github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

attempt to fix the TOPPAS description font problems

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9519 6adb6e0...

771bb5767686d0a167fe43a46262a0634aa2b3f6 authored over 12 years ago by Stephan Aiche <[email protected]>

small addition

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9518 6adb6e0...

b5d7acff38b36e0fcb3a82266fc4599de1743c63 authored over 12 years ago by Hendrik Weisser <[email protected]>

added extra dependency for ubuntu 11.04

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9517 6adb6...

9711912641c21726474ed27e003179ed1e9a4326 authored over 12 years ago by Johannes Veit <[email protected]>

changed rpm deps again, is now compatible with fedora and openSUSE

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9516 6adb6...

de698b8452d80334a9dda8d8b8f15497d7f2f8c7 authored over 12 years ago by Johannes Veit <[email protected]>

Added post-install script running ldconfig

after user installs RPM package.

(otherwise, OpenMS*.so are not found on clean
Fedora installati...

b9d050bf9ff72f4836855f33b8db4c948b9f1e6b authored over 12 years ago by Johannes Veit <[email protected]>

fixed dependency names of RPM package

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9514 6adb6...

0670a9d8518ea8cebd9f3e1cb276341342f5cc3e authored over 12 years ago by Johannes Veit <[email protected]>

fixed filenames in BSA quantitation TOPPAS example again

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9513 6adb6...

a8e8784360e766567af64f1693db24b27c118f03 authored over 12 years ago by Johannes Veit <[email protected]>

updated with recent changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9512 6adb6e0...

426fa7b794028f47b85852019e18963b8a1d4dac authored over 12 years ago by Hendrik Weisser <[email protected]>

Hopefully fixed problems with cmake < 2.8.5 under linux. Except for the contrib libs (linked statically), shared libs are preferred now. Before that, CMake < 2.8.5 seemed to also link against static system libs which were not compiled with -fPIC, causing the linking of OpenMS.so to fail.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9511 6adb6...

c0d72dadd2c9a2ae789efee9acf453ad4115c4b8 authored over 12 years ago by Johannes Veit <[email protected]>

new m/z and RT calculation [m/z = intensity-average over mono-isotopic mass trace, RT = intensity-average over entire peptide i.e. all isotopes]

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9510 6adb6e0...

258156eed80f9f02ca69f68f1f6210876bf69468 authored over 12 years ago by Lars Nilse <[email protected]>

==== Fixed linux packaging ====

* contrib/libsvm:
* build .so _and_ .a also under linux
* split up Makefile patch into OS...

854b1588e8f26dabd79a67247dbb51508ee4375c authored over 12 years ago by Johannes Veit <[email protected]>

** fixed test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9505 6adb6e0...

9d3e381eb6922775ee2321981735350d702ccd07 authored over 12 years ago by Chris Bielow <[email protected]>

** fix of input restrictions for MapStatistics

** minor fix of constants for iTRAQ

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open...

38724e72fb9c3247eed219efe710b5216d36cc04 authored over 12 years ago by Chris Bielow <[email protected]>

// sorted test file of MassTraceDetection, as test failed due to unsorted data on Win32

*this needs checking in the tool though!!!

git-svn-id: https://open-ms.svn.sourceforge.net/svnr...

873f285c6b130627c8300e7071d7d230aad3e14c authored over 12 years ago by Chris Bielow <[email protected]>

FeatureFinderMetabo, MassTraceExtractor, and corresponding classes: revisioned documentation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9501 6adb6e0...

4d1bceef585e2a9f014a71704f9479b0aafcc22b authored almost 13 years ago by Erhan Kenar <[email protected]>

fixed Size/UInt conversion issue

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9500 6adb6e0...

12371b26b4ba7f87c430d628a1dff27d90b8fda5 authored almost 13 years ago by Hendrik Weisser <[email protected]>

made 'search_id' attribute ('search_summary' element) optional, cleaned up 'optionalAttributeAs...' usage

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9499 6adb6e0...

f5146d533aab1ed80a4301e8ebdb35f827f01214 authored almost 13 years ago by Hendrik Weisser <[email protected]>

improved error handling

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9498 6adb6e0...

273a373491d99eadebc884bbbe073387671d5c0b authored almost 13 years ago by Hendrik Weisser <[email protected]>

** fixed r9496

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9497 6adb6e0...

