github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

[FIX] potential fix for linux segfaults

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10486 6adb6...

61bc7fc2e60732e7553837a52ba00ba22f60858a authored almost 12 years ago by Chris Bielow <[email protected]>

[FIX] for fix of fix (since it wasnt working on linux)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10485 6adb6...

40dddd5635046ff6619b67908ecf1695bf75b57f authored almost 12 years ago by Chris Bielow <[email protected]>

[FIX] for last commit --- default header was missing

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10484 6adb6...

e8ae501c95f5936b01f28002874f7c7eaf182240 authored almost 12 years ago by Chris Bielow <[email protected]>

[FIX] fixed build system error when configuring a fresh build directory with ENABLE_SVN=OFF

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10483 6adb6...

879e014faf4540bd0fe837c193f5022975170425 authored almost 12 years ago by Chris Bielow <[email protected]>

[FIX] fixed segmentation fault on linux

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10482 6adb6...

d232aa9204b7de4cef064887a6106420e1075bf5 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX] fixed inconsistent spelling of tool name that broke TOPPDocumenter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10481 6adb6...

62cca81b3816b197f8b2f76c5206a8f2f6fcd879 authored almost 12 years ago by Hendrik Weisser <[email protected]>

[DOC] included link to OpenSwathConfidenceScoring tool

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10480 6adb6...

c32c885ce690bc79997bca608a054a7977a8db45 authored almost 12 years ago by Hendrik Weisser <[email protected]>

[NOP] moved TOPP tool implementation to the correct directory

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10479 6adb6...

0e8536e272df9f1907f3024c430c865b2ea7e449 authored almost 12 years ago by Hendrik Weisser <[email protected]>

[FIX] strange TOPPView SegmentationFault

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10478 6adb6...

8f7a0e899ab30c59fa099a4871c80f725dc4a13c authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[DOC] add OpenSwath Tools to TOPP documentation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10477 6adb6...

8b771a9c5c2bde67e87d26691eb2dee7b25b795a authored almost 12 years ago by Hannes Roest <[email protected]>

[NOP] forgot some files

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10476 6adb6...

b491686367842cbdadfb7b442033b02b8474484a authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FEATURE, FIX]

* when processing for TOPPAS finishes, the icon in taskbar/dock will indicate this now
* resumi...

7e3ead593b8e08a8de643f6e56faacfc1bcc5400 authored almost 12 years ago by Chris Bielow <[email protected]>

[FIX-#494] high-intense peaks are occluded by low intense ones

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10474 6adb6...

6c09e072f4f0447f1d1b0aeb81b7574ef2f6130a authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[NOP] fixed checker/cpplint warnings in QApplicationTOPP. Moved cmake stuff to new sources.cmake in MISC folder

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10473 6adb6...

5014073e0a5f1a4cb8dd230978e0d99cdcf6c694 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#496] show feature annotation while hovering

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10472 6adb6...

e115973ce092c7e6d8b769def8081666486f6b05 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

Incorrect arrow keys binding if MZ is Y axis

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10471 6adb6...

680521ac81fc9a50c1a4370b8fef311f4acccc73 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#395] showing TOPP tools description in GUI

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10470 6adb6...

09a8a90d5f1f2ce5fedcb1a51272bea09e7d5e29 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#492] color coded features

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10469 6adb6...

eef3dd7a620f9211b86c7405d548269ba26ddaa0 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[DOC] fixed hypenation issues (its LC-MS, not LC/MS)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10468 6adb6...

562c91c4ee2be3b836e982f24a340e6a03ce4029 authored almost 12 years ago by Chris Bielow <[email protected]>

[NOP] minor code rearrangement and typo fix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10467 6adb6...

d8446492469a58a08ce0e9111e131bb75dd56197 authored almost 12 years ago by Chris Bielow <[email protected]>

[FEATURE, FIX-#493] implemented QApplication::notify(), which catches any fatal exceptions and continues to run the event loop. There might be cases where the program remains in a weird state, but at least the user gets a chance to save his data.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10466 6adb6...

7b30da8b7ad470270b7708dee79d0273eaf8407e authored almost 12 years ago by Chris Bielow <[email protected]>

[NOP] code formatting/flow

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10465 6adb6...

39afbc7f3114bc4fb9eeea7d55bdba8b657072a7 authored almost 12 years ago by Chris Bielow <[email protected]>

[INTERNAL] removed some debug output from ConsensusID and avoid empty hits

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10464 6adb6...

51408d89d742fb22e99a72dc6c1632e6bdeb4c0a authored almost 12 years ago by Chris Bielow <[email protected]>

[FIX] IDEvaluation now returns an error code instead of 0 if one of its input files does not contain Target/Decoy information

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10463 6adb6...

