

Added functionality to IDFilter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5317 6adb6e08-d915-0410-9...

aaa1259d8ba4f5fe7e9e321dc03aa8d4f3607559 authored over 15 years ago by NicoPfeifer <[email protected]>

extended TraML implementation; small parts of the object model and the parser is missing

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5316 6adb6e08-d915-0410-9...

79044b82691e933d88c258b98da30b68c82ac7f0 authored over 15 years ago by Andreas Bertsch <[email protected]>

added rt model fitting to MRM feature finder

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5315 6adb6e08-d915-0410-9...

45c3ffb3430e0189671bf5b624c805c457e8f8a2 authored over 15 years ago by Andreas Bertsch <[email protected]>

added test and extended TraML implementation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5314 6adb6e08-d915-0410-9...

5a4b8ac3ad0831d70daec6a2ff0988f6cbbdebd0 authored over 15 years ago by Andreas Bertsch <[email protected]>

added some classes for TraML implementation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5312 6adb6e08-d915-0410-9...

6c5c2486ae0d13ddd2b766ac4dc1dec31549cb9a authored over 15 years ago by Andreas Bertsch <[email protected]>

updated tutorial

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5311 6adb6e08-d915-0410-9...

157164331bed9046069ecd9f27c75af68a6b300d authored over 15 years ago by Rene Hussong <[email protected]>

** added Ionization method param to TandemMS module

** fixed bugs and coding convention violations in DigestSimulation
** added TODO's

git-svn-id: h...

b4376b093aa8b1087c6cd4398336228a3a7301fa authored over 15 years ago by Chris Bielow <[email protected]>

added gelML to automatic semantic valdiation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5309 6adb6e08-d915-0410-9...

35dc21bfb97b2506deee6e21ce1f2e8ed418638a authored over 15 years ago by Andreas Bertsch <[email protected]>

changed hardly readable yellow to orange (requirement level should)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5308 6adb6e08-d915-0410-9...

c53afeb264df27dcc45775b036476b29735d8fa2 authored over 15 years ago by Andreas Bertsch <[email protected]>

added bugfix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5307 6adb6e08-d915-0410-9...

595ed3efd93398e70a139ca42dae3bfe615cd3f3 authored over 15 years ago by Andreas Bertsch <[email protected]>

added GelML and TraML file types

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5306 6adb6e08-d915-0410-9...

8f622b58ed74762cb381c35346a6ce9f58896e08 authored over 15 years ago by Andreas Bertsch <[email protected]>

added complete contrib libs for linking against external code

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5305 6adb6e08-d915-0410-9...

a6d79addc29440ca8c6a8847b3f6797fd2f6475b authored over 15 years ago by Andreas Bertsch <[email protected]>

Fixed two errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5304 6adb6e08-d915-0410-9...

c808ed8cf91d0ecb736bc9f48c4bad312a8a7f11 authored over 15 years ago by Marc Sturm <[email protected]>

** added & fixed docu

** added svn eol style
** added (untested) iTRAQ MS2 SIMULATION
** added (untested) iTRAQ intensi...

dd5df7fa1e1036eb9bbc9eb39ebaa80f0d42bc89 authored over 15 years ago by Chris Bielow <[email protected]>

PersistentObject: moved to DB folder; MzMLFile: intensity arrays are stored with 32 bit now, added handling of new MALDI laser terms

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5299 6adb6e08-d915-0410-9...

9f9d5fa2114fd7f6ebb39f7a7a0ab0a218903ca4 authored over 15 years ago by Marc Sturm <[email protected]>

TOPPAS: added single file nodes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5298 6adb6e08-d915-0410...

8f7134e18dce39e557b61f7836a3b9acb6317137 authored over 15 years ago by Johannes Veit <[email protected]>

updated CHANGELOG

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5297 6adb6e08-d915-0410-9...

6e963bd3ca3bc69cf33f46087b9929afa13c0d5b authored over 15 years ago by Marc Sturm <[email protected]>

Drei auf einen Streich

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5296 6adb6e08-d915-0410-9...

2bbef8beb3ee26feeea97bcdf73ed8e57fdb4546 authored over 15 years ago by Marc Sturm <[email protected]>

mzML: updated to latest file version

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5295 6adb6e08-d915-0410-9...

5f3cbd5d1059547d779268ca010acae75f96a602 authored over 15 years ago by Marc Sturm <[email protected]>

mzML: updated files for imzML; ControlledVocabulary: added check for correct names in relationships and units

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5294 6adb6e08-d915-0410-9...

d25d6286ce26f64d2c84ec5b7a85c51520288fc1 authored over 15 years ago by Marc Sturm <[email protected]>

Updated docu with information about contributing

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5293 6adb6e08-d915-0410-9...

d897844129124582857a11c9a1fe322086cc4175 authored over 15 years ago by Marc Sturm <[email protected]>

Param, MetaInfo and MetaInfoInterface values are set via a DataValue now; DataValue: added new constructors for QString and std::string

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5292 6adb6e08-d915-0410-9...

