Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/OpenMS/OpenMS

The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS

added QtTest library to Mac OS fix-scripts

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6850 6adb6e08-d915-0410-9...

7ca2288e92941854a2f8b55fddfef4c15d01a8e3 authored over 14 years ago by Stephan Aiche <[email protected]>
fixed checker error

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6849 6adb6e08-d915-0410-9...

c5a694facaf6a1c47957d4fac7afe1345b35fd0d authored over 14 years ago by Alexandra Zerck <[email protected]>
fixed missing ids and eol-styles

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6848 6adb6e08-d915-0410-9...

ab50e8e77cf8c0170f4569d3fce92d2fb3bd22ce authored over 14 years ago by Stephan Aiche <[email protected]>
reverted setByUser replacement

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6847 6adb6e08-d915-0410-9...

65b6f4bee48f740e2f896456eba4ff64548f0072 authored over 14 years ago by Andreas Bertsch <[email protected]>
entered myself as maintainer

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6846 6adb6e08-d915-0410-9...

e2c3c31a84a910bfaa995c4045a8ea6b4feab50f authored over 14 years ago by Alexandra Zerck <[email protected]>
fixed FileFilter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6845 6adb6e08-d915-0410-9...

c861aa811a6394596ad9f8b75a2f6ea2a4cd2583 authored over 14 years ago by Andreas Bertsch <[email protected]>
fixed compilation issues

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6844 6adb6e08-d915-0410-9...

923caa6787f97aee996c62263c19b3132e766b40 authored over 14 years ago by Andreas Bertsch <[email protected]>
** CLUSTERING/ClusterAnalyzer.C fixed warning

** SpectraMerger: added block method, fixed some bugs
** Common param handling: fixed a bug, adde...

785f5e34b127746ea0dde08b385fa58a4a456143 authored over 14 years ago by Chris Bielow <[email protected]>
added default value to appease checker script

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6841 6adb6e08-d915-0410-9...

eeda1920e0e2fa56562c2b7844abb4174112150d authored over 14 years ago by Hendrik Weisser <[email protected]>
tiny changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6840 6adb6e08-d915-0410-9...

a7c80464019df7d376534bc4d85a7935b24c79f8 authored over 14 years ago by Andreas Bertsch <[email protected]>
changes to SpectraMerger; still very buggy

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6839 6adb6e08-d915-0410-9...

bfcf5fe6388328b1a7bd70d139df863cd26855ee authored over 14 years ago by Andreas Bertsch <[email protected]>
added first part of new parameter handling

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6838 6adb6e08-d915-0410-9...

6d3f615c8ffdd7a3139feead788e642dfd7b6594 authored over 14 years ago by Andreas Bertsch <[email protected]>
fixed checker error

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6837 6adb6e08-d915-0410-9...

89b2f923e6731bf4ece813bf0ba99aa0b969405a authored over 14 years ago by Alexandra Zerck <[email protected]>
entered myself as maintainer of eva's classes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6836 6adb6e08-d915-0410-9...

2117207a9d6ec21971a21b4c8b9c7a15e7186747 authored over 14 years ago by Alexandra Zerck <[email protected]>
entered myself as maintainer of eva's classes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6835 6adb6e08-d915-0410-9...

7d38d3f020c283c9244c4f6bc312774107472fd6 authored over 14 years ago by Alexandra Zerck <[email protected]>
entered myself as maintainer of eva's classes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6834 6adb6e08-d915-0410-9...

542cfb06b3283dd73e3898963aec9ed6b6e3a717 authored over 14 years ago by Alexandra Zerck <[email protected]>
fixed temp path problems

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6833 6adb6e08-d915-0410-9...

414e7eb4c312395d6132286c6f5456a14151bd55 authored over 14 years ago by Andreas Bertsch <[email protected]>
Bugfix because of test failure

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6832 6adb6e08-d915-0410-9...

ebe13e81b163d505505f54f0f1d952e61141a34f authored over 14 years ago by Steffen Sass <[email protected]>
** fixed some checker errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6831 6adb6e08-d915-0410-9...

46533bde59738d88603b5fc76c1bf852cd75dd1c authored over 14 years ago by Chris Bielow <[email protected]>
modified checker script to also complain about missing tests for nested classes #58

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6830 6adb6e08-d915-0410-9...

