github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

SpectraMerger description, IdentificationViewWidget filtering

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7596 6adb6e08-d915-0410-9...

77c04a8823649ccc05cfeb3c37f40c1031239c0a authored almost 14 years ago by Timo Sachsenberg <[email protected]>

adapted the selection of precurseor. The intensity now corresponds to the intensity of the highest peak of the feature in the actual scan

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7593 6adb6e08-d91...

52b2e43b2e86ff9d4cf700949347527c14b19191 authored almost 14 years ago by Sandro Andreotti <[email protected]>

** fixed "Open Containing Folder" feature in TOPPAS (some path's had invalid format)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7592 6adb6e08-d915-0410-9...

ea1bd265b4f28962dc80e95932c5f4e3b985bae9 authored almost 14 years ago by Chris Bielow <[email protected]>

** fixed segfault in IDPosteriorErrorProbability

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7591 6adb6e08-d915-0410-...

27e2cafb5a704787c47607313971c31074d0bf26 authored almost 14 years ago by Chris Bielow <[email protected]>

changed envelope width estimation to a scan-by-scan scheme; added upper bound for gap filling

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7590 6adb6e08-d915-0410-9...

8f43dc9eb7d7b01df4f194472ba5a7d3ba96d06b authored almost 14 years ago by Rene Hussong <[email protected]>

spelling fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7589 6adb6e08-d915-0410-9...

ff22ea057e409e3d91ad55949727b8c9eab64f8d authored almost 14 years ago by Hendrik Weisser <[email protected]>

SIM:

** added correct charge for annotated ID's
** small docu fixes

git-svn-id: https://open-ms.svn.s...

efb292fc3101b2c513920f177491011b7f4426a1 authored almost 14 years ago by Chris Bielow <[email protected]>

added option to restrict the maximum block size in rt dimension

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7587 6adb6e08-d915-0410-9...

9b9db7a23abd2e5b24f5c0d18144d9cc20aa98f7 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

** fixed TOPPAS bug (wrong restoring of explained edge file names)

** some more ReadMe for ttd files #223

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/o...

ac38a340d049ba274a0949120cac4725e3b03fed authored almost 14 years ago by Chris Bielow <[email protected]>

**fixed mail.ttd \n **fixed compile error in source/VISUAL/SpectraIdentificationViewWidget.C

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7585 6adb6e08-d915-0410-9...

8f45c80a94998692f38cbba8c66e46660ac0f991 authored almost 14 years ago by Chris Bielow <[email protected]>

** added dynamic external tools to GenericWrapper

** redesign of ttd files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS...

4871e3ce668736a6ec26446b0ee263fceb8a9085 authored almost 14 years ago by Chris Bielow <[email protected]>

added method to invert RT transformations

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7583 6adb6e08-d915-0410-9...

a6ddc154ed3494f58a5ff9bec05fcc24f21afdbd authored almost 14 years ago by Hendrik Weisser <[email protected]>

Bug 221 fixed. Some minor modifications to identification view

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7582 6adb6e08-d915-0410-9...

dece8ea0790b0927921e81dadd6bcd750c00fa3c authored almost 14 years ago by Timo Sachsenberg <[email protected]>

New view for manual identifications (load mzML then annotate with identifications) - experimental

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7580 6adb6e08-d915-0410-9...

46f2f38ab487af41346ed7da3dcbac1be6a3b0c3 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

* minor change in modification handling of SILAC labeler

* fixed output of consensus computation in BaseLabeler
* fixed warning in ToolDescriptionHandle...

1078a5e3da352eca2e16fc04e46d50cdd25c4a67 authored almost 14 years ago by Stephan Aiche <[email protected]>

** fixed problem with charge loop

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7577 6adb6e08-d915-0410-9...

d101d74fbac5fc3b432f90615256e09ebdcebf52 authored almost 14 years ago by David Wojnar <[email protected]>

* made LogStream caching thread safe (#215 and #217)

* fixed warning from RawMSSignalSimulation_test
* added TODO to SILACLabeler

git-svn-id: https...

7f28d9d408caf31d7135f2c459420ca6e9cfa5b7 authored almost 14 years ago by Stephan Aiche <[email protected]>

** fixed segfault in PosteriorProbability (something still fishy)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7575 6adb6e08-d915-0410-9...

