github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

** made FASTAFile_test.C more robust

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8273 6adb6e08-d915-0410-9...

a31c15e74dfd6b177d1370aa25709f0e27cc19f9 authored over 13 years ago by Chris Bielow <[email protected]>

** fixed SpecArrayTest

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8272 6adb6e08-d915-0410-9...

c9b8c93246c0dd4b270058da69b7773d8ff4f64a authored over 13 years ago by Chris Bielow <[email protected]>

fixed some minor coding issues

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8270 6adb6e08-d915-0410-9...

79244902ae648abccb67d644572e33f82dd7e5e7 authored over 13 years ago by Stephan Aiche <[email protected]>

** fixed too long 'long' for MacOS

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8269 6adb6e08-d915-0410-9...

935cbb28c1b1e38732334958b9b81bb37c99dfad authored over 13 years ago by Chris Bielow <[email protected]>

** added more tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8268 6adb6e08-d915-0410-9...

6d464c0401146bf9715763a1cef293c4fe535e93 authored over 13 years ago by Chris Bielow <[email protected]>

** added test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8266 6adb6e08-d915-0410-9...

bc315a39cdf53d5af442e227f3732f965e32545b authored over 13 years ago by Chris Bielow <[email protected]>

** minor fix MsInspectFile

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8265 6adb6e08-d915-0410-9...

c5490f437a7ac2dcdfdc3270edcbbd19405f2062 authored over 13 years ago by Chris Bielow <[email protected]>

** added test, fixed small bug in MsInspectFile

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8264 6adb6e08-d915-0410-9...

36373320ee9453f8567b7f288454c3c7c23b93da authored over 13 years ago by Chris Bielow <[email protected]>

** created some more tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8263 6adb6e08-d915-0410-9...

f00ae4b1f1e46524d3f6926f36d14e8ad668b5fe authored over 13 years ago by Chris Bielow <[email protected]>

fixed some checker errors..

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8262 6adb6e08-d915-0410-9...

b258b843a498d24018b111feb515fb9e58fd1ea7 authored over 13 years ago by Chris Bielow <[email protected]>

** added ExecutePipeline test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8259 6adb6e08-d915-0410-9...

c50328dff2334eddf98218e559cdb0c2ea7dcc99 authored over 13 years ago by Chris Bielow <[email protected]>

** some more docu for IDFilter.C

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8256 6adb6e08-d915-0410-9...

0064dd9656ca9688aaaf0f65309fba2089eb8d63 authored over 13 years ago by Chris Bielow <[email protected]>

updated doxygen version check to not complain about versions > 1.7.2 since they work again correctly

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8249 6adb6e08-d915-0410-9...

940555881c19bc5073f0c5256ba7e45c86732300 authored over 13 years ago by Stephan Aiche <[email protected]>

fixed some gcc 4.6 warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8248 6adb6e08-d915-0410-9...

963a7b39a7029c64abbfb3b4167609d12ae12a0c authored over 13 years ago by Stephan Aiche <[email protected]>

** fixed iterator type error in VISUAL

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8247 6adb6e08-d915-0410-9...

76d7d9e4f2ab1c1c745f0415b7cfc3e96c0b80da authored over 13 years ago by Chris Bielow <[email protected]>

** added picked peak ground truth to simulator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8246 6adb6e08-d915-0410-9...

118faac2715e97a8522d02540f58b172524b210b authored over 13 years ago by Chris Bielow <[email protected]>

fixed overload ambiguity due to missing cast.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8245 6adb6e08-d915-0410-...

360597b52d87b0c43955eb3ba3e2f75f9ec41e7a authored over 13 years ago by Oliver Kohlbacher <[email protected]>

some 2D chromatogram support

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8242 6adb6e08-d915-0410-9...

40a9ac39096875e3abbd9d2ffdc618e94e285b84 authored over 13 years ago by Timo Sachsenberg <[email protected]>

some preparations for Chromatogram support

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8241 6adb6e08-d915-0410-...

d14ddabfba6320950cbb5da5eee704818afd7c0d authored over 13 years ago by Timo Sachsenberg <[email protected]>

fixed broken tests on itchy

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8240 6adb6e08-d915-0410-9...

718bd035a8bced4e3319ee9376799710c880a192 authored over 13 years ago by Chris Bielow <[email protected]>

** build system, minor

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8239 6adb6e08-d915-0410-9...

9b3d3e5ed098ae6d152dd9a542d5d1600db6ca97 authored over 13 years ago by Chris Bielow <[email protected]>

TOPPView 3D: Snap to max intensity as default

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8238 6adb6e08-d915-0410-9...