0881084f6c41d537b4561138898b330944dd56aa authored over 14 years ago by Stephan Aiche <[email protected]>
updated maintainer information; see retreat logs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6829 6adb6e08-d915-0410-9...

a5c244f608fbda600de4812d7bf25618b91bd093 authored over 14 years ago by Andreas Bertsch <[email protected]>
changed method-test-name since it was not renamed in [6596] and now produces checker errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6828 6adb6e08-d915-0410-9...

95d1949f6ab18336d9915dc9ad78f01839356053 authored over 14 years ago by Stephan Aiche <[email protected]>
** fixed OMSSAAdapter.C

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6827 6adb6e08-d915-0410-9...

837ca9f3e6e11eb88009e374c81824d3c4fc0cca authored over 14 years ago by Chris Bielow <[email protected]>
updated with recent changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6826 6adb6e08-d915-0410-9...

37ed194cafcfc1341739eae63917c536a7473769 authored over 14 years ago by Hendrik Weisser <[email protected]>
** fixed FileConverter Bug

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6825 6adb6e08-d915-0410-9...

bf1dc6adc428f31cdd2520a04153ce665698f3c6 authored over 14 years ago by Chris Bielow <[email protected]>
** removed tmp path from MascotAdapterOnline

** smaller stuff

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6824 6ad...

85c69ec3518317fc59102f18d80d84e99d93c245 authored over 14 years ago by Chris Bielow <[email protected]>
changed estimation of start parameters for EGHFitter1D

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6823 6adb6e08-d915-0410-9...

38c4ac8b3bc798aec1563db2ca4b12fe93bb8fa1 authored over 14 years ago by Stephan Aiche <[email protected]>
added EGH Model and Fitter to DefaultParamHandler

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6822 6adb6e08-d915-0410-9...

a0845bfaeb00eb25ab4bb4aacf7bb8e5b7facd58 authored over 14 years ago by Stephan Aiche <[email protected]>
minor changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6821 6adb6e08-d915-0410-9...

b81c452a61ffb1298b6cd79b770ef3e18188f10a authored over 14 years ago by Alexandra Zerck <[email protected]>
IDPosteriorErrorProbability now with a Parameter for switching plots on and off.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6820 6adb6e08-d915-0410-9...

5d7e1a608bed4d16439f94270c15b2407f7025a1 authored over 14 years ago by David Wojnar <[email protected]>
fixed compilation issue

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6819 6adb6e08-d915-0410-9...

6bf97bb51ab15c32f808979cc7c1e3289da01edd authored over 14 years ago by Andreas Bertsch <[email protected]>
** Common System Param handling part #1

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6818 6adb6e08-d915-0410-9...

2642b18b097e74741db30de8b2d605eaddc58f57 authored over 14 years ago by Chris Bielow <[email protected]>
fixed compilation issue

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6817 6adb6e08-d915-0410-9...

cf8c9427c11a6ead1b6688d10388bacecc3e6b69 authored over 14 years ago by Andreas Bertsch <[email protected]>
extended protein group concept

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6816 6adb6e08-d915-0410-9...

69b9c28d04c694b80f99c2ca0937476e6dc8987d authored over 14 years ago by Hendrik Weisser <[email protected]>
small docu improvement

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6815 6adb6e08-d915-0410-9...

a5e9f995af6eb414fb475f5dc163f2d069091158 authored over 14 years ago by Hendrik Weisser <[email protected]>
minimal refactoring

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6814 6adb6e08-d915-0410-9...

b7f5104406f75d4f8253eb0b3ab7c0233e4e2dd0 authored over 14 years ago by Hendrik Weisser <[email protected]>
** fixed ambigous exp() call

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6813 6adb6e08-d915-0410-9...

bcb3a83978921863ef58e0a9b70d484ef9da002f authored over 14 years ago by Chris Bielow <[email protected]>
** potential ModelFitter bug fixed, reported by MedicWave

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6812 6adb6e08-d915-0410-9...

52f2c0407b44c3b92390ffb099f17d2ccfb3d2a2 authored over 14 years ago by Chris Bielow <[email protected]>
fixed TOPP tests of IDPosteriorErrorProbility

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6811 6adb6e08-d915-0410-9...

00f35abe96b5dc596ab080647743ce1633d244cf authored over 14 years ago by Andreas Bertsch <[email protected]>
** help help!!! (for TOPP usage help)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6810 6adb6e08-d915-0410-9...

60b2be13e66249a93340151472b6ebf220e1aed2 authored over 14 years ago by Chris Bielow <[email protected]>
longer docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6808 6adb6e08-d915-0410-9...