14c156ab2b132f2962b7c5a2fdbe17f648c1e3c6 authored almost 13 years ago by Chris Bielow <[email protected]>

fixed docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9496 6adb6e...

ddf17f52c3bba6eced898bed851c6b5c17e2fa54 authored almost 13 years ago by Timo Sachsenberg <[email protected]>

* Mascot docu improved

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9495 6adb6e0...

9b272e00d34ab5a9f7b3fe7da2f68983dbcfdb25 authored almost 13 years ago by Chris Bielow <[email protected]>

marked MzTabExporter as experimental

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9494 6adb6e0...

72a4528c34425dbb888b1a0a8cf2c6b8b25b2cd9 authored almost 13 years ago by Timo Sachsenberg <[email protected]>

FeatureFindingMetabo test fix (compare FeatureMaps previously sorted by MZ)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9493 6adb6e0...

6957e408d956cac19bb14930a495d2205881b8ab authored almost 13 years ago by Erhan Kenar <[email protected]>

** fixed warnings introduced in [9480] and [9470]

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9492 6adb6e0...

25a6b05e2839bc80c84051f53c3208beb52f2c3a authored almost 13 years ago by Chris Bielow <[email protected]>

** minor typos

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9491 6adb6e0...

c79f20de6e878b88c7b94bd24f7333aad8423dc3 authored almost 13 years ago by Chris Bielow <[email protected]>

FeatureFinderMetabo_1 test input/output files fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9490 6adb6e0...

d7b350523473ffd36150e23facf4b6b8e13181b1 authored almost 13 years ago by Erhan Kenar <[email protected]>

ElutionPeakDetection_test fixed

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9489 6adb6e0...

48eafeab7aef84918a299fe30986adeda709dff6 authored almost 13 years ago by Erhan Kenar <[email protected]>

TOPP_MassTraceExtractor_1_out should work now as expected

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9488 6adb6e0...

e39a2632f584296beeff8868955764084d4485d5 authored almost 13 years ago by Erhan Kenar <[email protected]>

ElutionPeakDetection_1_input.mzML added as testing data set

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9487 6adb6e0...

5a378c4afe1fe31583cacb43c45bacee2b58a22e authored almost 13 years ago by Erhan Kenar <[email protected]>

MassTraceExtractor tests changed

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9486 6adb6e0...

303dd888b78fd3c2518afc12128988e6e500211c authored almost 13 years ago by Erhan Kenar <[email protected]>

added name to list of developers

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9485 6adb6...

0f35ed9cddbf7311a9dad8df2a8c0d1373e43c23 authored almost 13 years ago by Johannes Veit <[email protected]>

SILACAnalyzer and FeatureFinderRaw tests fixed

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9484 6adb6e0...

a4c840bc8bbcbc44147b8266fea2268546330f5f authored almost 13 years ago by Lars Nilse <[email protected]>

** fixed CHANGELOG

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9483 6adb6e0...

14cfae57d79e4e9e9b864c5ddb87204248277e69 authored almost 13 years ago by Chris Bielow <[email protected]>

MassTraceDetection tests and input file added

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9482 6adb6e0...

d470a55ec92a81af4bd75827223186e0d23a1f43 authored almost 13 years ago by Erhan Kenar <[email protected]>

fixed ticket 379 ('MapAlignerPoseClustering: -reference:index has no effect'), added test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9481 6adb6e0...

6f68cc163d2fa93761dda64a00864ed9120c9ac4 authored almost 13 years ago by Hendrik Weisser <[email protected]>

some bug fixes migrated from SILACAnalyzer branch

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9480 6adb6e0...

21177e1e8b2eb62acb85c6315d4bb1ab0d862e83 authored almost 13 years ago by Timo Sachsenberg <[email protected]>

disabled cppcheck for files causing internal errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9479 6adb6e0...

ebb8edcc7a212094093a215763d11b385bb50106 authored almost 13 years ago by Stephan Aiche <[email protected]>

fixed/extended tests (warnings from checker script); fixed bug in checker.php (complaining about missing 'Id' svn keyword although it is properly set); added LowessSmoothing_test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9477 6adb6e0...

1d58050baf0f4213b065934d9076b01a5d9ebc40 authored almost 13 years ago by Erhan Kenar <[email protected]>

Added MassTrace tests; MassTraceDetection fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9474 6adb6e0...

