github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

[BUILD] try to fix cdash problem

cdash reports the compilation as failed, maybe because cdash looks for
fatalError string.

git-s...

6701f5c37a6df52198b2e2d264d2aef94233e0ea authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] fixed warnings introduced in [11264]

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11285 6adb6e08-d915-0410-...

16b179098c1df7e23d1375f8ab1f475d9b643e1e authored over 11 years ago by Chris Bielow <[email protected]>

[FEATURE] * print command line of TOPP tool when debug mode is enabled

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11284 6adb6e08-d915-0410-...

b6e1d778e2acfadf0a4a5dadf2e36b8c9d6ea592 authored over 11 years ago by Chris Bielow <[email protected]>

[FIX] fixed minor error in mzXML::writeTo()

* empty spectra in mzXML get the xsi:nil attribute which should have the value "true", but got...

3ce76a85a7b28b9c0603c41734fa4bb0a98c536b authored over 11 years ago by Stephan Aiche <[email protected]>

[FIX] addendum to [11042] fixing compile issues on win-xp 32bit systems

* added missing openmp include

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-m...

29c6fcfacc86ab9defc70e75f70a948c6fbb654e authored over 11 years ago by Stephan Aiche <[email protected]>

[FIX-#535,VISUAL] Fall back to Spectra only

If an input file contains spectra and chromatograms, display only
spectra but output a warning t...

0d2e725ec98eb70062321781b12d12914f9b4e96 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] FileFilter now supports filtering of MS/MS spectra by their collision energy and the width of the isolation window

* added the corresponding predicates to RangeUtils
* added TOPP tests

git-svn-id: https://op...

e3978d7ae964982733967d3100072e12bb0fe702 authored over 11 years ago by Stephan Aiche <[email protected]>

[BUILD] Feature: allow 1:n mappings

allow 1:n mappings between C++ .h files and .pxd files -> one .h file
might contain multiple cla...

79a2e66faa161ac48b61867e40a7e827e209ee35 authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] Feature: PythonExtensionChecker now writes cdash xml file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11276 6adb6e08-d915-0410-...

e56ab56f2f71bbcbf34e662ab5eddea0be3e1710 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix OptimizePeakDeconvolution

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11275 6adb6e08-d915-0410-...

752d61655840cf1ec5848331785470fb7f50f8e4 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix PeakIndex

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11274 6adb6e08-d915-0410-...

4da5acc06170a01b961f3fee67b1590dd9181b87 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix ItraqConstants

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11273 6adb6e08-d915-0410-...

d266cd0ee8413d0c2407400cfd6624d72e958171 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix ProteinResolver

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11272 6adb6e08-d915-0410-...

e5be25d9a98abb292fdcd6230c3475e0f0f58dc5 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix DataFilters

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11271 6adb6e08-d915-0410-...

2ee8ae6a02521360f8d2722b5a9b5db1a98054c8 authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] update ignore list

- various small changes
- more docu on the reported error

git-svn-id: https://open-ms.svn.sourc...

73fba309e67bad3ee2fea483da5b32c6e7ab0e99 authored over 11 years ago by Hannes Roest <[email protected]>

[DOC] pyOpenMS Manual.tex updated

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11269 6adb6e08-d915-0410-...

16f1df6902077b0915c569ad93f5819b3d9994d1 authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] fix checker script

- when typedefs were in the pxd file, it would fail to identify the
correct class -> fix

git-...

c407908ed387009a062a409ed30bb35f0316e38b authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE,NOP] added intensity based filtering options to the IsobaricChannelExtractor

* allow filtering based on precursor/reporter intensity
* default settings correspond to the o...

2c79d5605887264c5c0352ec67f75b78bff63129 authored over 11 years ago by Stephan Aiche <[email protected]>

[FIX] fixed some compiler warnings in TESTs

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11266 6adb6e08-d915-0410-...

af0206098bd5a795f57c91a29620c32204a0d87a authored over 11 years ago by Stephan Aiche <[email protected]>

[FIX,NOP] fixed some cpplint and cppcheck warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11265 6adb6e08-d915-0410-...

c0f636beea45a0da343ee3e898b4723ec9a1865e authored over 11 years ago by Stephan Aiche <[email protected]>

[FEATURE] Adding new TOPP tool IsobaricAnalyzer for analysis of ms2 labeled experiments.

* all analysis steps (channel extraction, isotope correction) are now independent of the
qua...

6510b3ee8aaa84cf2079927f7dfc095d3056b888 authored over 11 years ago by Stephan Aiche <[email protected]>

[NOP,FIX] addendum to [11209] to fix some more conversion warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11263 6adb6e08-d915-0410-...

fb7fba492a654b1f1de8ee297e055bcf62443d15 authored over 11 years ago by Stephan Aiche <[email protected]>

[TEST] add more tests

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11262 6adb6e08-d915-0410-...

dffd18de89afd122dd0b1685493746f2ea9c4319 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] handle create pointers

- use real pointer to base class

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-m...

d6a533bb9f5da89a5923e85cb743dfa055ab992e authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix AScore

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11260 6adb6e08-d915-0410-...