7722cf3e11fb91b1ddcbc8553281a6dab0372f92 authored over 15 years ago by Marc Sturm <[email protected]>

mzML: added two more tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5291 6adb6e08-d915-0410-9...

b31f601f87f1e8aade4a4ea6818969060d54ea53 authored over 15 years ago by Marc Sturm <[email protected]>

Docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5290 6adb6e08-d915-0410-9...

f9ce30d86bc8369b89d26dde8cd999ed6c15f772 authored over 15 years ago by marC_sturm <[email protected]>

Updated images in documentation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5289 6adb6e08-d915-0410-9...

62d0562133497a29285a845ebe547573e5c250f8 authored over 15 years ago by marC_sturm <[email protected]>

Fixed bug - simply use RTBegin method to find the right scan...

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5288 6adb6e08-d915-0410-9...

10ed09e024ea2541c06debc1cf3f505c292c1c53 authored over 15 years ago by marC_sturm <[email protected]>

updated psi-ms.obo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5287 6adb6e08-d915-0410-9...

7965f2891f93eae9c7eadec27de32e58f7e77b96 authored over 15 years ago by Andreas Bertsch <[email protected]>

Sim: dummy precursor selection

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5286 6adb6e08-d915-0410-9...

41f5a2ce68f4f0522176f42ede9b4588de9bd2a0 authored over 15 years ago by Chris Bielow <[email protected]>

Todo changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5285 6adb6e08-d915-0410-9...

1c9c8eeb86ede14dac3ab4c4fbb8fe99d351c29d authored over 15 years ago by marC_sturm <[email protected]>

Removed PeakIcon class

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5284 6adb6e08-d915-0410-9...

2a5dcad6546053ee77bdb337f3150f1bf6776311 authored over 15 years ago by marC_sturm <[email protected]>

Fixed typo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5283 6adb6e08-d915-0410-9...

c04f6414e594145772642c3ea9c844bfe35aca97 authored over 15 years ago by marC_sturm <[email protected]>

Docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5282 6adb6e08-d915-0410-9...

a21533e2638ed8f919e9a7df0b32c065be2acb1d authored over 15 years ago by marC_sturm <[email protected]>

Rewritten intensity iterator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5281 6adb6e08-d915-0410-9...

e9052f09716fd12034f1515a6bc95233e40ad85c authored over 15 years ago by Marc Sturm <[email protected]>

... and fixed the test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5280 6adb6e08-d915-0410-9...

31e5b3d9200211e7bc31e62d5d78066aba665728 authored over 15 years ago by Marc Sturm <[email protected]>

Removed Peak1D_

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5279 6adb6e08-d915-0410-9...

4490fb22a1134c1a92316ca6b3f2b29ae4ab4a43 authored over 15 years ago by Marc Sturm <[email protected]>

improvements to toppas

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5278 6adb6e08-d915-0410...

7d58cbb9975a0bfa7a90ff04fd570347b4f63deb authored over 15 years ago by Johannes Veit <[email protected]>

fixing missing dependencies for executables in debug mode (probably a cmake bug)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5277 6adb6e08-d915-0410-9...

3f762b9c57377405c4d95ac89c3c254057f5c8ef authored over 15 years ago by Chris Bielow <[email protected]>

mzML: Added new terms from imzML group

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5276 6adb6e08-d915-0410-9...

157afff57b0fb06ffec989033ce091735bd05566 authored over 15 years ago by Marc Sturm <[email protected]>

mzML: updated to latest schema version

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5275 6adb6e08-d915-0410-9...

17f5431bb02a271c1f5291e143a56d72fc9fa59a authored over 15 years ago by Marc Sturm <[email protected]>

mzML: Fixed severl minor issues

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5274 6adb6e08-d915-0410-9...

cdc89217d176273f9f954a32365edbe9b973cdba authored over 15 years ago by Marc Sturm <[email protected]>

**fixed COIN-OR seg-fault (never use different compiler flags for intertwined libs - arghh)

**fixed OPENMS as external lib issues
Linux: please test :)

git-svn-id: https://open-ms.svn.sour...

e710abd5ed2d8e6e4bce26889f34c52f05c06713 authored over 15 years ago by Chris Bielow <[email protected]>

fixed strange linking bug.. cmake has its own ways...

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5272 6adb6e08-d915-0410-9...