7587d0b7e98bcd6f7f64ca2cd1c47ce18eda4f9a authored over 13 years ago by Timo Sachsenberg <[email protected]>

Spectrum2DCanvas: improved peak drawing

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8237 6adb6e08-d915-0410-9...

a5841b72d7b15e0ee364b9aadc5c7d1b2d48a5cc authored over 13 years ago by Timo Sachsenberg <[email protected]>

TOPPView: deleting a layer causes zoom-out fixed

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8236 6adb6e08-d915-0410-9...

f29504b5230336b62e6419892a806e3891a9ab27 authored over 13 years ago by Timo Sachsenberg <[email protected]>

** fixed warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8235 6adb6e08-d915-0410-9...

e9260f0c922789861d83f79ea64d7117b63db716 authored over 13 years ago by Chris Bielow <[email protected]>

** fixed #300

** enabled TOPPAS node recyling
** some better error messages

git-svn-id: https://open-ms.svn.so...

29781bdd086c37ae67f81b756c52e7a959583566 authored over 13 years ago by Chris Bielow <[email protected]>

** fixed compile errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8233 6adb6e08-d915-0410-9...

3ae625abfa8f809ea8ad8c8d80b1958e935db5c7 authored over 13 years ago by Chris Bielow <[email protected]>

removed g++4.6 warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8232 6adb6e08-d915-0410-9...

43b470a1d0012a91ff735936ca864797a35cf642 authored over 13 years ago by Rene Hussong <[email protected]>

** major TOPPAS change

** fixed #205, #210, #234, #259
** most important changes:
- implicit "Merge All" for nodes acc...

b37bd8797963b11379ed27f5fad77abe689ce888 authored over 13 years ago by Chris Bielow <[email protected]>

** minor docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8230 6adb6e08-d915-0410-9...

2cff9301e49728e04e55fb6e4dc34347754ed31c authored over 13 years ago by Chris Bielow <[email protected]>

compressed TOPP and UTILS static code analysis tests into single tests TOPP_cppcheck_test, UTILS_cppcheck_test and added GUI_TOOLS_cppcheck_test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8229 6adb6e08-d915-0410-9...

fa4935f989167dd09a1880e91d28e8df4578a38e authored over 13 years ago by Stephan Aiche <[email protected]>

** merged CMake changes from 1.8 Branch

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8227 6adb6e08-d915-0410-9...

f5276837f422dcf6fec827769dcbfc8afc24dab2 authored over 13 years ago by Chris Bielow <[email protected]>

fixed some more gcc 4.6 warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8226 6adb6e08-d915-0410-9...

2fd406762345f9504462315b4db9340cd5fafc25 authored over 13 years ago by Stephan Aiche <[email protected]>

** fixed unexpected crash of MapAligner -pose_clustering when using empty feature maps as input

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8223 6adb6e08-d915-0410-9...

c7144cf827da03d6b54ed1ce0ab19c0779e7862f authored over 13 years ago by Chris Bielow <[email protected]>

enabled cppcheck static code analysis for OpenMS

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8222 6adb6e08-d915-0410-9...

1178dc6bc48052840e3245abe39961a48a5d30e2 authored over 13 years ago by Stephan Aiche <[email protected]>

fixed Possible null pointer dereference/redundant null check

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8221 6adb6e08-d915-0410-9...

f3bbb90d75d58f8f6d6606932e6fa3a45c78bf0b authored over 13 years ago by Stephan Aiche <[email protected]>

initial experiments with INTERNAL tools

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8218 6adb6e08-d915-0410-9...

1f6762df53b0cd2f3c64e2cdfbbceedcc35e349d authored over 13 years ago by Timo Sachsenberg <[email protected]>

some more gcc 4.6 fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8217 6adb6e08-d915-0410-9...

8b1b48d16009c9eca90772343de67ccf35edd90d authored over 13 years ago by Stephan Aiche <[email protected]>

moved AnnotationItems stuff into separate directory

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8216 6adb6e08-d915-0410-9...

bef20e702006073af329494d604f618e55983462 authored over 13 years ago by Timo Sachsenberg <[email protected]>

some more fixes for gcc 4.6 warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8215 6adb6e08-d915-0410-9...

baa30f65fe80ecb7642e8900e3d9b5c4bc72f2dd authored over 13 years ago by Stephan Aiche <[email protected]>

fixed some gcc 4.6 warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8213 6adb6e08-d915-0410-9...