388613b9927ea67b6b4e0f6f5f6322cb25eacacc authored over 14 years ago by David Wojnar <[email protected]>
small docu fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6807 6adb6e08-d915-0410-9...

dade90737188a1b2ec2f7074c5adb6991bb79d51 authored over 14 years ago by Hendrik Weisser <[email protected]>
SILACAnalyzer2: ratio-intensity debug plot added

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6806 6adb6e08-d915-0410-9...

3be900d5b69bb26170cb18f3e2f8ea4e7a89c2f9 authored over 14 years ago by Lars Nilse <[email protected]>
Mixture model and TOPP-tool: IDPosteriorErrorProbability

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6805 6adb6e08-d915-0410-9...

86d5eea2dd4313ed2a734cfadb8b3b5139c7e83d authored over 14 years ago by David Wojnar <[email protected]>
docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6803 6adb6e08-d915-0410-9...

837e0706c19c6bd61d89f55e591bdf10aed30738 authored over 14 years ago by Alexandra Zerck <[email protected]>
** fixed bug #136

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6802 6adb6e08-d915-0410-9...

b270cc370287b960d2640c51f392a0926a90d55f authored over 14 years ago by Chris Bielow <[email protected]>
docu changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6801 6adb6e08-d915-0410-9...

ae83e99461290d2ee3431089d602533d97988f15 authored over 14 years ago by Alexandra Zerck <[email protected]>
fixed compilation issue...

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6800 6adb6e08-d915-0410-9...

c6e7b48f94bd0e6714f4e6f3f13d7ed2c0780164 authored over 14 years ago by Andreas Bertsch <[email protected]>
changes @ SpectraMerger

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6799 6adb6e08-d915-0410-9...

fcbd36b1d7b4937e2eb29cba6c0bd78829bc5d20 authored over 14 years ago by Andreas Bertsch <[email protected]>
fixed documenter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6798 6adb6e08-d915-0410-9...

f547d365401c8dc04a3c5fd18dd9e10711b8fd25 authored over 14 years ago by Andreas Bertsch <[email protected]>
minor changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6797 6adb6e08-d915-0410-9...

a0d4d564cf70eea53dc45042bf782073738c4146 authored over 14 years ago by Alexandra Zerck <[email protected]>
removed unnecessary file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6796 6adb6e08-d915-0410-9...

2c257ef911eb24bc9db29b342eaf18a97c9ea303 authored over 14 years ago by Alexandra Zerck <[email protected]>
added inclusion/exclusion list functionality and test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6795 6adb6e08-d915-0410-9...

86777143c5bad78436f670fa3f69ae73156d7850 authored over 14 years ago by Alexandra Zerck <[email protected]>
updated spectra merger; some minor changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6793 6adb6e08-d915-0410-9...

c7c908d4b38747f13759203c7ccf5eb00d81f0c6 authored over 14 years ago by Andreas Bertsch <[email protected]>
added targeted subfolder; move targeted stuff into this folder

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6792 6adb6e08-d915-0410-9...

adf7aa721527e5812674c803f0392c2ab64ba644 authored over 14 years ago by Andreas Bertsch <[email protected]>
** fixed skipping of empty lines

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6791 6adb6e08-d915-0410-9...

222b1f421897bef288eb1f908445f8117feb0c1c authored over 14 years ago by Chris Bielow <[email protected]>
added option to use peptide mass for m/z positions of seeds derived from peptide IDs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6790 6adb6e08-d915-0410-9...

2d8d540edb081fdef11fb0706b3a740a443826c8 authored over 14 years ago by Hendrik Weisser <[email protected]>
adde .TOPP.ini implementations

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6788 6adb6e08-d915-0410-9...

e6dc55438bb9a11aea0d2433f20ba412b7b35bfd authored over 14 years ago by Andreas Bertsch <[email protected]>
** fixed FileHandler_test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6787 6adb6e08-d915-0410-9...

7d4d284cbf68d58e7845469d124842852c729dbc authored over 14 years ago by Chris Bielow <[email protected]>
rt prediction now works in chunks when too many sequences are entered

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6786 6adb6e08-d915-0410-9...

9928ed285bf3aa56959144c242d4a0804f818a7f authored over 14 years ago by Alexandra Zerck <[email protected]>
small correction

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6785 6adb6e08-d915-0410-9...

