github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

Added new PepXMLFile; Moved ID convertion functionality from FileConverter to IDFileConverter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5446 6adb6e08-d915-0410-9...

900c08c5b41f8b2535aa3da9bc87fc330cd25814 authored over 15 years ago by Marc Sturm <[email protected]>

** fixed warning/bug

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5445 6adb6e08-d915-0410-9...

8ca5ab8412e7566c9750cb1998d3ec28fa7e5b0c authored over 15 years ago by Chris Bielow <[email protected]>

Added some functionality for new pepXML parser

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5444 6adb6e08-d915-0410-9...

ede36e7a7854f460760ada45f7bf11d65c93ce85 authored over 15 years ago by Marc Sturm <[email protected]>

** fixed 4 warings in Base64_TEST/Base64_test.C

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5443 6adb6e08-d915-0410-9...

b4e25bbcd8d6b6ac1d432346a661b8674efa17f4 authored over 15 years ago by Chris Bielow <[email protected]>

fixed docu of IDFileConverter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5442 6adb6e08-d915-0410-9...

b34757bd957cf1a2725e44ffe2cace75a830a873 authored over 15 years ago by Marc Sturm <[email protected]>

New TOPP tool IDFileConverter, which converts results from identificaton engines to IdXML. Currently supports Sequest .out files. Added a workaround in parser for .out files to deal with missing extra protein references (\"+1\" etc.)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5441 6adb6e08-d915-0410-9...

c0bc6a4c284a1c1472a9aeda8d39ff999a5186eb authored over 15 years ago by Clemens Gröpl <[email protected]>

** fixed bug which prevented updating C_ELEMENTS button in TV

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5440 6adb6e08-d915-0410-9...

84de27fa2ad3f7894ae27ac9f7b0243fe2880240 authored over 15 years ago by Chris Bielow <[email protected]>

FFEval: added ROC curve; FFPP: Added max_rt_span parameter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5439 6adb6e08-d915-0410-9...

a3ebe8ef9192529fb6e3c0b6dd9d9644b62dadee authored over 15 years ago by Marc Sturm <[email protected]>

** added metavalues of ConsensusFeatures to status text in TOPPView

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5438 6adb6e08-d915-0410-9...

5d6968abb59c36f2be80337c20318bb369c91f41 authored over 15 years ago by Chris Bielow <[email protected]>

fixed bug were spectrum ids were wrong (native id....)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5437 6adb6e08-d915-0410-9...

913a2aa183e90d9bd0b750d83a5c169075c8653f authored over 15 years ago by Andreas Bertsch <[email protected]>

** fix the fix of Base64

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5436 6adb6e08-d915-0410-9...

2868fe5b0c4175bd5b2dc13998a11eeb828931be authored over 15 years ago by Chris Bielow <[email protected]>

** fixed conversion warnings in Base64 (this needs revision!)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5435 6adb6e08-d915-0410-9...

a30bb315a07c68780979479f438de9ee08f447c9 authored over 15 years ago by Chris Bielow <[email protected]>

changed float to double precision; fixed testing errors introduced by adding ambigous residues

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5434 6adb6e08-d915-0410-9...

17e769a53c9c58fba6dcd7bd30437d63f3706546 authored over 15 years ago by Andreas Bertsch <[email protected]>

added ambiguous amino acids

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5432 6adb6e08-d915-0410-9...

61725561cb7c867c9fef92dc11e89e4a338a086e authored over 15 years ago by Clemens Gröpl <[email protected]>

Fixed some warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5430 6adb6e08-d915-0410-9...

384557ded7bda37e5a52fbbc780a7a6d99e27cf2 authored over 15 years ago by Marc Sturm <[email protected]>

TOPPAS: some refactoring

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5429 6adb6e08-d915-0410...

d1784ee019056df3fd318b95b27d102de8ab2101 authored over 15 years ago by Johannes Veit <[email protected]>

FFEval: added absolute RT tolerance; Spectrum2DCanvas: fixed crash problem in new paining routine (thanks Chris)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5428 6adb6e08-d915-0410-9...

9dc8d4a637640a15b057c521b1c15be956c6b40b authored over 15 years ago by Marc Sturm <[email protected]>

** zoom stack fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5427 6adb6e08-d915-0410-9...

153f63051fe9562de137699e542537985a6452ea authored over 15 years ago by Chris Bielow <[email protected]>

Updated FFEval so that it can handle feature files without convex hulls or even without features

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5426 6adb6e08-d915-0410-9...