0a2ced7aa4122c4e967a266d0064952fb77227bd authored over 13 years ago by Stephan Aiche <[email protected]>

** adapted test_create php to recent changes for gcc 4.6

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8211 6adb6e08-d915-0410-9...

ec0fe05d61a483ab437ce5bd78c1e823cd07e9bf authored over 13 years ago by Chris Bielow <[email protected]>

fixed int-to-pointer-cast warning of gcc 4.6

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8210 6adb6e08-d915-0410-9...

e5019b3a74f825509700bbf3f287826d057ce351 authored over 13 years ago by Stephan Aiche <[email protected]>

merged fix for broken Mac OS X package generation from Release1.8 into HEAD

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8208 6adb6e08-d915-0410-9...

26c836da9dc48945c02528dd0238fc7a5b002347 authored over 13 years ago by Stephan Aiche <[email protected]>

** minor docu fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8207 6adb6e08-d915-0410-9...

eabf116b5367cd7caf0f6b06727cd240fe27b175 authored over 13 years ago by Chris Bielow <[email protected]>

** fixed doc linkage and include paths

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8204 6adb6e08-d915-0410-9...

d1cc5de56684b497f1da221a4164b257cd9b863d authored over 13 years ago by Chris Bielow <[email protected]>

** fixed iTRAQ tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8203 6adb6e08-d915-0410-9...

c3a82701c7ead43c231ceb90b858b29e0c1413e8 authored over 13 years ago by Chris Bielow <[email protected]>

** some improvements for iTRAQ and tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8202 6adb6e08-d915-0410-9...

6e47e2bb80494ac7f74fdf0348a5173a5b85e6ff authored over 13 years ago by Chris Bielow <[email protected]>

** minor

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8201 6adb6e08-d915-0410-9...

3d3a8d0e6bb66c3ab52c3b86fe8b11d976ad1c1b authored over 13 years ago by Chris Bielow <[email protected]>

updated SILACAnalyzer: added singlet-search, little speed-up for computeActualMzShift, fixed bug in calculation of asw, updated TOPP tool test and class tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8200 6adb6e08-d915-0410-9...

202055f9d122f0177e705c22bdb0e6f5c6a0708a authored over 13 years ago by hp-23 <[email protected]>

added option annoate_file_origin to allow tracing of merge operations

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8198 6adb6e08-d915-0410-9...

495f8d94470b56851028222aa7265b9435c822b7 authored over 13 years ago by Timo Sachsenberg <[email protected]>

** eol style

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8197 6adb6e08-d915-0410-9...

4ea0283ed516d1365993d90a1c48729b45a1cd3b authored over 13 years ago by Chris Bielow <[email protected]>

** fixed #297

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8196 6adb6e08-d915-0410-9...

40face68371666622f70ea1edde915524c7b18ad authored over 13 years ago by Chris Bielow <[email protected]>

** fixed tutorial link issue

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8195 6adb6e08-d915-0410-9...

84442d9afb8d14f7a5d7a97efec19a4794aec57e authored over 13 years ago by Chris Bielow <[email protected]>

removed variable shadowing in CPU postprocesing

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8194 6adb6e08-d915-0410-9...

db523fec8c9b30526660b909a3786b82db24dea5 authored over 13 years ago by Rene Hussong <[email protected]>

** some doc

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8193 6adb6e08-d915-0410-9...

6667e944460612e74deba5708fd742d9a04a7bba authored over 13 years ago by Chris Bielow <[email protected]>

** fixed a warning

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8192 6adb6e08-d915-0410-9...

0f351867c0b2c34fbb1128ea991e911fa80f2dea authored over 13 years ago by Chris Bielow <[email protected]>

** some linux fixes for lib split

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8191 6adb6e08-d915-0410-9...

64fadf7ee3e7d6e519c2e744099d6af27f3c7ce6 authored over 13 years ago by Chris Bielow <[email protected]>

** SPLIT library into OpenMS and OPENMS_GUI

** some TOPP tool clean up
** new target: GUI (for all gui tools: TOPPView, TOPPAS, INIFileEditor...

c21fb241fdc9ffbc933f2ab8791ceb8d2e85d997 authored over 13 years ago by Chris Bielow <[email protected]>

** fixed #296

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8188 6adb6e08-d915-0410-9...

aa18c9d142e60f7cd9b6143aee0240f465ed7b8b authored over 13 years ago by Chris Bielow <[email protected]>

extended ConvexHull2D::compress test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8185 6adb6e08-d915-0410-9...