6750ce596db1991ac24aac7b1c2d1e8ffc34b3b0 authored almost 13 years ago by Erhan Kenar <[email protected]>

added warnings for parameter corrections

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9473 6adb6e0...

85b46c1b55909cd20b5cedf341d21f2570e2ae00 authored almost 13 years ago by Hendrik Weisser <[email protected]>

warn instead of fail for bad parameter, use 'median' from StatisticFunctions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9472 6adb6e0...

69c703e64b1f0b44c1f6684485752e0516060568 authored almost 13 years ago by Hendrik Weisser <[email protected]>

MassTrace test, fixed MassTraceExtractor tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9471 6adb6e0...

164c81141df5f723fc22fe18e9fb01ac7cbeb51c authored almost 13 years ago by Erhan Kenar <[email protected]>

fixed cppcheck warnings in VISUAL

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9470 6adb6e0...

7dd608b184421200182a8a672cc55b4917cab000 authored almost 13 years ago by Stephan Aiche <[email protected]>

some more cppcheck warnings/errors fixed

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9469 6adb6e0...

9556fb26cf0c119ae1455f07cdfc88bf91aeeb1e authored almost 13 years ago by Stephan Aiche <[email protected]>

fixed lots of cppcheck 1.52 warnings/errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9468 6adb6e0...

5c773bfd9ab60e54d0b66d87ac7dcbe6cbaed21b authored almost 13 years ago by Stephan Aiche <[email protected]>

Read/Write CVTerms of Transitions

- according to the standard (http://www.peptideatlas.org/schemas/TraML/1.0.0/TraML1.0.0.html#Tra...

5848753bb39997adc63559ad8c0fd290cf481350 authored almost 13 years ago by Hannes Roest <[email protected]>

create alias for get/set RT to fix interaction with all current tools

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@9466 6adb6e08-d915-0410-9...

c26693d08dc7a5427d498242a9612f6ae26f5b81 authored almost 13 years ago by Hannes Roest <[email protected]>

also convert SRM mzXML files with more than one peak per spectra

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@9465 6adb6e08-d915-0410-9...

a0e20f7cc35030ec95c6537dd83591904983fc35 authored almost 13 years ago by Hannes Roest <[email protected]>

added test case to median calculation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9464 6adb6e0...

df913cc26e12e1ca89dd862943a78b4f3ef4dbd9 authored almost 13 years ago by Timo Sachsenberg <[email protected]>

fixed UTILS cppcheck warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9463 6adb6e0...

ecb6332a1deaa55a7147e6c8a32bde60bbbbbea6 authored almost 13 years ago by Stephan Aiche <[email protected]>

corrected median calculation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9462 6adb6e...

8da94851075f413570d33b594ef7d46a3d42be12 authored almost 13 years ago by Timo Sachsenberg <[email protected]>

mass trace detection on a sub area

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9461 6adb6e...

96a60158453bf2e0cfe8c5664c242342f854d540 authored almost 13 years ago by Timo Sachsenberg <[email protected]>

** fixed CPP check warnings for GUI executables

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9460 6adb6e0...

36136fdfe59d5d175370fe3352f6e839658b66e9 authored almost 13 years ago by Chris Bielow <[email protected]>

MassTraceExtractor & FeaFiMetabo refactorings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9459 6adb6e0...

c7ce9e9e156a198ec041cbbe546df90e4f245fb7 authored almost 13 years ago by Erhan Kenar <[email protected]>

* Added description text to BSA_Quantitation.toppas

* New screenshot of the re-layouted merger_example.toppas in TOPPAS tutorial

git-svn-id: https...

84c9c0a6b962e9753a9d23f1e3884287075628c7 authored almost 13 years ago by Johannes Veit <[email protected]>

Added a few lines + screenshot on parallelization support to TOPPAS tutorial.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9457 6adb6...

14b194b092e24ae401e0d1503ae518001005ac64 authored almost 13 years ago by Johannes Veit <[email protected]>

HashGrid: Use std::numeric_limits

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9456 6adb6e...

6cef6d9b893df679ab1163b5cb85a28bc29172ab authored almost 13 years ago by Bastian Blank <[email protected]>

minor fixes for the mac os x dmg package fix script

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9455 6adb6e0...