4aae19126ffdd2012c0f31ef07a3042c52df71e9 authored almost 14 years ago by Chris Bielow <[email protected]>

** fixed #218

** allow unsorted (in RT and m/z) maps as input to FeatureFinder - throwing an Exception when the...

12c6857efac902b3db820999d3d3fb744449c0fa authored almost 14 years ago by Chris Bielow <[email protected]>

** fixed segfault in EGHTraceFitter, BUT there's still pitfalls in there

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7573 6adb6e08-d915-0410-9...

be6be26399937d0963dfe4c689ff1f95367afcce authored almost 14 years ago by Chris Bielow <[email protected]>

merged commit [7570] to fix wrong height in HEAD version of EGHTraceFitter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7572 6adb6e08-d915-0410-9...

cec7c8811e58881ede250b1474bcf58882abe2eb authored almost 14 years ago by Stephan Aiche <[email protected]>

merged commit [7559] to prepare fix of EGHTraceFitter in commit [7570]

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7571 6adb6e08-d915-0410-9...

15350a198bb1aefb46d7f9ce4244d039b2817788 authored almost 14 years ago by Stephan Aiche <[email protected]>

fixed wrong max value in initial parameter guess of EGH Trace Fitter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7570 6adb6e08-d915...

2683975a649e69b933f46ff609e6af16c0ea5c06 authored almost 14 years ago by Stephan Aiche <[email protected]>

Bug 213

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7569 6adb6e08-d915-0410-9...

f10aa6a45d36febfc737040870a8b20d0c991a23 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

merged fix for correct consensus computation into sim branch

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7568 6adb6e08-d915...

b9c6507ebb13a230f6f3e6f3494e0095226d8dab authored almost 14 years ago by Stephan Aiche <[email protected]>

added some minor comments

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7567 6adb6e08-d915-0410-9...

59d204d1c2206c9d3bdb4943edb7e966c664b09b authored almost 14 years ago by Rene Hussong <[email protected]>

corrected some warnings; added tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7566 6adb6e08-d915-0410-9...

4c10d332d21a99f67bc64e47a52049d614818c80 authored almost 14 years ago by Rene Hussong <[email protected]>

gnuplot support for target and decoy hits added

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7565 6adb6e08-d915-0410-9...

8fcb8f4090632fdb99596661a9f140f8c0f81186 authored almost 14 years ago by David Wojnar <[email protected]>

fixed ifdef in isow_wave

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7564 6adb6e08-d915-0410-9...

95d9978dd250417f487592b5a71a64951bb4fa32 authored almost 14 years ago by Rene Hussong <[email protected]>

* fixed problem with consensus computation in labeled simulation introduced with last merge from Sim branch into head ([7546])

* fixed bug that prevented switching to MALDI ionization in MSSim

git-svn-id: https://open-ms.sv...

50745c1d0cb752fbcce3324019464ad14c1f4db1 authored almost 14 years ago by Stephan Aiche <[email protected]>

** fixed #214: invalid trafo computation in MapAlignment

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7562 6adb6e08-d915-0410-9...

e7a6efae8cb8a49432e75954a2b54603d5ff6793 authored almost 14 years ago by Chris Bielow <[email protected]>

Fixed several warnings/tests for isowave

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7561 6adb6e08-d915-0410-9...

6f91ca9080ca986bfa76a25227376455557884d3 authored almost 14 years ago by Rene Hussong <[email protected]>

* some more debug info in features for asymmetric elution profiles

* some changes in method signatures (more const'ness)
* improved initial guess for EGH Trace fi...

796334223c8f3ddf5e9e2f1f246ae1182277dcdf authored almost 14 years ago by Stephan Aiche <[email protected]>

fixed warning about missing base class c'tor

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7558 6adb6e08-d915...

bc899fdf95f407a465de40a093862c9ccbdd2113 authored almost 14 years ago by Stephan Aiche <[email protected]>

** fixed #211

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7557 6adb6e08-d915-0410-9...

01c7e85566d115195671acce5cb70884f130f91a authored almost 14 years ago by Chris Bielow <[email protected]>

Added common immonium ions to theoretical spectrum generator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7556 6adb6e08-d915-0410-9...

05783ad02c494cac1528593b8b8bb36a46975891 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

addendum to last commit

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7553 6adb6e08-d915-0410-9...