263a0ca2e4374ddff681e1423ba68fa4b97ed73d authored over 13 years ago by Stephan Aiche <[email protected]>

updated splashscreens (TOPPAS/TOPPView) to new HEAD version (1.9)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8184 6adb6e08-d915-0410-9...

f56b1469cb50e4cd276410a56a043258cfc924ce authored over 13 years ago by Stephan Aiche <[email protected]>

HEAD version is 1.9 now; splash screens still need to be updated

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8183 6adb6e08-d915-0410-9...

e09e4d15bc9fc3c30eda99188fad5c3b4552fdbd authored over 13 years ago by Stephan Aiche <[email protected]>

merged release 1.8 branch back to head

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@8182 6adb6e08-d915-0410-9...

112221ce92c18b8dc2b1cfbc0832b645ba0652b9 authored over 13 years ago by Stephan Aiche <[email protected]>

** fixed compile errors of SILACAnalyzer

** renamed BinaryTreeNode to SILACTreeNode
** moved internal BinaryTreeNode to BinaryTreeNode cla...

a88f43ac927a6a36096b200d72da4156368f9797 authored over 13 years ago by Chris Bielow <[email protected]>

fixed warnings, added TOPP test for empty mzML and mzML with negativ RT spectrum

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7965 6adb6e08-d915-0410-9...

68101c5685ea2e93cb662940c68ab953066964c3 authored over 13 years ago by hp-23 <[email protected]>

updated TOPP test for SILACAnalyzer

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7953 6adb6e08-d915-0410-9...

5f0efed3d77a1b2f7460d4848178e5a423161ef0 authored over 13 years ago by hp-23 <[email protected]>

erased type, erased SILAC type, set intensity_cutoff default to 10000, changed description for mass shifts in featureXML output

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7950 6adb6e08-d915-0410-9...

f9f556dd42818901387e874adf7d6ea88cf77831 authored over 13 years ago by hp-23 <[email protected]>

SILACAnalyzer docu updated.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7945 6adb6e08-d915-0410-9...

e0a622b611c7302166408cbc840eb8c9a3624ba0 authored over 13 years ago by Lars Nilse <[email protected]>

updated docu: correct parameter description in TOPP documentation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7940 6adb6e08-d915-0410-9...

3f76cf9378e1b958abe28f6db92b7a89b91df38d authored over 13 years ago by hp-23 <[email protected]>

changed parameter description for ini file, cosmetic changes for header documentation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7938 6adb6e08-d915-0410-9...

259f0681e4446a0aace0492b6fc5419231615a21 authored over 13 years ago by hp-23 <[email protected]>

updated SILACAnalyzer to version 2.0, including new TOPP test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7934 6adb6e08-d915-0410-9...

418424218be33836304ba182b3f96446f1851924 authored over 13 years ago by hp-23 <[email protected]>

** AScore fixed

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7903 6adb6e08-d915-0410-9...

df3e56e7b5d262621b69159a2fa1b037ded543ce authored over 13 years ago by Chris Bielow <[email protected]>

** minor log issue

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7902 6adb6e08-d915-0410-9...

69a267987f7e535723245a896f96ca0f5b8e6a90 authored over 13 years ago by Chris Bielow <[email protected]>

** fixed compile error under Win32

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7901 6adb6e08-d915-0410-9...

c52ecf782ac787c2bd404592e00a2467f73bedd5 authored over 13 years ago by Chris Bielow <[email protected]>

new test datafile and added the generator tool to the executables list

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7900 6adb6e08-d915-0410-...

f90370a15e0949ee86c562bd70a4e77d294d2dba authored over 13 years ago by Sandro Andreotti <[email protected]>

added the new classes SvmTheoreticalSpectrumGeneratorSet and SvmTheoreticalSpectrumGeneratorTrainer

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7899 6adb6e08-d915-0410-...

b75893df122389dc5d6b26c38dbb7405d5a3edc4 authored over 13 years ago by Sandro Andreotti <[email protected]>

changed to adapt to the changed SvmTheoreticalSpectrumGenerator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7898 6adb6e08-d915-0410-...

72db7b78bc16a68e5ca7167a3c027475306b42cf authored over 13 years ago by Sandro Andreotti <[email protected]>

changed type of isotope intensity metavalue to DoubleList

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7897 6adb6e08-d915-0410-...

d6adf490e279ca5df6566c9783821557224bcd7e authored over 13 years ago by Sandro Andreotti <[email protected]>

completes commit 7891

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7896 6adb6e08-d915-0410-...