3560e356a00261156b51dd973df09eee982c4771 authored almost 12 years ago by Chris Bielow <[email protected]>

[FEATURE] Writing CTD files is now also supported for non-official tools (crashed before)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10462 6adb6...

ae0fb5c6283fa0573d098fbf43e5c145b49781ff authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX] addendum to [10460]; adapted WSDL test file to changes from [10460]

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10461 6adb6...

f3cdc135158023d67436ff0bf3b8c80193466316 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#473] removed nan as value for required double options. Removed the option to register required double options.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10460 6adb6...

ad4f36c71ae647edbbbe75ec96384cca2b66145a authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX] fixed FFSH tests after tool rename

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10459 6adb6...

e550b2323d1cb7bcda92694e428d91bb286f4136 authored almost 12 years ago by Stephan Aiche <[email protected]>

[NOP] forgot check in of MzTab.h

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10458 6adb...

647d2c44b09bf0feadfc1a20547f5ba1a3a12f4b authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FEATURE] nearly finalized MzTab data model

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10457 6adb6...

317a1071218f1dcc76de9a14e35bf44352341353 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#473] fixed TSVtoTraML test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10456 6adb6...

9701163945853d71c0c1a1a140da20030dafb110 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#473] registered out types

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10455 6adb6...

5beab7b47ec7cb355daa318b6e769246615df7c0 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#473] fixed most of the CTD related issues in the OpenSwath tools and removed unused cli options (in_type)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10454 6adb6...

d83d02f043eea21a2235952ff0c5a035a3977af5 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#473] fixed ToolHandler entry of OpenSwathDIAPreScoring

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10453 6adb6...

4823860c1679393b752d09a119528609e12a90c2 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#473] updated featureXML of SuperHirn

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10452 6adb6...

bf84bb803c917fab0b279a6a558605e1e4237c5f authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#473] updated ini file for SuperHirn]

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10451 6adb...

72ff038ed5b8f1b76b16c3224351506318e20a2d authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#467] integrated search engines if available into the mac package

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10450 6adb6...

541ab0127d2162f513211c21f3a4b2544076740f authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#489] default value of xtandem_executable is now chosen correctly on osx

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10449 6adb6...

212d6b01e6989987a695909d10f09b5c711c2f91 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX, INTERNAL] typo in parameter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10448 6adb6...

278bb02e8f47f03ba491b584f594272aa0270078 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#286] remove ' (3D)' suffix from caption when switching back to 2D

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10447 6adb6...

950b9a869e549846de4161831bfd7545ad126f75 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#473] added some missing tools to ToolHandler

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10446 6adb6...

10e793629fa6ccae39234306d8cd974bcb27b8ce authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#473] consistent tool naming

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10445 6adb6...

b6206918bf89ea0c9404c1ef3bd41defd1023d55 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#488] attempt to fix by ensuring correct encoding of converted c- and std-strings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10444 6adb6...

84e56c9347c1d2b538748644172f0130a135804a authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX] fixed checker/cpplint violations

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10443 6adb6...

d75f8b28f8565bdca364fc45b1bf7dca1649b6de authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#473] added missing valid format to RNPxlXICFilter.out

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10442 6adb6...

1e6e073d84b76a21da3296811f220a88d0d2aa6d authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#473] fixed IDFileConverter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10441 6adb6...

44e3e88a2c0556163004f3b7fe30f6ed4a2acd48 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX] TOPPAS parameter dialog did not remember changes when load or store buttons were used

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10440 6adb...

1f31419cf0ed0083e1e6a329fd5760dea81f4032 authored almost 12 years ago by Johannes Veit <[email protected]>

[FIX-#473] renabled fasta for OMSSAAdapter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10439 6adb...

9b3932c26e9fd7bd43a500de02eb58fc34eb868b authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FEATURE] PeptideIndexer is now multithreaded for the Aho-Corasick part (linear speed with up to 4 threads.. decays rapidly afterwards)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10438 6adb6...

37d9a7f4b88ee7cc16692d9be2a1816345d84638 authored almost 12 years ago by Chris Bielow <[email protected]>

[FEATURE] slight improvement of GUI behavior for the new parameter transfer feature in TOPPAS

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10437 6adb...

f522d2bbb7489a96118e707ec795c66a02829eaf authored almost 12 years ago by Johannes Veit <[email protected]>

[FIX-#351] all labelers now use valid map ids when creating consensus features

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10436 6adb6...

934127e402a523e089dc54dee9343e49af952a7a authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#473] fixed MassCalculator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10435 6adb...