43f62df927572e563b59e7dbf207947981a5eca9 authored over 14 years ago by Hendrik Weisser <[email protected]>
idXML display: added option to toggle between precursor and theoretical peptide mass

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6784 6adb6e08-d915-0410-9...

398c96440c64208b478007b972eb9000d9910598 authored over 14 years ago by Hendrik Weisser <[email protected]>
** SpectraMerger docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6783 6adb6e08-d915-0410-9...

793d9f0a9e2c88f8d74744aaddf91ea06d5cff10 authored over 14 years ago by Chris Bielow <[email protected]>
fixed compilation issues

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6782 6adb6e08-d915-0410-9...

dca956140c112ea3ba5bbc015936c35e58336ced authored over 14 years ago by Andreas Bertsch <[email protected]>
** fixed PeptideIndexer compilation error

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6781 6adb6e08-d915-0410-9...

4a050c9aae5865c99c8336f23867ea7b9512cc88 authored over 14 years ago by Chris Bielow <[email protected]>
Added support for resource files in TOPPAS / ExecutePipeline (allow to apply workflows on different datasets)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6780 6adb6e08-d915-0410...

55b9a36bd5a915a4ea71fb02b535cb9b29079378 authored over 14 years ago by Johannes Veit <[email protected]>
added rudimentary support for idXML display

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6779 6adb6e08-d915-0410-9...

c45855bf9bf4a5f7ce4f3da5822d5c52f80fd4dc authored over 14 years ago by Hendrik Weisser <[email protected]>
** removed TextImporter

** more robust file import

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenM...

0195a98868c4464c1f51326e9caa59dd95b4d7be authored over 14 years ago by Chris Bielow <[email protected]>
improved debug output

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6777 6adb6e08-d915-0410-9...

faa0297d745cd702a0429b982b8240114dffde92 authored over 14 years ago by Hendrik Weisser <[email protected]>
bug in SILACAnalyzer2 corrected

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6776 6adb6e08-d915-0410-9...

6ee2016aad9ef9a9a4f5357f3079007f70985b28 authored over 14 years ago by Lars Nilse <[email protected]>
updated peptide indexer

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6775 6adb6e08-d915-0410-9...

bf230e4eabeec68efe1c8a9f3d1df84779782099 authored over 14 years ago by Andreas Bertsch <[email protected]>
replaced the suffx array based matching by the Aho-Corasick implementation of SeqAn.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6774 6adb6e08-d915-0410...

b27d2860f2a5806cbac3a8f7a0d9e019a0e3f01a authored over 14 years ago by Oliver Kohlbacher <[email protected]>
added deployment target to make mac binaries compatible with leopard and removed unused License.txt in cmake/MacOSX

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6773 6adb6e08-d915-0410-9...

3ea9e19743ee161a0160a8c96212ca50e3630f04 authored over 14 years ago by Stephan Aiche <[email protected]>
included unassigned peptides in featureXML export

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6772 6adb6e08-d915-0410-9...

899a671179fa993352b2e0d2f1ac3164ed5142b3 authored over 14 years ago by Hendrik Weisser <[email protected]>
updates spectra merger

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6771 6adb6e08-d915-0410-9...

c0ea60ffb2ac53d3756ddca5bf379fb4d3a19bcf authored over 14 years ago by Andreas Bertsch <[email protected]>
** bugFix: TextImporter for MacOS (\r) formatted files

** OpenMS info with temp and user dir

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/o...

4d7bfd12b740070ebaffe130d325e24499983bca authored over 14 years ago by Chris Bielow <[email protected]>
improved docu of precursor mass corrector

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6769 6adb6e08-d915-0410-9...

625cc969d54c0ee751f036283dfe158ebb5f7d96 authored over 14 years ago by Andreas Bertsch <[email protected]>
added SpectraMerger classes and TOPP-tool

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6768 6adb6e08-d915-0410-9...

44697339f60f8e49605379474c823804e8dc3167 authored over 14 years ago by Andreas Bertsch <[email protected]>
** docu (xTandem version restriction)

** TOPPAS: calls are printed to console

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/...