3727703e6291d5e78449e2b13b90e1055e8402c2 authored almost 14 years ago by Hendrik Weisser <[email protected]>

ProteinQuantifier: redefined 'top 0' in connection with 'consensus:fix_peptides', improved documentation, added tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7552 6adb6e08-d915-0410-9...

de7b8121045a43db005d4a42e7cbcb11efdad8df authored almost 14 years ago by Hendrik Weisser <[email protected]>

bugfix: option 'top = 0' now handled correctly (thanks to Chris for reporting)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7551 6adb6e08-d915-0410-9...

fbb8b4451d810de60058af21c94aac89f2f7f7a5 authored almost 14 years ago by Hendrik Weisser <[email protected]>

** fixed disclaimer in IsotopeWavelet classes

** fixed compile error in IsotopeWavelet classes
** fixed source groups in IsotopeWavelet classes...

5ff4f13db91a17cd24ced592b7d0e0eeedda7b12 authored almost 14 years ago by Chris Bielow <[email protected]>

factored out rest of spectrabrowser code

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7549 6adb6e08-d915-0410-9...

d1a8a37f5670792682b372471f279d96063914a8 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

** merged HashGrid

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7548 6adb6e08-d915-0410-9...

f24308d8e697dff46788bcb45ee7927f64b69779 authored almost 14 years ago by Chris Bielow <[email protected]>

factored out most of Spectra browser code as preparation for new views

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7547 6adb6e08-d915-0410-9...

82b4669915bb0a89a1e1bd3f79529441ead65ec6 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

** merged back Sim branch into HEAD

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7546 6adb6e08-d915-0410-9...

ad7d53ec54bdec9841c68275fe28f23b458ae91c authored almost 14 years ago by Chris Bielow <[email protected]>

** some cleaning up of HashGrid class (coding convention, constness etc - still not done)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7545 6adb6e08-d915...

aa643c45628c2fa469c4270dc4686fa9a4210c48 authored almost 14 years ago by Chris Bielow <[email protected]>

** use Peak1D instead of RichPeak1D saving ~40 of memory for simulation

** TODO: MS2 signals need to be revised

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot...

44d39175fbee0a7ffb0f9407df2fd10e834f990a authored almost 14 years ago by Chris Bielow <[email protected]>

removed preprocessor bug in FeatureFinderAlgorithmIsotopeWavelet.h

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7543 6adb6e08-d915-0410-9...

6beab4e8a5f14b4c2a3dc3b86116dcea1364ae89 authored almost 14 years ago by Rene Hussong <[email protected]>

** Sim fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7542 6adb6e08-d915...

25c82963119f692c7f46389f9f1632f0491729c1 authored almost 14 years ago by Chris Bielow <[email protected]>

added gap processing for high res data for isotope wavelet

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7541 6adb6e08-d915-0410-9...

4690a5f672704134775a571e1e0286b709fce4f2 authored almost 14 years ago by Rene Hussong <[email protected]>

** minor fixes (valgrind, TOPPAS output,...)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7540 6adb6e08-d915...

21a2064cd36db01d697d3785cbd29efada07a47d authored almost 14 years ago by Chris Bielow <[email protected]>

** contaminants fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7539 6adb6e08-d915...

0221ce358e87618af27b744e5acbfd3c06f86ce5 authored almost 14 years ago by Chris Bielow <[email protected]>

fixed line endings in cmake files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7538 6adb6e08-d915-0410-9...

8ed7fe6493360d98ea054fa05efc845324aa3d64 authored almost 14 years ago by Stephan Aiche <[email protected]>

some preparation for new spectra views

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7537 6adb6e08-d915-0410-9...

5c6b6f29746e27abee8d103868b820931b6056fc authored almost 14 years ago by Timo Sachsenberg <[email protected]>

** binary package docu updated

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7535 6adb6e08-d915-0410-9...

a730b3fb29b15b0119eb1af24f94acc4578be1cc authored almost 14 years ago by Chris Bielow <[email protected]>

** better help text when SHARE is not found

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7534 6adb6e08-d915-0410-9...

57e64978e5fb703dbf4c4646f73caff42bf9d2cf authored almost 14 years ago by Chris Bielow <[email protected]>

** small comment

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7533 6adb6e08-d915-0410-9...

612ad2069dcb8ff4fbcee1387e5bc0cde93f8411 authored almost 14 years ago by Chris Bielow <[email protected]>

** fixed ImageCreator tests.. '(broken for some reason - images look the same though)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7532 6adb6e08-d915-0410-9...

ed95916948996ff74cb0baf08c666be6ad74c724 authored almost 14 years ago by Chris Bielow <[email protected]>

preserve formatting of user mods

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7531 6adb6e08-d915-0410-9...