83e709f2b7fc87540453e895a5315a94baa6fac5 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#473] fixed OMSSAAdapter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10434 6adb...

e4cee80a67855ef91fa7c8dec3b13d341664b342 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#473] added psq to file types

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10433 6adb...

a9cf077de0772958de464e07b519856f4ae0090b authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#473] fixed PrecursorIonSelector and InclusionExclusionListCreator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10432 6adb...

c0849c61423695463c7c56cad5b0cd56caaf8534 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#473] fixed ctd output of RNPxlXICFilter

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10431 6adb...

132c98a49f1e4fc7e4aa6086ba12a1ef2496da45 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX-#487]

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10430 6adb...

8dcee374e7e3f05f71e8d4903d28ea83ac4ec83e authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX] fixed compilation error (Linux, GCC 4.5.2, Qt 4.7.2)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10429 6adb6...

8aa05fc7a0c44cf20403121fa12b98128959e04c authored almost 12 years ago by Hendrik Weisser <[email protected]>

updated MzQuantMLHandler to schema changes, more to come.

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10428 6adb6...

7e994c5856e26bf3ff808fcad3b4aa0e56ce422f authored almost 12 years ago by Mathias Walzer <[email protected]>

[FEATURE] amendment to r10424 (color of edge will indicate copying now)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10427 6adb6...

d9dc339b46bcfa588e53306fda91a746fef83c45 authored almost 12 years ago by Chris Bielow <[email protected]>

[FIX-#470] fixed missing RT bug in MascotAdapterOnline

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10426 6adb...

ea5f176da2c60d20b2f14ad84f2d50e9e05b7025 authored almost 12 years ago by Johannes Veit <[email protected]>

[DOC] adapted TOPPAS docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10425 6adb6...

7af0eb876b8a8db2a2d30076fef9f7d432c7867a authored almost 12 years ago by Chris Bielow <[email protected]>

[FEATURE] TOPPAS now supports dragging of node parameters to another node (use Ctrl + the usual edge drawing). Great for copying param for search-engines and alike. Use with caution :)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10424 6adb6...

4b19aaec4676532f618429ab95ebe397d5971328 authored almost 12 years ago by Chris Bielow <[email protected]>

[API] changed signature of Param::update() to allow for a more silent update of Parameters

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10423 6adb6...

3ded5edb909f1e3ffb11df7ff0a611f8756b8eeb authored almost 12 years ago by Chris Bielow <[email protected]>

[INTERNAL] removed compiler warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10422 6adb6...

c9cb347fa18ded71b03978187020286c03913cbf authored almost 12 years ago by Chris Bielow <[email protected]>

fixed checker warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10421 6adb6...

d2e670e7fe35e8cb25dc24b0b7c629cdcbd8e2a0 authored almost 12 years ago by Sandro Andreotti <[email protected]>

[NOP] added RNPxl utils to ToolHandler

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10420 6adb6...

3e4c60b953498dbeb7cf1351539d676d1747649d authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[DOC] fixed typos in error message, formatting

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10419 6adb6...

a30defce0226934630b047b89d272957a95f3788 authored almost 12 years ago by Chris Bielow <[email protected]>

[BUILD,FIX-#485] removed FindBoost, FindOpenMP from cmake folder

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10418 6adb6...

05902d7ab8de89ab750860afa0a7c3d1c6867c37 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#452] Allow required attribute softwareRef to be missing (for ProteoWizard)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10417 6adb6...

b41abd568bb3a18b768066e46590732a9994976d authored almost 12 years ago by Hannes Roest <[email protected]>

[INTERNAL] Typo, ammend rev10415

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10416 6adb6...

f5665fed9e5932128e797cf004d43a3caae5ea52 authored almost 12 years ago by Hannes Roest <[email protected]>

[INTERNAL] move basic OpenSWATH toolchain to TOPP tools

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10415 6adb6...

6802cbf0f9fc8dc5738dce53e711b6b93c88e5aa authored almost 12 years ago by Hannes Roest <[email protected]>

[NOP] updated mass of cystein adduct in unimod

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10414 6adb6...

d8768a8ca31e101ae33788896f293ebc39839094 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[NOP] changed 152 modification in RNPxl

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10413 6adb...

bb260ad01aa111eb47d9902179fe15bbc6d42ccb authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX, #482] fixed operators and parser to handle elements with count 0

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10412 6adb...

45f80c3be6df29d4c9464c976471aafd41a65d95 authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[NOP] removed obsolete scripts for mac-osx package creation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10411 6adb6...

4955b2376af14a446fe1e8849a6f151844e1b2de authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#436] integrated new dependency checking script into the drag'n'drop generator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10410 6adb6...

90f04f4cfca67ae5c64fd621edf6e9cd2d2014d8 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX] fixed some more compile warnings in Fitter tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10409 6adb6...

8614d15cdc02e6a496e5273ecc4f8c276e77f834 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#436] added script to automatically fix dependencies of the OpenMS binaries

* the script searches for referenced, non-system libraries and frameworks and copies them to th...