9a8f05fbcb57790dc3a06bbceb0c7077526faedb authored almost 13 years ago by Stephan Aiche <[email protected]>

HashGrid: Use larger type for cell index

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9454 6adb6e...

a035c7ca005e2d610f909560f539863a84ec922b authored almost 13 years ago by Bastian Blank <[email protected]>

MassTraceExtractor build fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9453 6adb6e0...

68a69e01b4981d5d9b1d106d9ac63861b30afc84 authored almost 13 years ago by Erhan Kenar <[email protected]>

** fixed warning in HierarchicalClustering.h

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9452 6adb6e0...

e2c679e460d54bacfa4df2f6f939e68e07f250a6 authored almost 13 years ago by Chris Bielow <[email protected]>

** minor modifications to TOPPAS example tutorials (e.g. made merger tutorial use less space on canvas)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9451 6adb6e0...

6883d2f2a30a386d855fd313380b895893fb8348 authored almost 13 years ago by Chris Bielow <[email protected]>

Re-added TOPPAS menu to screenshots (but removed tray icons + name this time)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9450 6adb6...

eb0dcc73b4e895863bc9737d77cde0c8541e8daa authored almost 13 years ago by Johannes Veit <[email protected]>

* Unlocked existing parallelization support in TOPPAS and ExecutePipeline

* Fixed warning in TOPPASVertex.C

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open...

64eec9c4f3550a3d4bc8a64a46592559f6af50f5 authored almost 13 years ago by Johannes Veit <[email protected]>

FeaFiMetabo refactorings & fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9448 6adb6e0...

dfe81fc65770072f4cea0111d1f20c36ae1759fb authored almost 13 years ago by Erhan Kenar <[email protected]>

Minor FeaFiMetabo updates

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9447 6adb6e0...

c81c11129db7d580124eaab96c253e794fd94bca authored almost 13 years ago by Erhan Kenar <[email protected]>

** reverted [9439] and replaced with fix with no side effects

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9441 6adb6e0...

101789c6ee9623fef6366e7b0fda8245556f4275 authored almost 13 years ago by Chris Bielow <[email protected]>

** removed name from TOPPAS screenshots

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9440 6adb6e0...

bb01133d644cf3480d3571164dacb93980ced5dd authored almost 13 years ago by Chris Bielow <[email protected]>

Fixed resolution of relative input file names in TOPPAS workflows.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9439 6adb6...

5cf3422ded56f08efd3659cd5b82fad4be9f3245 authored almost 13 years ago by Johannes Veit <[email protected]>

toppas docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9438 6adb6...

7eb7a773f33585a6ecbd70842ee323c14d0c9761 authored almost 13 years ago by Johannes Veit <[email protected]>

Updated remaining images in TOPPAS tutorial

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9437 6adb6...

222d258ec50ec8be7a9a99f4d80c5b92f82f7266 authored almost 13 years ago by Johannes Veit <[email protected]>

- Disabled breakpoint feature in TOPPAS workflows (not mature enough yet)

- Updated all example workflows
- Replaced BSA ID by E.coli ID example
- Updated TOPPAS tutorial ...

ab63dd73b460614cc7e77537e32e9fe6b55d365c authored almost 13 years ago by Johannes Veit <[email protected]>

added new ID example to toppas examples.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9435 6adb6...

72afefe0c72834a72356a21bd7fcf08108e7c1b9 authored almost 13 years ago by Johannes Veit <[email protected]>

reverted [9424] since it didnt resovlved the clang warning

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9434 6adb6e0...

186ec530652996fdfb733e9128d38ad9ffeff3a6 authored almost 13 years ago by Stephan Aiche <[email protected]>

added script to finalize the Mac OS X dmg

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9433 6adb6e0...

2cfae9c42911ce2620da28e9b8561a4271415eff authored almost 13 years ago by Stephan Aiche <[email protected]>

fixed small memory leak in FFCentroided

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9432 6adb6e0...

b9140df636e06aaa2debda1272883618ee6eee24 authored almost 13 years ago by Stephan Aiche <[email protected]>

Added data for E. coli identification example.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9430 6adb6e...

