github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

[FIX] OpenSWATH : Code cleanup, add comments, remove warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10146 6adb6e08-d915-0410-...

543ad195db702c1327bbcf0e6907271c0469df20 authored about 12 years ago by Hannes Roest <[email protected]>

[FEATURE] OpenSWATH : MRMDecoyGenerator included (with tests)

Author: George Rosenberger <[email protected]>

git-svn-id: https://open-ms.svn.s...

d7c1fe064cac5fdbf8f6def3dbdc5fd42ae54b18 authored about 12 years ago by Hannes Roest <[email protected]>

[FEATURE] OpenSWATH: add MRM Kernel classes (MRMFeature and MRMTransitionGroup)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10144 6adb6e08-d915-0410-...

e484cd4033c353aee7a4747f5b237e0bc1b12372 authored about 12 years ago by Hannes Roest <[email protected]>

[DOC] removed from class docu (like all other TOPP tools)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10143 6adb6e08-d915-0410-...

29329efd132f2d5de3d7e216c8827f88619fa7bb authored about 12 years ago by Hendrik Weisser <[email protected]>

Script optimized

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10142 6adb6e08-d915-0410-...

0d12437ece01c8747d37deb523c78a72e63475e2 authored about 12 years ago by Sven Nahnsen <[email protected]>

[NOP] added mzQCML schema (with updates) and changed QCExporter accordingly

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10139 6adb6e08-d915-0410-...

acb49b6def3ab215f3d2fbf9f2adabfa6afbbc31 authored about 12 years ago by Mathias Walzer <[email protected]>

[INTERNAL] fixed compile error introduced in [10133] (OpenMP 2.5 requires SignedSize)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10136 6adb6e08-d915-0410-...

1d8bf8fdc24076b09ecf6810e0668e985269521f authored about 12 years ago by Chris Bielow <[email protected]>

[FIX] Added missing support of MassTraceExtractor/FeatureFinderMetabo in TOPPView's tool dialog

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10135 6adb6e08-d915-0410-...

5636697d5c7c59ab330c2fd94468d1644c27d314 authored about 12 years ago by Erhan Kenar <[email protected]>

[TEST] Added missing CTest for FeatureFinderMetabo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10134 6adb6e08-d915-0410-...

2a48c34f21beb48f1ee50a7df7f45a412d3b11d4 authored about 12 years ago by Erhan Kenar <[email protected]>

removed compiler warnings (Xcode 4.5, OSX)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10133 6adb6e08-d915-0410...

3ccbfd317cc4918b7011860422bc3697ae552b79 authored about 12 years ago by Oliver Kohlbacher <[email protected]>

[INTERNAL] fixed compile warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10132 6adb6e08-d915-0410-...

6204056bcf69f178b4811a74a0709e2370350bf9 authored about 12 years ago by Chris Bielow <[email protected]>

[TEST] Fixed all tests related to MassTraceExtractor and FeatureFinderMetabo (for real)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10131 6adb6e08-d915-0410-...

334464dae62abbcec3255b006e5179ef611f9bee authored about 12 years ago by Erhan Kenar <[email protected]>

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10130 6adb6e08-d915-0410-941f-83917bcadc18

d9c9e74d39982983b03df9243f315165b67d1f93 authored about 12 years ago by Oliver Kohlbacher <[email protected]>

[NOP] style fixes. It's so much fun.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10129 6adb6e08-d915-0410...

e66152667bf3dbb313f89a2604943d0b65ef481e authored about 12 years ago by Timo Sachsenberg <[email protected]>

[FIX] fixed compile warning

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10128 6adb6e08-d915-0410-...

334eecc955814574d6589911eb966ac607e19362 authored about 12 years ago by Timo Sachsenberg <[email protected]>

[FEATURE-#463] filter for alphanumeric, pass String by reference

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10127 6adb6e08-d915-0410-...

b1dc782c7820023229900612d125ec87bdabd5f0 authored about 12 years ago by Hannes Roest <[email protected]>

[FEATURE-#463] only write the file basename instead of full path

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10126 6adb6e08-d915-0410-...

cd4dede900d0a002f58a4fd514d8db4f514d7c11 authored about 12 years ago by Hannes Roest <[email protected]>

[FEATURE-#463] filename in MGF title

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10125 6adb6e08-d915-0410-...