54b83c7b6265f3b6bf5dc6f1325447bd3f9eb4f6 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

advanced option to add an additional user modification subtree from an external file added

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7530 6adb6e08-d915-0410-...

c0276667eb6240273739fa071c294bdd57ffb8d2 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

set deb dependencies for openms with CPack

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7529 6adb6e08-d915-0410-9...

048fb0678b726b71e57f6ed73d14d662b34baa6f authored almost 14 years ago by Mathias Walzer <[email protected]>

second scetch of a tool descriptor xml schema file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7527 6adb6e08-d915-0410-9...

423fe39a469918964d6cebeb5e9cac4ae7099af0 authored almost 14 years ago by Mathias Walzer <[email protected]>

** updated release TODO's

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7526 6adb6e08-d915-0410-9...

bb5e4c848d502e315d303bf1a7bf77001ab0e063 authored almost 14 years ago by Chris Bielow <[email protected]>

fixed typo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7525 6adb6e08-d915-0410-9...

e6d99bed6a3d1ea142de1909abfe30e46efeb4cd authored almost 14 years ago by Timo Sachsenberg <[email protected]>

fixed small naming bug

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7524 6adb6e08-d915-0410-9...

8d1a730a56d5ac80f5512a9f7948c00c3ec61d23 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

added important new 2.1.9 omssa option (specification of precusor mass tolerance in ppm)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7523 6adb6e08-d915-0410-9...

5c078e58e8407ee1c5a74128c5f72cc4c8bd7068 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

** fixed small TOPPView bug

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7522 6adb6e08-d915-0410-9...

6438626afe6d5f4224a1ed5671903020a4e9d524 authored almost 14 years ago by Chris Bielow <[email protected]>

** more memory friendly RawSignalSimulation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7521 6adb6e08-d915...

78101204ba68433392a518d1667d5f4fa38aebc2 authored almost 14 years ago by Chris Bielow <[email protected]>

** better docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7520 6adb6e08-d915...

f318ad37939fb1e8d7b50bad1ae819b3555d3a93 authored almost 14 years ago by Chris Bielow <[email protected]>

** minor docu update

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7519 6adb6e08-d915-0410-9...

74cf290b7dadeb0d1c9078ca1633ae21f7171062 authored almost 14 years ago by Chris Bielow <[email protected]>

** better install instructions when running Cmake

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7518 6adb6e08-d915-0410-9...

8f37f33555795453bbccd164521a45f18d396c02 authored almost 14 years ago by Chris Bielow <[email protected]>

** removed excessive white noise

** introduced different resolution models (linear, constant, sqrt)

git-svn-id: https://open-ms.s...

67a494cf377e011a44cd1305d28a021d60b6d9d9 authored almost 14 years ago by Chris Bielow <[email protected]>

** fixed a segfault in RawSignalSimulation when mz_std_dev is set to 0

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7516 6adb6e08-d915...

d0da9dba27e9ee1ea7d32b8658e6a1c3a6718c56 authored almost 14 years ago by Chris Bielow <[email protected]>

added another way to query the ModificationsDB

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7514 6adb6e08-d915-0410-9...

276d4956cf43cd09cb0dfc724c30783bd4b68738 authored almost 14 years ago by Stephan Aiche <[email protected]>

** minor

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7513 6adb6e08-d915-0410-9...

162f0bbf00173372803d84f04fc87af20c655a25 authored almost 14 years ago by Chris Bielow <[email protected]>

** removed DemoDialog from TOPPView (meant as tutorial browser)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7512 6adb6e08-d915-0410-9...

49cad33d20b5f936456c2bada23cfa8b1a00881d authored almost 14 years ago by Chris Bielow <[email protected]>

Fixed compile issues for WinXP systems

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7511 6adb6e08-d915-0410-9...

25c4dc534ade2f21f70a1a59ec030ec0f4d527bf authored almost 14 years ago by Chris Bielow <[email protected]>

** get rid of extra console window for GUI apps (when started from a console directly the console output is still visible)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7510 6adb6e08-d915-0410-9...

4a75f6c54cfc53f76c92d4dcb51b1c56fdb94e9b authored almost 14 years ago by Chris Bielow <[email protected]>

** fixed small bug

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7509 6adb6e08-d915-0410-9...

141cbff10b7a785f675e35ba32a10e596c834752 authored almost 14 years ago by Chris Bielow <[email protected]>

** some FileFilter docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7508 6adb6e08-d915-0410-9...

b96a41fb889ef84138bb0f6f8cfaae8a778300e6 authored almost 14 years ago by Chris Bielow <[email protected]>

** TOPPView: fixed axis naming bug (partially)

** TOPPView: consensus elements now show their size

git-svn-id: https://open-ms.svn.sourceforge...