4c58c1643f3e4cbfce47fbae7d8f8dc618575e06 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX] bugfix for ChromatogramExtractor using multiple threads

- it was possible that the output experiment was cleared after it
already contained data

git-...

9263e5b3467694817f32c2115ee41012aa6d5cc0 authored almost 12 years ago by Hannes Roest <[email protected]>

[FIX] fix TraML writer (order for CV / user param terms did not correspond to xsd order)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10406 6adb6...

939018dc5bc8e551a855ec4f851a2809a76e5ba9 authored almost 12 years ago by Hannes Roest <[email protected]>

[FIX,NOP] fixed numerous clang/gcc-4.8 warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10405 6adb6...

7d5108450680a14d7d4497e7b83b5e4eb2f68aea authored almost 12 years ago by Stephan Aiche <[email protected]>

maintainer list updated

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10404 6adb6...

14fe8dcd9cfccb7e8478a7e42521f0325a7754f0 authored almost 12 years ago by Lars Nilse <[email protected]>

* fix from r9963 merged into release branch (merge is actually broken - no proper branching)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10403 6adb6...

bb1be9e5d3d7e92b6b1466fc89611c305b139909 authored almost 12 years ago by Chris Bielow <[email protected]>

[FIX] fixed some more gcc/clang warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10402 6adb6...

c238264e55c47a08acfb3ca1ec0b988e1d447754 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX-#480] wrong order of iterator-end fixed

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10401 6adb6...

e5a087d2aa66798b67adbf2d8d89773527dd9762 authored almost 12 years ago by Chris Bielow <[email protected]>

[FIX-#473] fixed some CTD problems and added FuzzyDiff to black list

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10400 6adb6...

a97acc5ffffd77af7e9d5d61fad52b2c863c7636 authored almost 12 years ago by Stephan Aiche <[email protected]>

[TEST,FIX] added missing tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10399 6adb6...

4fbed1b1d27748e3ea2d061c61c8616e0c2619e1 authored almost 12 years ago by Alexandra Zerck <[email protected]>

[NOP] removed inactive maintainers if another maintainer is available / created missing IDDecoyprobability_test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10398 6adb6...

41aa1faad8c046eab6fd18304e3112e6b0e96a45 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX,NOP] fixed some clang compile warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10397 6adb6...

5c0fbc5b95fb3400cb73f4dda241def8e7753747 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX] fixed failing SVMWrapper_test and compile error in Matrix_test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10396 6adb6...

8b6805f206ae87801f0ae1ef581e8b3c8150cbd5 authored almost 12 years ago by Stephan Aiche <[email protected]>

[DOC] updated internal FAQ to contain some action points for the release manager

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10395 6adb6...

a2f8cda4886a6ba58dd8018866ecfd3f8351962c authored almost 12 years ago by Timo Sachsenberg <[email protected]>

[FIX] fixed possible seg-fault in ParamXMLHandler if restrictions attribute is given but empty

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10393 6adb6...

878b19e0274f0edd1b78aa112cb93ea3669626d3 authored almost 12 years ago by Stephan Aiche <[email protected]>

[NOP] reformated checker code upon request of cbielow

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10392 6adb6...

0882687fa287f040166089efd537b54c6f4fb911 authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX] fixed minor bug in checker introduced in [10390] (referenced wrong directory/file when searching for ACTIVE_MAINTAINERS file)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10391 6adb6...

93a412c3bfd4405221d39e3992d415b0947e2d51 authored almost 12 years ago by Stephan Aiche <[email protected]>

[NOP] checker now reports inactive maintainers based on tools/ACTIVE_MAINTAINERS file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10390 6adb6...

d970fd434f932095799f87b08b0364e741089a6b authored almost 12 years ago by Stephan Aiche <[email protected]>

[FIX,NOP] fixed checker/cppcheck warnings; updated maintainer in ClassTest.C (see [10388])

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10389 6adb6...

23eaf448886f6305808c5b4c94deb110bc4df488 authored almost 12 years ago by Stephan Aiche <[email protected]>

[NOP] updated maintainer of ClassTest

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10388 6adb6...

8ac51b4209513c4b29996410aad4f7a1eb85613d authored almost 12 years ago by Stephan Aiche <[email protected]>

[NOP] fixed header guards for checker script

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10387 6adb...

5b23bc1d0e9aa3e8d4c39ee837b6e9f090a4f6f5 authored almost 12 years ago by Johannes Veit <[email protected]>

[FIX] fixed lots of warnings in tests (unused parameters, set but not used, pointer cast)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.10@10386 6adb6...

d6d5deab24f94f0b6b7d1265448b79cfc629443f authored almost 12 years ago by Stephan Aiche <[email protected]>