5007e3306739f1527176d6e8811978e025bbc7c4 authored over 15 years ago by Marc Sturm <[email protected]>

hopefully fixed error of Chris (at least this was a real bug fix)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5425 6adb6e08-d915-0410-9...

9019506e824af629af357248842ea00cff4d177e authored over 15 years ago by Andreas Bertsch <[email protected]>

fixed wrong name

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5424 6adb6e08-d915-0410-9...

75da65874ec5c6148f1776f2780954c520118992 authored over 15 years ago by Marc Sturm <[email protected]>

updated psi-ms.obo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5423 6adb6e08-d915-0410-9...

609e9ca95e7fc4b0d521e2ae1ff3646b4be7423a authored over 15 years ago by Andreas Bertsch <[email protected]>

** improved Zoom-Stack by also storing last position before zoom

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5422 6adb6e08-d915-0410-9...

3670fd06a240908d63b5dcae48d2f71c790d60f8 authored over 15 years ago by Chris Bielow <[email protected]>

Fixed some checker errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5421 6adb6e08-d915-0410-9...

8a7c24b9a0012c6ce0868c3a0535ecc3336dd4c7 authored over 15 years ago by Marc Sturm <[email protected]>

Added 'isSorted()' methods to MSExperiment and MSSpectrum; Added data sorting checks to PeakPicker, BaselineFilter and NoiseFilter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5420 6adb6e08-d915-0410-9...

76a6b809498d5e32fbb735fd9f0208982b17169e authored over 15 years ago by Marc Sturm <[email protected]>

Updated TOPP tutorial images to mzML format

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5419 6adb6e08-d915-0410-9...

e1371dee502ef1905b67866f90c53b725bbbad04 authored over 15 years ago by Marc Sturm <[email protected]>

converted images to graphml

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5418 6adb6e08-d915-0410-9...

ca2e42ecdf726cc316f3da4370f169e45b54a6c9 authored over 15 years ago by Marc Sturm <[email protected]>

Fix for 32 bit

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5417 6adb6e08-d915-0410-9...

a30cafdaa3cf6fe62a4052870fc7c35dfb1e756c authored over 15 years ago by Marc Sturm <[email protected]>

TOPPAS: minor changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5416 6adb6e08-d915-0410...

e3d1845ec7ce86a65b70ba69c6442f731140dad4 authored over 15 years ago by Johannes Veit <[email protected]>

Cleaning up Base64 a bit more

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5415 6adb6e08-d915-0410-9...

5c57641e8d9bab4eaf6df0dfaa42ffe06e5d2148 authored over 15 years ago by Marc Sturm <[email protected]>

minor changes to Base64

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5414 6adb6e08-d915-0410-9...

17aa43e63aa9603b5a15bc68c1d2b1359606cf40 authored over 15 years ago by Marc Sturm <[email protected]>

Cleanup in Base64 code

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5413 6adb6e08-d915-0410-9...

2892bf33f3e76a5cdbe9ecc3516186c2b2485807 authored over 15 years ago by Marc Sturm <[email protected]>

Added missing exceptions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5412 6adb6e08-d915-0410-9...

d8d081aca0d53044bb5a7e58efc1de5ca22f02a3 authored over 15 years ago by Marc Sturm <[email protected]>

** hopefully fixed failing compilation of FeatureFinder.obj in VS2008 Debug mode

(although it would be better to make FF.obj smaller somehow)

git-svn-id: https://open-ms.svn.sou...

1fe0a5c5d1014f21c96f23a082e720cbabc79c3c authored over 15 years ago by Chris Bielow <[email protected]>

** made charge criterion optional for MapAlignmentEvaluation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5410 6adb6e08-d915-0410-...

91af160542ef030898ba08b7d2a34d35e1dcb4b2 authored over 15 years ago by Chris Bielow <[email protected]>

Fixed wrong types

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5408 6adb6e08-d915-0410-9...

ff266652428b55c45e264df2109f27d7cce749b0 authored over 15 years ago by Marc Sturm <[email protected]>

added zlib support to MzXMLFile

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5407 6adb6e08-d915-0410-9...

5c4db050e4ed574efdd62def68457fd00a094f11 authored over 15 years ago by David Wojnar <[email protected]>

update psi-ms.obo and fixed bug in IDMassAccuracy

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5406 6adb6e08-d915-0410-9...

1d35b0a9a280518e9006373fb8cea68bcfb2423e authored over 15 years ago by Andreas Bertsch <[email protected]>

Hopefully fixed some tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5405 6adb6e08-d915-0410-9...