4709a78651e3fbc878525e95570ade6d4848ca02 authored about 12 years ago by Hannes Roest <[email protected]>

[FIX] wrong test for missing meta data never allows fast spectrum sorting

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10124 6adb6e08-d915-0410-...

2c37b92e29232c32e901ad14973bb9f68f7e01d5 authored about 12 years ago by Timo Sachsenberg <[email protected]>

[FIX, FEATURE] manually disable SVN version integration (dependencies are currently broken [cause is known, but unclear WHY] when its active, since VersionInfo.C is always rebuild)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10123 6adb6e08-d915-0410-...

420ccd5df8b7cdbcc4eed531c9db29a195331474 authored about 12 years ago by Chris Bielow <[email protected]>

[FIX] introduced in 10115

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10122 6adb6e08-d915-0410-...

a1c42cb8553e490c926add23d978a8aad9bd824c authored about 12 years ago by Chris Bielow <[email protected]>

[FIX] avoid flickering window when calling IDEvaluation with an output file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10121 6adb6e08-d915-0410-...

e6ae8554b6821edd5223aa740ae808eb48c50cd8 authored about 12 years ago by Chris Bielow <[email protected]>

[DOC] internal FAQ fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10120 6adb6e08-d915-0410-...

f02e2d133d4eeae3b01a81733c9b416d41c17516 authored about 12 years ago by Chris Bielow <[email protected]>

[FIX] * fixed bug in PepNovoOutfile (terminal modifications not recognized)

* empty scans were added as empty PeptideIdentification (not anymore now)

git-svn-id: https://o...

3015c3faa0f2dac8157eeda9482b321d2cfcf112 authored about 12 years ago by Chris Bielow <[email protected]>

[FIX] small bug introduced in last commit

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10118 6adb6e08-d915-0410-...

cd39a52e63fec4401e7d2bfd1f299df7326114ad authored about 12 years ago by Timo Sachsenberg <[email protected]>

[NOP] Style corrections (Tab, Scopes, etc.)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10117 6adb6e08-d915-0410-...

2fdfdcbae946dce4a17eb778ecb28ac76f0bcfd7 authored about 12 years ago by Erhan Kenar <[email protected]>

[NOP] style correction

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10116 6adb6e08-d915-0410-...

ba4f1df3c76516898d8221cd61c213d3d3a4504f authored about 12 years ago by Timo Sachsenberg <[email protected]>

[FIX] overhaul of PepNovoAdapter, some more debug messages

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10115 6adb6e08-d915-0410-...

ebd4be185a11cf76a761d484c5319fab1b79a074 authored about 12 years ago by Chris Bielow <[email protected]>

[DOC] OMSSAAdapter docu improved

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10114 6adb6e08-d915-0410-...

e0e3687afba3d9df8d20434662a5f0c061804630 authored about 12 years ago by Chris Bielow <[email protected]>

[NOP] MzMLHandler manual style fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10113 6adb6e08-d915-0410-...

64e18784872faf76f05de4752560f25652f8c872 authored about 12 years ago by Timo Sachsenberg <[email protected]>

[NOP] style fixes of HANDLER subdir

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10112 6adb6e08-d915-0410-...

b10ab533ac2ebf0db09bfd2b6f672918f5940dc5 authored about 12 years ago by Timo Sachsenberg <[email protected]>

[FEATURE] Specify feature color in ImageCreator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10111 6adb6e08-d915-0410...

93f607d58c6713753ccacdd3adab7cd8eeae02a5 authored about 12 years ago by Timo Sachsenberg <[email protected]>

[NOP] /FORMAT folder style corrections

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10110 6adb6e08-d915-0410-...

9464f3abb915101fa783bfbedef9c0d672ccb79f authored about 12 years ago by Timo Sachsenberg <[email protected]>

[NOP] uncrustification and some manual checking of uncritical /FORMAT/ subdirs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10109 6adb6e08-d915-0410-...