8df756d25934543bad2ec38f2631df0ba84316c2 authored almost 14 years ago by Chris Bielow <[email protected]>

created plugin directory

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7506 6adb6e08-d915-0410-9...

1096fdd5266e4ddb0effed188640057144d04322 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

removed some debugging output

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7505 6adb6e08-d915-0410-...

9a20f4b3ff531c90724caeeccc1ff6b2a8aa534d authored almost 14 years ago by Timo Sachsenberg <[email protected]>

fixed log scaling bug in 2D

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7504 6adb6e08-d915-0410-9...

2c7d7aeb335a0e0760b43abc4008e8ace9305b52 authored almost 14 years ago by Timo Sachsenberg <[email protected]>

initial log support in 1D

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7503 6adb6e08-d915-0410-9...

909460659d3de7c0c109634d886dc9d898a83b02 authored about 14 years ago by Timo Sachsenberg <[email protected]>

** fixed broken link in TOPPView

** fixed compile warning in TOPPViewBase

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot...

ea223ac179b28878492d0a30210f6b3df399b598 authored about 14 years ago by Chris Bielow <[email protected]>

coloring of required parameters

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7501 6adb6e08-d915-0410-9...

9acd72e8aa7e181802e8d8c96da14b70ec32ef12 authored about 14 years ago by Timo Sachsenberg <[email protected]>

added required tag to ini

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7500 6adb6e08-d915-0410-9...

30ca7474c1c1e4636818f09a8541a6609be0b245 authored about 14 years ago by Timo Sachsenberg <[email protected]>

** small fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7499 6adb6e08-d915-0410-9...

496d8e2cbd4a4bab3817b031418286ee19756325 authored about 14 years ago by Chris Bielow <[email protected]>

inital support for log scaling in 2D (still needs some gradient modifications and support in 3D/1D)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7498 6adb6e08-d915-0410-9...

5a81142aea1ccf38a25bc8b2d4036e7fd1b21504 authored about 14 years ago by Timo Sachsenberg <[email protected]>

more preparations for logarithmic gradients in 2D View

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7497 6adb6e08-d915-0410-9...

e3338847e2e80b7851b400c5757ca2ad41f5f489 authored about 14 years ago by Timo Sachsenberg <[email protected]>

** small fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7496 6adb6e08-d915-0410-9...

4bfb6b2267c9d025e56ef5680c195f1b6f9c8f57 authored about 14 years ago by Chris Bielow <[email protected]>

** some cleanup of cl shaping

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7495 6adb6e08-d915-0410-9...

69fecef2d78aa27f177ba13c347100c393459833 authored about 14 years ago by Chris Bielow <[email protected]>

** stty added to command shaping

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7494 6adb6e08-d915-0410-9...

a6c6af63e3608ddf96b5e4fead9986f6d7225368 authored about 14 years ago by Chris Bielow <[email protected]>

** test version of command line shaping (see #179)

(todo if this works: adapt TOPPDocumenter)

git-svn-id: https://open-ms.svn.sourceforge.net/svnro...

7bbdedb83be9b889356aaa6b8f69fd9a7ab7968c authored about 14 years ago by Chris Bielow <[email protected]>

** docu fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7492 6adb6e08-d915-0410-9...

1d02cbafb6230312f78505ec5aade95c0bacf9ed authored about 14 years ago by Chris Bielow <[email protected]>

** fixed some tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7491 6adb6e08-d915-0410-9...

98088e1b6c2de2501e782a5a0978b8bf4ce06422 authored about 14 years ago by Chris Bielow <[email protected]>

** fixed #206

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7490 6adb6e08-d915-0410-9...

7e8cd848f43f1d50c4b14de408ea3596cf341b06 authored about 14 years ago by Chris Bielow <[email protected]>

generalized gradients to more than 100 bins

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7489 6adb6e08-d915-0410-...

f983b92f77262f8734b1640698224999fddbc455 authored about 14 years ago by Timo Sachsenberg <[email protected]>

** fixed bug in OMSSAAdapter (when executable not found)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7488 6adb6e08-d915...

bd87f8245064aebb3a0888b41e901d228bad88a9 authored about 14 years ago by Chris Bielow <[email protected]>

fixed problem with non-OpenMP builds in simulator branch

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Sim2@7487 6adb6e08-d915...

53fd490d712225decc6f495937a1799992fdca77 authored about 14 years ago by Stephan Aiche <[email protected]>