752e667e9fbf6bdc4a76794ee0a87c97430613e5 authored over 15 years ago by Marc Sturm <[email protected]>

added missing header (abs for integer types is defined in cstdlib, floating point abs's are in cmath...)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5404 6adb6e08-d915-0410-9...

6e38262808366d13ac791130f3c69769f10f70f5 authored over 15 years ago by Andreas Bertsch <[email protected]>

** fixed an error and some warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5403 6adb6e08-d915-0410-9...

62f016b9ebad1b086e6e14c74dc9ccf7671f0b76 authored over 15 years ago by Chris Bielow <[email protected]>

** fixed two warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5402 6adb6e08-d915-0410-9...

ea9df9752de3a13d04fefe9e15d193e17a941a19 authored over 15 years ago by Chris Bielow <[email protected]>

fixed compilation error

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5401 6adb6e08-d915-0410-9...

4d0dfeae788db2754b6fcd80295b74c3c240abf3 authored over 15 years ago by Alexandra Zerck <[email protected]>

added OfflinePrecursorIonSelection and ILPWrapper

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5400 6adb6e08-d915-0410-9...

64d7073403041900d8e689b32feb04e1c691bf5b authored over 15 years ago by Alexandra Zerck <[email protected]>

** fixed a bug in debug mode

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5399 6adb6e08-d915-0410-9...

65b21bed77583cfd731e3fa1bb51bd06bbb87c9c authored over 15 years ago by Chris Bielow <[email protected]>

fixed compilation error

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5398 6adb6e08-d915-0410-9...

4dbad20d25df40a6b5f429a28041973163c6637c authored over 15 years ago by Alexandra Zerck <[email protected]>

** fixed multiple tests

** moved ConsensusFeature content to C file
** new *operator for EmpiricalFormula
** new computeD...

a28e45f6cae1bde49a7081e4ddb7b2ed8bc14eda authored over 15 years ago by Chris Bielow <[email protected]>

FileInfo: added data processing option; MzMLFile: fixed tiny element order bug

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5395 6adb6e08-d915-0410-9...

4d70d78065505538303a8268e26669226c593da1 authored over 15 years ago by Marc Sturm <[email protected]>

Fixed misspelled term names in mzData files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5394 6adb6e08-d915-0410-9...

a97ba167ca2e75607698605ebd739536293f9d8e authored over 15 years ago by Marc Sturm <[email protected]>

Fixed DB TOPP tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5393 6adb6e08-d915-0410-9...

cf5953e2cc60f292efdd9152459e30bfe3aa8b1a authored over 15 years ago by Marc Sturm <[email protected]>

Changed default output format of GUI widgets

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5392 6adb6e08-d915-0410-9...

d1e1e629587b251b69d3c92db8d03e0a5e64cbbe authored over 15 years ago by Marc Sturm <[email protected]>

converted TOPPView tutorial examples to mzData

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5391 6adb6e08-d915-0410-9...

ce5ab659fcf9880848ad1d05847931c150cf668a authored over 15 years ago by Marc Sturm <[email protected]>

Replaced mzData by mzML nearly everywhere

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5390 6adb6e08-d915-0410-9...

7c021dd44c9f1cfb7dc31a5b0f42719f01213abf authored over 15 years ago by Marc Sturm <[email protected]>

Changed the TOPP default format to mzML (except for ID adapters)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5389 6adb6e08-d915-0410-9...

339d94dbdbba8dfd88e3db7daa1969b4ed1ef5f9 authored over 15 years ago by Marc Sturm <[email protected]>

Changed FileMerger output format to mzML

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5388 6adb6e08-d915-0410-9...

ba39c98059c7680c8dba051ecf82a1faa32c7fd4 authored over 15 years ago by Marc Sturm <[email protected]>

Added FileConverter ANDI/MS test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5387 6adb6e08-d915-0410-9...

eaefde862efb1315d39fa2b32e15abd22ed207ea authored over 15 years ago by Marc Sturm <[email protected]>

Updated FileConverter tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5386 6adb6e08-d915-0410-9...

18e119265b9053a3e2d26fdd577000a1508013d2 authored over 15 years ago by Marc Sturm <[email protected]>

Removed includes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5385 6adb6e08-d915-0410-9...

4774c2346e27b3ab82357b6ee1f9ec13f5498bf4 authored over 15 years ago by Marc Sturm <[email protected]>

added DataProcessing to MetaInfoDescription (for mzML)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5384 6adb6e08-d915-0410-9...

a2c1e1969df629c087ff9ec50db4b59776b904a9 authored over 15 years ago by Marc Sturm <[email protected]>

** added missing svn properties

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5383 6adb6e08-d915-0410-9...