96c11eaf4de488c2a124e8aebbd403a585ad9e40 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix SequestOutfile

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11259 6adb6e08-d915-0410-...

519f73c2d659531f6697aa34c6d3e0227a618796 authored over 11 years ago by Hannes Roest <[email protected]>

[NOP] cleanup

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11258 6adb6e08-d915-0410-...

b1b7fa998ea9f59749b7e92bcb57cb93ce3ffa12 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix PILISIdentification

- handle case with pointer ...
- handle map

git-svn-id: https://open-ms.svn.sourceforge.net/svn...

11f0936083ebf0c58e2bad5c8302eec73e0c8973 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] remove TODOs, fix stuff

pyOpenMS/pxds/PSLPFormulation.pxd
pyOpenMS/pxds/PrecursorIonSelection.pxd

git-svn-id: https://o...

64e23759288b98053704dac807e5e2fbd92edfb2 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix InspectFile

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11255 6adb6e08-d915-0410-...

c0c17e36763d6c4eb3d6f5128106c6db1e8483dd authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix AASequence

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11254 6adb6e08-d915-0410-...

ef44e26cd52cbb7a8d70c8faa85e5eb4bcf22e6c authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix MSQuantifications

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11253 6adb6e08-d915-0410-...

416c6bd06c7ceed5f06e67ebb2dff229fd59f6cd authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix QcMLFile

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11252 6adb6e08-d915-0410-...

bd98c88b11931899bb57c563021677cc842f5070 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix PILISCrossValidation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11251 6adb6e08-d915-0410-...

32e55241ba6c9fb474d9936996c4286cda35f114 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix SemanticValidator

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11250 6adb6e08-d915-0410-...

23ee67a7f2155c511b4b6a0bb0f9fcd22e320e6c authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] pyOpenMS: fix ProteinResolver

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11249 6adb6e08-d915-0410-...

40cd2f35170c574a358ee1f4330a9a7f1711df20 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] fix TargetedExperimentHelper

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11248 6adb6e08-d915-0410-...

288f2a8fbe587f33c9a6c2e526bda478cb8509de authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add Masstraces from FeatureFinderAlgorithmPickedHelperStructs

1: add MassTraces
2: GaussTraceFitter use Masstraces now
3: this only works if we rename the KER...

7aca3fd3b970e671de77339a44a255dbd8233875 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add XMLHandler

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11246 6adb6e08-d915-0410-...

fa7bd2a7c34576c1feec45d5e83b5636366624c6 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add OpenMS::OptimizePick::Data

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11245 6adb6e08-d915-0410-...

c0c488402ba92ec3510bb5aaa5adc30ae8b8896b authored over 11 years ago by Hannes Roest <[email protected]>

[DOC] docu

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11244 6adb6e08-d915-0410-...

680970d5f9b9b2d98d75a1dab4d09d827826c6b7 authored over 11 years ago by Hannes Roest <[email protected]>

[NOP] add comments, more explanation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11243 6adb6e08-d915-0410-...

66e1a09394e4e54135a9b7599061adf2727ec8dc authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add QcMLFile

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11242 6adb6e08-d915-0410-...

7164e08a78724457f4758ed5f1d38af81a5ee2cb authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] add more default imports to Types

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11241 6adb6e08-d915-0410-...

2fbea9ff9b4602eaf25273c29c7b9dec9fe089e9 authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] update ignore file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11240 6adb6e08-d915-0410-...

db1fbb8f3e0cd3dc0c01c5f7ce5ed17889b5611c authored over 11 years ago by Hannes Roest <[email protected]>

[NOP] wrapping now 366 classes, 3794 methods and 62 enums

---- all compiles and tests run ----

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/op...

d5989ba2f3bfdf6afdea8b17eefe47957e059e85 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] Identify problem in Ticket #528, no fix yet

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11238 6adb6e08-d915-0410-...

8e8c3025ad368aca38d1d5e4e8f0f7537ada6322 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] fix various problems

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11237 6adb6e08-d915-0410-...

cb0a667c0bc2f5b355397972c07e9368b23fbfe5 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add more classes

OpenMS::QcMLFile::QualityParameter
OpenMS::OptimizePick::Data
OpenMS::FeatureFinderAlgorithmPick...

48b8a42ac506deb9612e0b9d1067966518c6a230 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add more classes

ParamNode
ParamEntry

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@112...