72b1f7b7db06de1e9e3c0ac593e0b34bc2a5f874 authored almost 13 years ago by Oliver Kohlbacher <[email protected]>

updated to 1.9

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9429 6adb6e...

fb8da3842b0d43cfc7f9a5a61b37d1e7a414e559 authored almost 13 years ago by Oliver Kohlbacher <[email protected]>

removed "beta" from toppas splashscreen

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9428 6adb6...

e2e3a00ef17de64ae92186465a7bc5d63b51a612 authored almost 13 years ago by Johannes Veit <[email protected]>

added another fixed bug to the CHANGELOG

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9426 6adb6e0...

d2ce42ccccd7cedbbbb5ab7280b810897fb6d22d authored almost 13 years ago by Stephan Aiche <[email protected]>

reordered package creation process for os x dmgs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9425 6adb6e0...

321a4126f813bb1ae61dd6ab93dbe08183e96271 authored almost 13 years ago by Stephan Aiche <[email protected]>

attempt to fix some clang warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9424 6adb6e0...

aad2512d2f699ae27988f76cf88307ff2eaa2f94 authored almost 13 years ago by Stephan Aiche <[email protected]>

fixed some major issues in the current mac os x build/packaging system

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9423 6adb6e0...

c08ad1c9cade942dd54d6c721c90dbc78a6046fd authored almost 13 years ago by Stephan Aiche <[email protected]>

* deactivated cpp check for clang compiler to avoid configure warnings

* fixed some minor docu stuff

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/b...

5f01bc9d62221f4a3964e35d6b5030839db686d4 authored almost 13 years ago by Stephan Aiche <[email protected]>

fix attempt for #280

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9421 6adb6e0...

df31a9e57fe051a3a51c9dc789dd302405504016 authored almost 13 years ago by Stephan Aiche <[email protected]>

** fixed TOPP documentation errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9418 6adb6e0...

498b2cbc415afad043f101de7248f8b35ee70165 authored almost 13 years ago by Chris Bielow <[email protected]>

HashGrid: Check for under- and overflow in index calculation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9414 6adb6e...

d70d5009651ef35ef54365595c00122eed8d3564 authored almost 13 years ago by Bastian Blank <[email protected]>

** fixed warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9412 6adb6e0...

6a9db7602a824826873a0a4e30a16cef2ea8564f authored almost 13 years ago by Chris Bielow <[email protected]>

** fixed two warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9411 6adb6e0...

155d0d9e88be100ff65314c7977639964611d17a authored almost 13 years ago by Chris Bielow <[email protected]>

** fixed more doxygen errors

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9409 6adb6e0...

b16a219b4a5d5e25951557ccedb310c19638f458 authored almost 13 years ago by Chris Bielow <[email protected]>

** completed changelog

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9408 6adb6e0...

55558997b088a31470548a8123006662a4330166 authored almost 13 years ago by Chris Bielow <[email protected]>

** fixed lots of doxygen warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9407 6adb6e0...

4386d7a0b3799b7799011be8786dfe33ae15cbe8 authored almost 13 years ago by Chris Bielow <[email protected]>

** updated package list a little

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9406 6adb6e0...

40f2b465d038a5ebc4ab1175b577e4b884b48a0c authored almost 13 years ago by Chris Bielow <[email protected]>

** removed unknown file types from TOPP I/O restrictions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9405 6adb6e0...

52926630fe92fa44c6f0ba99beace9dcbcb8327b authored almost 13 years ago by Chris Bielow <[email protected]>

...

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9404 6adb6e0...

27184fcf9ab957765f63619484cf5f0ba64fad0f authored almost 13 years ago by Chris Bielow <[email protected]>

** fixed bug introduced today

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9403 6adb6e0...

c5be555fb7c6e2aa500b754671315ec3d8b91bfe authored almost 13 years ago by Chris Bielow <[email protected]>

...

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9402 6adb6e0...

8345fd3a5e3c64deead4bdf701d71bb506f9215b authored almost 13 years ago by Chris Bielow <[email protected]>

updated images that contained a type field

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9401 6adb6e0...

a9161cd30f79551f07fa46af135d84dff33d5b21 authored almost 13 years ago by Stephan Aiche <[email protected]>

** fixed TOPPView issue, when using TOPPAS: temp path not a subdirectory

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9400 6adb6e0...

a634780d5b42a85e62adb16c982ff7ce1ad5fba7 authored almost 13 years ago by Chris Bielow <[email protected]>

** added output file type restrictions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.9@9399 6adb6e...

e0f59f0b887fed83d88f5fe4735df0f82044ebe4 authored almost 13 years ago by Chris Bielow <[email protected]>