7dc7def3548c5585bbc1a2454527d0a9247fc141 authored over 15 years ago by Chris Bielow <[email protected]>

** removed two deprecated classes from old simulator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5382 6adb6e08-d915-0410-9...

ce1e71cad2efe972802739f4be3610dfde0e1b35 authored over 15 years ago by Chris Bielow <[email protected]>

** fixed a bug in MassExplainer.h

** some docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5381 6adb6e0...

6ad055365b580162b8ad1c55e40164e2adf52042 authored over 15 years ago by Chris Bielow <[email protected]>

Removed some members from MetaDataDescription (for MzML)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5380 6adb6e08-d915-0410-9...

5e055fc7898225afffc5a60570316933aa5a1874 authored over 15 years ago by Marc Sturm <[email protected]>

** changed int_dev to Peak2D::IntensityType (formerly Int) in MapAlignmentEvaluation

** added charge as criterion for handle identifier in MapAlignmentEvaluation

git-svn-id: https:/...

57bc5f6b7586cd4b2ebbb617bec1d9f141712f04 authored over 15 years ago by Chris Bielow <[email protected]>

added more modifications for writing

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5378 6adb6e08-d915-0410-9...

612e31746c9e06c6291d1c4d6165a6d7b3610965 authored over 15 years ago by Andreas Bertsch <[email protected]>

Fixed bug where X in sequence causes exception

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5377 6adb6e08-d915-0410-9...

ed79f266e483dbad73ffa33a0266a4f23cd3a7cc authored over 15 years ago by Andreas Bertsch <[email protected]>

Fixed terminal modifications for MascotAdapterOnline

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5376 6adb6e08-d915-0410-9...

74dda04cb46cb10ece61ccfe5fee67ff670e292a authored over 15 years ago by Andreas Bertsch <[email protected]>

** some fixes for VS2010 Beta1, dealing with changes to make_pair() in C++0x

** to NOT explicitly use template arguments for make_pair()! (due to the new perfect forwarding f...

52fad6cd969cba3f0774084dbff86a62fc9e1986 authored over 15 years ago by Chris Bielow <[email protected]>

updated PSI CV

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5374 6adb6e08-d915-0410-9...

662e05b70f45f224ea3484ac4c31a2ed4dd3f4e8 authored over 15 years ago by Andreas Bertsch <[email protected]>

fixed date in XTandem

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5373 6adb6e08-d915-0410-9...

ab2b8eb3f5eb66ad246bbf040e6638bf680203ed authored over 15 years ago by Andreas Bertsch <[email protected]>

update psi-mod

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5372 6adb6e08-d915-0410-9...

3570347c0dbcacfe3edee5f29b6045448a92f931 authored over 15 years ago by Andreas Bertsch <[email protected]>

added RT model parameters to MRM features

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5371 6adb6e08-d915-0410-9...

d64f33239b395df6e920f6686d9ac9b90c43d823 authored over 15 years ago by Andreas Bertsch <[email protected]>

added RT model parameters to MRM features

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5370 6adb6e08-d915-0410-9...

0eaa0a581e69282d95dbbfd26c688f2e87921643 authored over 15 years ago by Andreas Bertsch <[email protected]>

fixed error in modifications handling

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5369 6adb6e08-d915-0410-9...

2ad0b3b0086647f012ce73133c7e813efdef4c62 authored over 15 years ago by Andreas Bertsch <[email protected]>

Fixed problem with MzXML

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5368 6adb6e08-d915-0410-9...

7aaab6b88673d6a02b471391072352cb2196eec5 authored over 15 years ago by Marc Sturm <[email protected]>

isotopes now possible with EmpiricalFormula (and therefore Residue, AASequence and Modifications...)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5367 6adb6e08-d915-0410-9...

48f89c252bb2d3054eb1a89ee16582568cc68773 authored over 15 years ago by Andreas Bertsch <[email protected]>

fixed N-term modifications in AASequence

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5366 6adb6e08-d915-0410-9...

54e3ddbaefe73b5da2ff37b9229e07bb8ab7a135 authored over 15 years ago by Andreas Bertsch <[email protected]>

** fixed some warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5365 6adb6e08-d915-0410-9...

e7fcbe7fb8c96367806683195d6061d618391409 authored over 15 years ago by Chris Bielow <[email protected]>

added some features to TraML implementation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5364 6adb6e08-d915-0410-9...