887e6172e3a026a41248584f72ed5ef74f8511af authored over 14 years ago by Chris Bielow <[email protected]>
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6765 6adb6e08-d915-0410-941f-83917bcadc18

f40377395006dcad169cfcf24757327071e2ea78 authored over 14 years ago by Steffen Sass <[email protected]>
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6762 6adb6e08-d915-0410-941f-83917bcadc18

6f0871a9873a10fb7d341bb77471076b956d252f authored over 14 years ago by Steffen Sass <[email protected]>
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6761 6adb6e08-d915-0410-941f-83917bcadc18

53cd26cb7ab965fe83c344253bd047667173c341 authored over 14 years ago by Steffen Sass <[email protected]>
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6760 6adb6e08-d915-0410-941f-83917bcadc18

3938aa38152af15a6f191ef4efb972024588fe01 authored over 14 years ago by Steffen Sass <[email protected]>
minor changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6758 6adb6e08-d915-0410-9...

847e6ffc9d0b7a75bf7d19ab3485129351c3ad1e authored over 14 years ago by Alexandra Zerck <[email protected]>
docu improvement

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6757 6adb6e08-d915-0410-9...

a72eb88e269bd2dc8e7aeb3b16aab4afb56e9082 authored over 14 years ago by Alexandra Zerck <[email protected]>
** docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6755 6adb6e08-d915-0410-9...

592647ad94a00288512cc167b26461b1751d5749 authored over 14 years ago by Chris Bielow <[email protected]>
fixed bug 71 ("MapAlignmentAlgorithm: transforming feature map doesn't affect unassigned peptides"); test case still missing

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6754 6adb6e08-d915-0410-9...

95480bf24dcdd7d9bc0048a6bfce32ca7a00439e authored over 14 years ago by Hendrik Weisser <[email protected]>
small docu fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6753 6adb6e08-d915-0410-9...

90bcee3d7aa739f65fc81b4049ceb37f91c0d155 authored over 14 years ago by Hendrik Weisser <[email protected]>
docu improvement

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6752 6adb6e08-d915-0410-9...

fe361b8d63367690dd31c1eb262d98b91bbd62d0 authored over 14 years ago by Alexandra Zerck <[email protected]>
small docu improvement

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6751 6adb6e08-d915-0410-9...

189d4bc54c62a69e8b9ac2c58011dedbb38f01c2 authored over 14 years ago by Hendrik Weisser <[email protected]>
** FAQ

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6750 6adb6e08-d915-0410-9...

352d8a48c7287ef1199b80bfe3bd25e68b074b57 authored over 14 years ago by Chris Bielow <[email protected]>
** FAQ update

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6749 6adb6e08-d915-0410-9...

776e66bd08b16195e85cd03d506ce2cb10644cb2 authored over 14 years ago by Chris Bielow <[email protected]>
** minor stuff

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6748 6adb6e08-d915-0410-9...

75af40a8367f84f8509d089f2461a785e7909065 authored over 14 years ago by Chris Bielow <[email protected]>
** fixed bug in TextExporter, causing it to run indefinitely when no identifications were present and -consensus_features was specified as output

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6747 6adb6e08-d915-0410-9...

16088b2cfd60b68cb7d2958966ffde111e24756a authored over 14 years ago by Chris Bielow <[email protected]>
** OMSSAAdapter fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6746 6adb6e08-d915-0410-9...

fefb2ab5634e10b794d510fd200f505fa8ebddf8 authored over 14 years ago by Chris Bielow <[email protected]>
** FAQ update

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6745 6adb6e08-d915-0410-9...

ff57dfca9a1bef9a4290c450980804ad6618f8fa authored over 14 years ago by Chris Bielow <[email protected]>
enabled precursor mz estimation as default;

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6744 6adb6e08-d915-0410-9...

0a90ce9c8638bf07b34a64b88204c9dcb05ca099 authored over 14 years ago by Andreas Bertsch <[email protected]>
added InclusionExclusionlistCreator to TOPPtool list

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6735 6adb6e08-d915-0410-9...

f333299d86c342901b40f0809e4f01623e498eaf authored over 14 years ago by Alexandra Zerck <[email protected]>
added first version of InclusionExclusionlistCreator, currently only exclusion list creation works

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6734 6adb6e08-d915-0410-9...

ecf2075ede88b8e551a3a1717b8382c99917b567 authored over 14 years ago by Alexandra Zerck <[email protected]>
** fixed bug in MascotAdapterOnline.C (specifying a non-existing temp_data_directory will lead to failure (ok) but a non-specific error message (not ok) )

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@6733 6adb6e08-d915-0410-9...

7dc8f8940c7c9aa28c2d12f80258a907f547e103 authored over 14 years ago by Chris Bielow <[email protected]>