7af83c614f09d73baf928538dd94bcb5d8f22c86 authored about 12 years ago by Timo Sachsenberg <[email protected]>

[INTERNAL] fix to last commit

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10108 6adb6e08-d915-0410-...

f66668e2da43a09d94c100704d1cded63a3c20f5 authored about 12 years ago by Chris Bielow <[email protected]>

[INTERNAL] fix for IDEvaluation (after file formats have been turned to lower case)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10107 6adb6e08-d915-0410-...

8d40717f436bcc6ec2b3c8bda4494002199186a5 authored about 12 years ago by Chris Bielow <[email protected]>

[DOC] minor change for EICExtractor.C

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10106 6adb6e08-d915-0410-...

4e2231b101bdd794516aee27cdcef2130f732368 authored about 12 years ago by Chris Bielow <[email protected]>

[NOP] automatic uncrustifycation (no _test and no /FORMAT)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10105 6adb6e08-d915-0410-...

2a9caa86b76bf9c194a9281b3eb168a5ace073c8 authored about 12 years ago by Timo Sachsenberg <[email protected]>

[FIX] ImageCreator test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10104 6adb6e08-d915-0410-...

88fc30f5233f47e300b10fa8103adf0f789511b9 authored about 12 years ago by Timo Sachsenberg <[email protected]>

[Fix] fixed INIUpdater tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10103 6adb6e08-d915-0410...

46925682b886a87fc11c0fbcb1ac87bfaf880237 authored about 12 years ago by Johannes Veit <[email protected]>

[FIX] fixed tests under linux

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10102 6adb6e08-d915-0410...

32d5cb040e286e59f2491d57879a26fff5703cbf authored about 12 years ago by Johannes Veit <[email protected]>

[NOP] minor addition

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10101 6adb6e08-d915-0410...

4c57790bb5185d8e9d54e79225d074bfb9838b9d authored about 12 years ago by Johannes Veit <[email protected]>

[FIX] fixed bug in FileFilter.C

* docs did not build under linux, FileFilter -write_ini was not working
* FileFilter.C contained...

34b06eb0ec3ea2b0753002dbf00dd283af33625a authored about 12 years ago by Johannes Veit <[email protected]>

[INTERNAL] * reverted FASTAFile to non-seqan version (which is currently broken)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10099 6adb6e08-d915-0410-...

a3eb8cbe3ec0adbf4544ae5ba973723b9e057cda authored about 12 years ago by Chris Bielow <[email protected]>

[NOP] last (hopefully) licence changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10098 6adb6e08-d915-0410-...

6377cdf94f087db9c863b25dad5cb5da6f6e6157 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn: final fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10097 6adb6e08-d915-0410-...

d0c94aa24d80f405c1f133c5fdea4c048f7059e4 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Hannes Roest: [FIX] SuperHirn: Add unique IDs to output featureXML

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10096 6adb6e08-d915-0410-...

df0dbd96ce732083a72072f7ee0f92ce10787dd1 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Hannes Roest: [TEST] add test with profile data for centroiding part of SuperHirn

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10095 6adb6e08-d915-0410-...

340a8fb256308868ddfd8b5629b3555385ada43a authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Hannes Roest: [NOP] forgotten changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10094 6adb6e08-d915-0410-...

92f676bd346c1417ea18344b51e119a03edd58fc authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Hannes Roest: [NOP] licence changes for tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10093 6adb6e08-d915-0410-...

17cc6539068cf58a03753a2b60839499402b4e75 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Hannes Roest: [NOP] licence changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10092 6adb6e08-d915-0410-...

0802917299fbe6baf10ea377eb63163ac5d42d12 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Hannes Roest: fix memory leaks, use boost::shared_ptr for raw data

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10091 6adb6e08-d915-0410-...

f5509272b038c812dc8c1942d33570a07d90d952 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Hannes Roest: clean up TOPPTool

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10090 6adb6e08-d915-0410-...