67113a5f3397eccef78e3ffa00f6880d5c3ad3af authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add more classes

OpenMS::ProteinResolver::ProteinEntry::type
OpenMS::ProteinResolver::ProteinEntry
OpenMS::Protei...

fb97165ce15c56b675b471db212dfc6879e33b4c authored over 11 years ago by Hannes Roest <[email protected]>

fix compiler issue

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11233 6adb6e08-d915-0410-...

bbe263d7b225f30443009c9e4ab31b845a7af7e4 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add internal data structures

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11232 6adb6e08-d915-0410-...

261b1ed34e83a14c04d3fbc814c39de640156a52 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add some more classes

LinearInterpolation.pxd
NonNegativeLeastSquaresSolver.pxd
PeakIndex.pxd
TrypticIterator.pxd
XMLF...

9f4f8e567c36a38c8958e3bf3b9fc09589566e13 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add classes for FILTERING ----- all tests work

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11230 6adb6e08-d915-0410-...

0e56f561e6fa191d198fd8636f3fcd47d10f42c0 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11229 6adb6e08-d915-0410-...

f1291f49180de046f76c319d6079e09b85531d1b authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] add QTCluster datastructure, fixes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11228 6adb6e08-d915-0410-...

52d6a28c0a2cc9402273f550c9e34afa66c503e3 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add classes for ANALYSIS/MAPMATCHING (2nd batch)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11227 6adb6e08-d915-0410-...

503181e64edde80950a9139e3ab3910f343f051e authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add classes for ANALYSIS/MAPMATCHING

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11226 6adb6e08-d915-0410-...

50b1cc172ca73a40e7b89849848212949d2d6900 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add classes for ANALYSIS/TARGETED

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11225 6adb6e08-d915-0410-...

19e54ebd3d47b41f1b8f404303ec0b4f50393f8b authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] add Matrix to LocalLinearMap

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11224 6adb6e08-d915-0410-...

e118b3f2816481997943a5b82d20f90ee935618a authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] fix Matrix

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11223 6adb6e08-d915-0410-...

4a5a203678659b22f00d53ebbcbad420728c06fb authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add Matrix.psd

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11222 6adb6e08-d915-0410-...

d253162fd2c29fc29785563de5a9196396847631 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] fix peak picker

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11221 6adb6e08-d915-0410-...

ed5c1fff8e5fee8b0afc37dd8b822cedda1f6978 authored over 11 years ago by Hannes Roest <[email protected]>

add ANALYSIS/DECHARGING : ILPDCWrapper

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11220 6adb6e08-d915-0410-...

01cd4f8c4af5bf2e503fafd4201d62a65d41973d authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add classe from ANALYSIS/PIP

not finished, Matrix.pxd is still missing.

git-svn-id: https://open-ms.svn.sourceforge.net/svnr...

9aca9deb0b24cf903ae30b3724530c9865664ddf authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add classes for ANALYSIS/QUANTITATION

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11218 6adb6e08-d915-0410-...

d3a64b9eae993da33d7a385dbc17b1a57d2fbc94 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] fixes for TRANSFORMATIONS

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11217 6adb6e08-d915-0410-...

e22734822a5a4f4a7c5f61381a6e47561248eb66 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add classes for TRANSFORMATIONS

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11216 6adb6e08-d915-0410-...

709770dc758b85530c3a2723b7e2504e4850c732 authored over 11 years ago by Hannes Roest <[email protected]>

fixes, new functions, add enums

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11215 6adb6e08-d915-0410-...

32694093900e2cfec2bc4aff8513bc0580357e0b authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add classes for CHEMISTRY

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11214 6adb6e08-d915-0410-...

8b0b6eb963d5a149507b4b589842d0c45b1fe0aa authored over 11 years ago by Hannes Roest <[email protected]>

[INTERNAL] move DataFilter to DataFilters

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11213 6adb6e08-d915-0410-...

4111450eb4bae5369dc17cc1f84a3d2a185f2d43 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] fix typo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11212 6adb6e08-d915-0410-...

3ecfe4d97626cb3cf3b55d3ff832159db636bf00 authored over 11 years ago by Hannes Roest <[email protected]>

[NOP] comments

Chrom Extractor

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11211 6a...

3df77314b39ba40a36b9698a52e33de12b1fc365 authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] cleanup of PyChecker, also print missing enums

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11210 6adb6e08-d915-0410-...

959376ced69c29e867e258fb9552d37a67724bd9 authored over 11 years ago by Hannes Roest <[email protected]>

[NOP,FIX] attempt to fix some windows conversion warnings

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11209 6adb6e08-d915-0410-...

61145824d21a115aaa87bb4e0ef1a31a625d5711 authored over 11 years ago by Stephan Aiche <[email protected]>

[FIX,TEST] switched from std::isnan to boost::isnan to support also older VS versions

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11208 6adb6e08-d915-0410-...

a47e292f779616672d3948bf6ec65c2f72355ebc authored over 11 years ago by Stephan Aiche <[email protected]>

[DOC] typo

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11207 6adb6e08-d915-0410-...

fd9bd426cf94c64b4c9ba65c44dd84ce74edab6e authored over 11 years ago by Chris Bielow <[email protected]>

[FIX, TEST] * fixed failing test

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11206 6adb6e08-d915-0410-...