5626dca05aa3e4b7bd33c440b8c41bc3e96a6e4c authored over 13 years ago by Sandro Andreotti <[email protected]>

added new tool + class for lib

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7895 6adb6e08-d915-0410-...

7997a9172574ddb77094c64894aff6a81b9c66c7 authored over 13 years ago by Sandro Andreotti <[email protected]>

test added

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7894 6adb6e08-d915-0410-...

30fff1c06ce8067dd3601242fc40d48c4e4cfe22 authored over 13 years ago by Sandro Andreotti <[email protected]>

added new class

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7893 6adb6e08-d915-0410-...

9a564d5f08b2921631f69f9c3fe6db1d361dd16e authored over 13 years ago by Sandro Andreotti <[email protected]>

several changes in the spectrum generation process

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7892 6adb6e08-d915-0410-...

bf1a637157a0aed30f292eb5185ee26c18a70a35 authored over 13 years ago by Sandro Andreotti <[email protected]>

changed the precursor selection for non-feature based selection

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7891 6adb6e08-d915-0410-...

8f1a0cec002be66c98dc827fcf90fcb1cc1bcfaa authored over 13 years ago by Sandro Andreotti <[email protected]>

modified: now the getSpectrum method generates peaks for all selected types. User does not have to call addPeaks anymore

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7890 6adb6e08-d915-0410-...

5776e11fdc6901fa02fa2c6ce6c9a0779fadefa8 authored over 13 years ago by Sandro Andreotti <[email protected]>

added MS/MS simulation test files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7889 6adb6e08-d915-0410-...

d450b64acd5f7c31d2b48adb6c34dbd6586e8242 authored over 13 years ago by Sandro Andreotti <[email protected]>

** added missing omp header

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7887 6adb6e08-d915-0410-9...

499ac1e45578a5d26024ac3d33c2a391389637e9 authored over 13 years ago by Chris Bielow <[email protected]>

** fixed some tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7886 6adb6e08-d915-0410-9...

c8c44ab864836e03a513fc4a229e962dec08f3df authored over 13 years ago by Chris Bielow <[email protected]>

** fixed wrong ini file versions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7885 6adb6e08-d915-0410-9...

396f85afdc478417c9937ae8ab5a0ac0873cb1e6 authored over 13 years ago by Chris Bielow <[email protected]>

** disabled meta value output of FF (debug level > 10 only)

** progress of FF only reported for master thread (avoid warnings if invalid progress value)

git...

d65ff6190778b05b7aec16af427d8dd14a9e49dc authored over 13 years ago by Chris Bielow <[email protected]>

AScore implementation for phospho site localization

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7883 6adb6e08-d915-0410-9...

5a1e35cf2ec40a4b347e9b073cdc60da8c6953ed authored over 13 years ago by David Wojnar <[email protected]>

** speed up and bugfix of grid alignment for sim data

** value checks for ionization sim

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-...

13184d284b212ed1ed12847c95f4e62df77485c0 authored over 13 years ago by Chris Bielow <[email protected]>

** small step towards writing bz2, gz files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7879 6adb6e08-d915-0410-9...

8cddf6c22276a5ceba507ee4806e4533ea134063 authored over 13 years ago by Chris Bielow <[email protected]>

** fixed small typo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7877 6adb6e08-d915-0410-9...

aa1176abb5b8c57a468cd5a6861f0942489833f5 authored over 13 years ago by Chris Bielow <[email protected]>

another fix for the 1D signal compression (see also changesets [7867],[7871])

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7876 6adb6e08-d915-0410-9...

8b8b9b228361241c99a30ee6505f591ebb3d2708 authored over 13 years ago by Stephan Aiche <[email protected]>

** improved 2D projection (much faster and better when zoomed)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7875 6adb6e08-d915-0410-9...

f0584ecc6219d0fb59ae56e108665c2495b4a1c5 authored over 13 years ago by Chris Bielow <[email protected]>

another fix for the 1D signal compression (see also changeset [7867])

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7871 6adb6e08-d915-0410-9...

04a30449846dbae524daebb9bd81822c300ae3ba authored over 13 years ago by Stephan Aiche <[email protected]>

fixed schema for compability

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7868 6adb6e08-d915-0410-9...

df8b076dd1da187f3182321ca9da709c28114566 authored over 13 years ago by Mathias Walzer <[email protected]>

fixed 1D signal compression bug in RawMSSignalSimulation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@7867 6adb6e08-d915-0410-9...

1a75df989ee0fd188f34bbbe392411f1b0a786d2 authored over 13 years ago by Stephan Aiche <[email protected]>