336ec2e7bc648f986a798423f671272a2a83e3c7 authored over 15 years ago by Chris Bielow <[email protected]>

fixed some external code issues:

- lib name in debug mode
- out-of-source build

git-svn-id: https://open-ms.svn.sourceforge.net/...

a3021a4bf36941033267364c946bb23455c0f9b8 authored over 15 years ago by Chris Bielow <[email protected]>

fixed bug reported by Hendrik; compiler flags are now exportet; maybe additional export follow

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5267 6adb6e08-d915-0410-9...

6a05f630691981b139e535182c5a988e40328066 authored over 15 years ago by Andreas Bertsch <[email protected]>

fixed 2 warings in CompleteLinkage

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5266 6adb6e08-d915-0410-9...

ae3a77d8c4c342f5b7e99407888ae2e1f39d99f3 authored over 15 years ago by Chris Bielow <[email protected]>

Fixed HTML header

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5265 6adb6e08-d915-0410-9...

e42a774eeb37ba58e0e0a9df9d0f570de19bdcd2 authored over 15 years ago by Marc Sturm <[email protected]>

Todo changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5264 6adb6e08-d915-0410-9...

19aeec8cfc9d1c759d406adb251c36613e0acd3f authored over 15 years ago by Marc Sturm <[email protected]>

allow whitespaces around modification definitions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5263 6adb6e08-d915-0410-9...

7cb1ac1d2d65ddf5e45f2b759a697235bf2c2473 authored over 15 years ago by Andreas Bertsch <[email protected]>

redesigned iTRAQ parameter handling (due to shared params with simulator)

Types.h: cleanup

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5262 6ad...

7cbc56298516602557c3b521f56a68928a034f76 authored over 15 years ago by Chris Bielow <[email protected]>

added header

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5261 6adb6e08-d915-0410-9...

da3ca7a614c7a51142e05c8c9484bfa64adffa60 authored over 15 years ago by Andreas Bertsch <[email protected]>

added anyURI to CVTerm types

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5260 6adb6e08-d915-0410-9...

935289d91c975ffa51f381b8b206ca6a5273c5ec authored over 15 years ago by Andreas Bertsch <[email protected]>

Fixed DefaultParamHandlerDocumenter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5259 6adb6e08-d915-0410-9...

7f9cc50df8148555984630967428390f326e2689 authored over 15 years ago by Marc Sturm <[email protected]>

Fixes for GCC 4.4.0

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5258 6adb6e08-d915-0410-9...

b28e14a9673012bf1b1ad5d026ff186be444d94e authored over 15 years ago by Marc Sturm <[email protected]>

Updated to latest MzML version (added fraction identifier term)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5257 6adb6e08-d915-0410-9...

f018e679593337f443699328ce17f42ee4b18fe7 authored over 15 years ago by Marc Sturm <[email protected]>

Fixed test build time; Removed DefaultParamHandler base class from Factory products that did not use it

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5256 6adb6e08-d915-0410-9...

07a61edf4f50e63575c4d3ea966fb74a304ebfab authored over 15 years ago by Marc Sturm <[email protected]>

fixed small bug in simulation classes / improved 1d signal simulation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5255 6adb6e08-d915-0410-9...

446cba05ba438bc234f7e7670754ac82d7123cd6 authored over 15 years ago by Stephan Aiche <[email protected]>

some cleanup;

testing new source_group member in cmake-files

git-svn-id: https://open-ms.svn.sourceforge.net/s...

574dfaf3bae0f786538f556d26b41422183ec135 authored over 15 years ago by Chris Bielow <[email protected]>

Removed FactoryProduct class (we should check if all derived classes really need the DefaultParamHandler base class)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5253 6adb6e08-d915-0410-9...

166d7476c58b49a04ffb9d684948ceb6ccc79a26 authored over 15 years ago by Marc Sturm <[email protected]>

DoubleList: added allowed tolerance parameter for checking if a double is contained

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5252 6adb6e08-d915-0410-9...

45aeff7d12c44c751da5629ae0eb6241667a73bb authored over 15 years ago by Marc Sturm <[email protected]>

added missing Id keyword to simulation tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5250 6adb6e08-d915-0410-9...

2460507e794ad3d744afec6f3fdea6251fc75815 authored over 15 years ago by Stephan Aiche <[email protected]>

renamed RawSignalSim / fixed IonizationSim / fixed small error in RTSim

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5249 6adb6e08-d915-0410-9...

1ea089b0d1f2da919b3509f85d99a6b98c42f7e7 authored over 15 years ago by Stephan Aiche <[email protected]>

Removed Boost iostream support; Fixed some warnings in RangeUtils

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5247 6adb6e08-d915-0410-9...