7fbb829707274553d0bbba9ddc68ca48b18ded36 authored over 15 years ago by Andreas Bertsch <[email protected]>

** fixed two tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5363 6adb6e08-d915-0410-9...

99c4180d48c291c5776b2f2e1c418cb4e8901db0 authored over 15 years ago by Chris Bielow <[email protected]>

MzML: updated to latest cv and mapping file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5362 6adb6e08-d915-0410-9...

8af7225685dd66042862976e17af4e30a95337ed authored over 15 years ago by marC_sturm <[email protected]>

Docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5361 6adb6e08-d915-0410-9...

712f299b119165da4312bd36a8957151498914d7 authored over 15 years ago by Marc Sturm <[email protected]>

Fixed typo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5360 6adb6e08-d915-0410-9...

980a4dc9ec13c23ba253b067dece44966e2bd78d authored over 15 years ago by Marc Sturm <[email protected]>

MzMLFile: updated to latest CV and mapping file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5359 6adb6e08-d915-0410-9...

6fb90012c0569c16e7400968ac7170f02405c974 authored over 15 years ago by Marc Sturm <[email protected]>

Fixed TOPP tests (DataProcessing went berserk)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5358 6adb6e08-d915-0410-9...

810cc756544aa8bb2b64120770819cf5e9968caf authored over 15 years ago by Marc Sturm <[email protected]>

Added data processing information to TOPP tools

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5357 6adb6e08-d915-0410-9...

7a6667c2c092f86e0a49478051b156a6bfa435d9 authored over 15 years ago by Marc Sturm <[email protected]>

** decharging speedup

** minor fixes (Docu & Variable Types)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/o...

836b61f08b0bcbeab6c5d56d63b23fa72b73ff81 authored over 15 years ago by Chris Bielow <[email protected]>

Todo changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5355 6adb6e08-d915-0410-9...

ae0da81b9f3b8d539b8eadae5ac9e2d7c43a0d7c authored over 15 years ago by Marc Sturm <[email protected]>

Removed watershed FF (no further development)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5354 6adb6e08-d915-0410-9...

8270749a48da01530c4842c5d512156e2a707611 authored over 15 years ago by Marc Sturm <[email protected]>

Fixed bug in assignment

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5353 6adb6e08-d915-0410-9...

4955d9a07879eb0caa17e3ec01c4be182367666e authored over 15 years ago by Marc Sturm <[email protected]>

Merged DSpectrum into MSSpectrum; Improved docu of KERNEL

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5352 6adb6e08-d915-0410-9...

242c54ebcd967c13d6b8b5d1ba07d7457736c66c authored over 15 years ago by Marc Sturm <[email protected]>

Fixed Windows problem in DBAdapter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5351 6adb6e08-d915-0410-9...

7711c9f4364c45c2336eec39036567ca024c0963 authored over 15 years ago by Marc Sturm <[email protected]>

updated to new version

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5350 6adb6e08-d915-0410-9...

49e06bf674df3983bddb42fc6ef9005d4f26de2c authored over 15 years ago by Andreas Bertsch <[email protected]>

extended TraML implementation; 80% complete

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5349 6adb6e08-d915-0410-9...

5d44a2fb4e25e060ede5a9fced22d8a292675c4c authored over 15 years ago by Andreas Bertsch <[email protected]>

more DB fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5348 6adb6e08-d915-0410-9...

4d647c80286aa36f79f61b5ab67a804d388c85ff authored over 15 years ago by Marc Sturm <[email protected]>

Fixed some DB errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5347 6adb6e08-d915-0410-9...

e2b12942c93a84854bc6d9978a6166b71d7b96f8 authored over 15 years ago by Marc Sturm <[email protected]>

DBAdapter_test expansion

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5346 6adb6e08-d915-0410-9...

74c316cb40047caab638003e74a596e0a9845c79 authored over 15 years ago by Mathias Walzer <[email protected]>

mzMLFile: fixed bug of missing RTs; Spectrum2DCanvas: fixed bug in painting routine

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5345 6adb6e08-d915-0410-9...

558dbf8164b61ce54dcac313cc72c18fbce95ee6 authored over 15 years ago by Marc Sturm <[email protected]>

** some docu & cleanup for decharging

** improved DLLAPI docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@5...

5703193e11e7279a3b3b66d6997f08a38198637f authored over 15 years ago by Chris Bielow <[email protected]>

** simulator param reordering

** VS2010 code adaption (String.C), although the compiler is so buggy we will not be able to supp...

2e85a2f87d884e254afddc993506f633bdc1ba50 authored over 15 years ago by Chris Bielow <[email protected]>