001107c8883be436796e919ec0bb14941b2b3569 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Hannes Roest: create tests for all classes, remove unused code

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10089 6adb6e08-d915-0410-...

7152b96b81953724d28dab2ea90a00c8ae2b2b68 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Hannes Roest: rebase & merge SuperHirnBranch, create TOPPTool and TOPPTest

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10088 6adb6e08-d915-0410-...

8618def8c7abee7f4a12bb76870fd58eb5362abd authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Peter Kunszt: refactoring and renaming of classes, variables according to openMS conventions, introduction of SuperHirnParameters for static constants that can be configured, introduction of SuperHirnUtils for some copy-pasted math funcitons, removing a few redundant classes or those that are not used

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10087 6adb6e08-d915-0410-...

72b5009a2f7d9d3655b6c253446104a2c927d812 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Disabled convex hull according to markus advice

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10086 6adb6e08-d915-0410-...

c2a1c2aba2e0c843f566c86a7b2e5268323ed551 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Adjusted log messages, removed commented code

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10085 6adb6e08-d915-0410-...

a25a7eebdae76c82a150b4c37f16f9c94ebbd458 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Removed dead code, fixed implicit conversions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10084 6adb6e08-d915-0410-...

4b016533a85151367d05dade5e76f786bc3789ab authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Removed dead code

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10083 6adb6e08-d915-0410-...

7ec49d4f536c12c01d762b664b3ec209eceb1dec authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Corrected background inntenisity test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10082 6adb6e08-d915-0410-...

ff18f257204561733c5e61ccead6b59e866c304f authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Explicit casts in simple_math2 (size_t to int)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10081 6adb6e08-d915-0410-...

8d36f5bcbd32eb33eb037718d099f5a08f9ee707 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Explicit casts in MS1_feature_merger and FT_PeakDetectControler (size_t to int)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10080 6adb6e08-d915-0410-...

36adc03f7147a81fd434c3dcfa524a871f1e6e7c authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Explicit casts in LC_MS (size_t to int)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10079 6adb6e08-d915-0410-...

4126a7920d4607965a10db6f76d5fe21099962aa authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Added overall superhirn test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10078 6adb6e08-d915-0410-...

8be4bae5721447116ce9e434e4f3a72ce06a065f authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Turned some implicit conversions into explicit convertions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10077 6adb6e08-d915-0410-...

fc99d6670bcd2be9f9458923747d88672083bb92 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Using correct types in simple_math2

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10076 6adb6e08-d915-0410-...

8d0928e396aee7d75e3630485312dea9c819cd11 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Merged windows changes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10075 6adb6e08-d915-0410-...

5e5cb1dd7add08c3a026e5e20ba96c4ba74ae4b5 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Removed copy constructor of MS2_feature

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10074 6adb6e08-d915-0410-...

3ee60fed70bc268edd5813af300cdc0f27ad8760 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Remove copy constructor of ClusteredMS2ConsensusSpectrum

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10073 6adb6e08-d915-0410-...

8e90045655c8fc2feb5fb10a3334786046c7f75f authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Added exlicit casts indicated by warnings on windows

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10072 6adb6e08-d915-0410-...

a795959b32b21cf10786444cee5ae0cf72b4276a authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Fixed conversion double->float problem (compiler warning was right)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10071 6adb6e08-d915-0410-...

3a7f80d59b70ab75e0ae2306484921725e373120 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Fixed conversion double->float problem (compiler warning was right)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10070 6adb6e08-d915-0410-...

8fbdca45178cdfc8b0eb385333882559a743346f authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Eliminated int->double conversion warning

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10069 6adb6e08-d915-0410-...

8739af97474e812a6d36982afdefbd55415dc89f authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Loop format corrected

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10068 6adb6e08-d915-0410-...

1cbfb7c0df75f9bb09f3d5263f8cffea2296ae3f authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Added LGPL headers to the implementation files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10067 6adb6e08-d915-0410-...

f2a928e346894b7c18580188c76569fba3be1590 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Inserted LGPL headers in the header files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10066 6adb6e08-d915-0410-...