45fc8ce7a62320416d9440e75336cb52043bf616 authored over 15 years ago by Marc Sturm <[email protected]>

Removed CoinMP unused parameter warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5246 6adb6e08-d915-0410-9...

1f619e9207e80284c3506d4b27c959497c010126 authored over 15 years ago by Marc Sturm <[email protected]>

added Precursor header to range utils

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5245 6adb6e08-d915-0410-9...

77d87cddd45f60fa2c49248da8a8bb26bedb3dac authored over 15 years ago by Andreas Bertsch <[email protected]>

added filter for activation method to FileFilter.C

(TODO: add TOPP test once we switched to mzML)

git-svn-id: https://open-ms.svn.sourceforge.net/s...

e1ce13593fa7a3d35a24f72243dba5a33ee32cfd authored over 15 years ago by Chris Bielow <[email protected]>

Fixed file path

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5242 6adb6e08-d915-0410-9...

96b8839d68a7d86f46aeef0a585413b925329f31 authored over 15 years ago by Marc Sturm <[email protected]>

fixed some small issues / non-RT simulation still does not work

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5241 6adb6e08-d915-0410-9...

af20cb3b8ae87cc1ca445e07cf0b782a2e90c4db authored over 15 years ago by Stephan Aiche <[email protected]>

Fixed some errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5240 6adb6e08-d915-0410-9...

3a73d26b62e9ae4cc18e7bde6666d11f7c5eb9e1 authored over 15 years ago by Marc Sturm <[email protected]>

SIM:

** rebuild RT default model for Simulator
** relocated mz calculation to IonizationSimulation
** ...

6a639e27bc043d346db2d43f0c9887803032bb20 authored over 15 years ago by Chris Bielow <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5238 6adb6e08-d915-0410-941f-83917bcadc18

10483e1858d0f75b42322e51487603314f0a12c7 authored over 15 years ago by Chris Bielow <[email protected]>

** added consensusMap generation to Simulator

** fixed bug in IonizationSimulation
** fixed coding convention violations
** some cleanup

git-s...

c8def6cbadde8faaceef875b982cdb8e09c12d8e authored over 15 years ago by Chris Bielow <[email protected]>

added (inactive) version of 1D simulation / proteins are now stored inside the feature map

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5236 6adb6e08-d915-0410-9...

0187dfe0f5d865877c739be7fe8ff3a1592d752b authored over 15 years ago by Stephan Aiche <[email protected]>

some cleanup

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5235 6adb6e08-d915-0410-9...

971580f8420d7e8dc689372775af52d4fcf6cd18 authored over 15 years ago by Chris Bielow <[email protected]>

added missing std namespace

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5234 6adb6e08-d915-0410-9...

2026fc7ee1f244ddd475832ace8bb53b83fc53ef authored over 15 years ago by Marc Sturm <[email protected]>

** added impure adduct simulation (Na+, NH4+ etc);

** added isnan(), isinf() coding convention
** some docu & removal of unnecessary accessors

git...

436d73f44918722a86456f4c8b097f7bdf04d411 authored over 15 years ago by Chris Bielow <[email protected]>

fixed isnan problem on Mac; use isnan and isinf from boost::math\!; removed isnan and isinf definitions from Types.h

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5232 6adb6e08-d915-0410-9...

49ccc1e1123aceef7e0ef1dbcadccdea7cbdb10d authored over 15 years ago by Andreas Bertsch <[email protected]>

added parsing of DRV and part_of relationships (for brenda)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5231 6adb6e08-d915-0410-9...

829693f2a1bd58b230c1456b12006a4f2a1e6e66 authored over 15 years ago by Andreas Bertsch <[email protected]>

fixed 3 warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5230 6adb6e08-d915-0410-9...

59b3d26f13ba9e9586a97a7767051100396a569d authored over 15 years ago by Chris Bielow <[email protected]>

extented a test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5229 6adb6e08-d915-0410-9...

b3d271caa24d9ab819e54f54967ed2ca39f8d727 authored over 15 years ago by Chris Bielow <[email protected]>

added result files for peakpicking tutorial

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5228 6adb6e08-d915-0410-9...

a4d3fa7367d8283cb5029a05834254b9e51abea5 authored over 15 years ago by Alexandra Zerck <[email protected]>

fixed some warnings; repaired DefaultParamHandler's includes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5227 6adb6e08-d915-0410-9...

bdb1050aad5e13ecb0b61e6c0cca542ae226e293 authored over 15 years ago by Chris Bielow <[email protected]>

added ini and results file for tutorial

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5226 6adb6e08-d915-0410-9...

3af9c2b0d52254bd0c0a63e1ce39de306aba62ba authored over 15 years ago by Alexandra Zerck <[email protected]>