0a3424bce57c1d63c782fd4fd21955ea9a3f5346 authored over 11 years ago by Chris Bielow <[email protected]>

[BUILD] update pychecker ignore file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11205 6adb6e08-d915-0410-...

ad43c240bbbe2963e22466932eff9171c846ccd1 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] wrap more methods of existing classes

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11204 6adb6e08-d915-0410-...

1e2f41ca841c7410e4cafadcee09572bc09dce45 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] pyOpenMS: added new wrapped methods

pyOpenMS/pxds/PeakWidthEstimator.pxd

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/op...

1d01894a858fc606f0b223ef75921557efb703bf authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] pyOpenMS/setup.py now detects changes in source tree and updates build tree accordingly

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11202 6adb6e08-d915-0410-...

0d88650a5985d40636634e3a4d83ff5111d64944 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add 36 more classes

Autwrap has wrapped 289 classes, 3137 methods and 53 enums. These are
the new files:

pyOpenMS/a...

887cf69b3cd16da757f4ef4515848860c4e1f8b9 authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] update Python checker ignore file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11200 6adb6e08-d915-0410-...

2b973e892b1d160aec354c9d211ed2d69ead0498 authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] update checker script

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11199 6adb6e08-d915-0410-...

bb2ee58803f793edff72645b576ec0cefdb660fd authored over 11 years ago by Hannes Roest <[email protected]>

[INTERNAL] consolidate pxd files (1:1 mapping to .h files)

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11198 6adb6e08-d915-0410-...

29f2db9c9fd8b7aa1e62bf2e1744da92f0857394 authored over 11 years ago by Hannes Roest <[email protected]>

[FIX] fix tests with new autowrap

- autwrap exchanged float->double, thus the tests produce different
results. These now work wi...

3d888d298f977540363f369e95672d5d34ecd29e authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] done, all tests work

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11196 6adb6e08-d915-0410-...

535f43c7e3b33ed463ea7ae4b1ad9712d87742a1 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] wrap 17 more classes

pyOpenMS/pxds/CompNovoIonScoring.pxd
pyOpenMS/pxds/CompNovoIonScoringCID.pxd
pyOpenMS/pxds/DeNov...

a685923bac3723afd81f4cec90a6af9852524a8b authored over 11 years ago by Hannes Roest <[email protected]>

[NOP] documentation

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11194 6adb6e08-d915-0410-...

7e4a5c7f2a3bcd1993f33d0771b37c7cc07b26ec authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] update Python checker

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11193 6adb6e08-d915-0410-...

181b97344b1c7a34b980ad785a70f25a6a778000 authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] update ignore file

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11192 6adb6e08-d915-0410-...

560902dff1a4f1e22c5344d590bfb3676d5ff9c2 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] wrap more classes

pyOpenMS/pxds/AAIndex.pxd
pyOpenMS/pxds/Acquisition.pxd
pyOpenMS/pxds/Attachment.pxd
pyOpenMS/px...

f6597e7e7122b01eb46439c0e0df6b0742bf33da authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] add templated classes to Pychecker

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11190 6adb6e08-d915-0410-...

3907f676b8907a224203b83c234d71ee1873611e authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] wrap more classes (Isotope)

pyOpenMS/pxds/ChargedIndexSet.pxd
pyOpenMS/pxds/InterpolationModel.pxd
pyOpenMS/pxds/IsotopeClus...

ccdb8569b8130a3dd4108aeb5cd8dd213e400ef4 authored over 11 years ago by Hannes Roest <[email protected]>

[BUILD] python checker scirpt

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11188 6adb6e08-d915-0410-...

3f0297946c3a0452af712db97292044d0b0813b0 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] more classes wrapped (SVM)

pyOpenMS/pxds/CVReference.pxd
pyOpenMS/pxds/IonType.pxd
pyOpenMS/pxds/SVMData.pxd
pyOpenMS/pxds/...

0cf0cbe5c53f93431ad697a62a19744335e18033 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] add more classes

pyOpenMS/pxds/CVMappingRule.pxd
pyOpenMS/pxds/CVMappingTerm.pxd
pyOpenMS/pxds/Textfile.pxd
pyOpe...

4f01245edaaf120cd3f18e96e591f5f384b0ccc3 authored over 11 years ago by Hannes Roest <[email protected]>

[FEATURE] support RichPeakMaps

git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11185 6adb6e08-d915-0410-...

7866fec960b701415501b83a81917914c08600d2 authored over 11 years ago by Hannes Roest <[email protected]>