6bce3d7684012cba41789bb9cb4b24edaf1ab655 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Removed commented code

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10065 6adb6e08-d915-0410-...

497c25e21eac313d9431441ebc3adb57a6db7296 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Commented why the orderByNativeIds feature is turned off

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10064 6adb6e08-d915-0410-...

1aea602e166653556112fabf6ae09243d39bccd8 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Removed unwanted params folder

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10063 6adb6e08-d915-0410-...

7b98106ef31794385815a34c8ad4392297e4ce59 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Removed obsolete backup files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10062 6adb6e08-d915-0410-...

4ed8efa9360e491396f707e8534c019b1b72cfa0 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Removed unused methods

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10061 6adb6e08-d915-0410-...

431a6a2dbe8a2cb585286d708c8de568bbba4f13 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Fixed some warnings caused by simple things

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10060 6adb6e08-d915-0410-...

7cadd3f8f658676254c06fbfcafcc084dc677c98 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Removed duplicate OPENMS_DLLAPI

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10059 6adb6e08-d915-0410-...

565df604488ddeecc15a757c39811544930c760c authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Changed forward declarations to includes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10058 6adb6e08-d915-0410-...

0e58d83ff7d1cc925030690161c8f60fb7cb1389 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Can reproduce build error on local windows. Added possibly missing OPENMS_DLLAPI declarations.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10057 6adb6e08-d915-0410-...

af3e5e734c9a47a58d485be465a6a56d84fdd2a0 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Moved superhirn classes to OpenMS namespace

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10056 6adb6e08-d915-0410-...

f79adc85c5bbcad467de0985ba258efc3118591b authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Superhirhn-All: Removed using namespace std from headers

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10055 6adb6e08-d915-0410-...

94e7f14755d5aeff4277629a792280213d943e2b authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Test for CentroidData

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10054 6adb6e08-d915-0410-...

ddd3202ebfca0513f5fe0ec4b5c6e80d0a18b63f authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Applied markus' fix for IsotopicDist, checked in backup of the old version and a diff as well

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10053 6adb6e08-d915-0410-...

843dbecdc5365e02e3c65887bf3acbb3064aeac3 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Started cleaning CentroidData

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10052 6adb6e08-d915-0410-...

0dbf317d403b5d48e6175d2de359f48e1c5de2df authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Re-enabled debug tweaks, cleaned BackgroundIntensityBin

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10051 6adb6e08-d915-0410-...

923f779606d992d5d8b10689bb7e91394bb7b4f4 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Removed another obsolete method from BackgroundControl. Difficult to test its side effects :(

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10050 6adb6e08-d915-0410-...

cf32ede565e4533017c9271960eedca577464fbd authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Cleaned up BackgroundControl

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10049 6adb6e08-d915-0410-...

e18fa2d71a9df99bd94173f85763d61b910e22b1 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Commented debug writing in order to run correctly on brutus

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10048 6adb6e08-d915-0410-...

f2feda3d8bccf7b29cb1c6cdbe1e255742d98e1b authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Cleaning Superhirn: Commented obsolete code in BackgroundControl

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10047 6adb6e08-d915-0410-...

a94626f255c85f714ec245cbc7a178adc43cb548 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Turned off the experimental feature order-by-native-id (crash report by paul neulinger)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10046 6adb6e08-d915-0410-...

3c3ad704f7ebab8f47d1dc54b784397679eaa2da authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Writing debug output to current dir instead of /tmp - windows compatibility

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10045 6adb6e08-d915-0410-...

92b8e42d665e01fa5617a305f651dd2b3a31065a authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: PROBABLY fixed superhirn issues on windows. Re-check on Mac/Linux!

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10044 6adb6e08-d915-0410-...

b48514c64c853bea202e38842e385c42fdcd0323 authored about 12 years ago by Hannes Roest <[email protected]>

Superhirn PATCH by Florian Zeller: Created test stubs for all superhirn classes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@10043 6adb6e08-d915-0410-...

74fc410ca16a29d28145847722874d8bd0d37279 authored about 12 years ago by Hannes Roest <[email protected]>