Ecosyste.ms: OpenCollective
An open API service for software projects hosted on Open Collective.
github.com/OpenMS/OpenMS
The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11609 6adb6...
ef997d544b654321501accab39e934cd38b460bd authored over 11 years ago by Stephan Aiche <[email protected]>* i.e., mascot not in http://servername/mascot but http://servername/
git-svn-id: https://open...
52817f02fb31099c1ed23dd449da1d205b1ffb74 authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11607 6adb6...
729ee5438bb9738c62d2b53f7d7bf34db3e29b27 authored over 11 years ago by Erhan Kenar <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11606 6adb6...
22878bc663b90064b7341142bf8fd0b9314d352c authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11605 6adb6...
d4d93fa80affb396b388654375df6942227bfee3 authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11604 6adb6...
f4d136baffacd8b272b8069d5efd1d93ce1ded75 authored over 11 years ago by Stephan Aiche <[email protected]>Instead sort by something stable, here the getOrigin value
git-svn-id: https://open-ms.svn.sour...
ac3accc2d43b583055607c4035d4b466e57645e7 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11601 6adb6...
e8be2a57d04fd19d9f07d3aeb7e3382ebdd0a39c authored over 11 years ago by Timo Sachsenberg <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11600 6adb6...
ec0e7268a0c95bdcfe8f7de615aab91195decb0e authored over 11 years ago by Timo Sachsenberg <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11599 6adb6...
2ac580ccab1e1af0e38006ec17a3560f0fa35898 authored over 11 years ago by Erhan Kenar <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11598 6adb6...
b6799859e33dba8bd627fe738695807170c697fe authored over 11 years ago by Erhan Kenar <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11597 6adb6...
f4cec402d99b535f849b2b18a76017082979d954 authored over 11 years ago by Hendrik Weisser <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11596 6adb6...
2c826f46a6a96a4ec5c20412e95638037c9b06fd authored over 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11595 6adb6...
0894ec55142eee7e668475411bfa239aeed66095 authored over 11 years ago by Chris Bielow <[email protected]>
The new class allows to consume Spectra/Chromatograms and cache them
directly to disk. It implem...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11593 6adb6e08-d915-0410-...
0627968125c97833019089e82e660fb5e4d999a2 authored over 11 years ago by Hannes Roest <[email protected]>
Previously, a full MSExperiment was transferred to the Handler class and
ownership was not compl...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11591 6adb6e08-d915-0410-...
e8ff9e25952c87ca51f912f70204252524805ddf authored over 11 years ago by Hannes Roest <[email protected]>
- bugfix in PeakPickerMRM when dealing with empty chromatograms
- minor improvements in QTCluste...
- set default template argument for IMSDataConsumer
- use MSExperiment for MzMLFile::transform
-...
- explain how to install OpenMS with minimal manually compiled libraries
git-svn-id: https://op...
26be6061e1148a18a84cd76af330e8bca8a67a1b authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11587 6adb6...
87a2442791f38d3f06c60e02b8decffe48d6c9fa authored over 11 years ago by Hannes Roest <[email protected]>
The large sample datasets will be moved to a different repository (for
now)
git-svn-id: https:/...
94f747a3562debb16d30eba67b8eea808542f69e authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11585 6adb6e08-d915-0410-...
fb64b9fc07f9bfffa01845b76b181c32107e1271 authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11584 6adb6...
ff499b9e99e0b6dbef5ce8274a61fcf610d8c94a authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11582 6adb6...
5cb7680d0a34d3a513ac47ff2287b77ffa64968f authored over 11 years ago by Erhan Kenar <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11581 6adb...
28302b831753aaf32e534949718ae13631addf99 authored over 11 years ago by Johannes Veit <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11580 6adb...
167dd4f257f9fa0e4178bdae8f4a4744c690e071 authored over 11 years ago by Johannes Veit <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11579 6adb6e08-d915-0410-...
8f8d92da61019a8d7030bb5e6645e77ee958e6c5 authored over 11 years ago by Stephan Aiche <[email protected]>relying on being in the correct directory. This fixes also problems with CMake's
add_test(WORKING...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11577 6adb6...
3d1ca56770277f9ac47e8f2fbf725779b4d433a9 authored over 11 years ago by Hendrik Weisser <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11576 6adb6...
0c174a4be3c006ce1128b1d0960566158e11df94 authored over 11 years ago by Timo Sachsenberg <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11575 6adb6...
42f2063e88f6d699bc6493d2248b557dd7d1875e authored over 11 years ago by Erhan Kenar <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11574 6adb6...
cb67de6be50ddaed4f7e4f16dcdbb33a1913d35b authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11573 6adb6...
fc5ce40ecedf1d88a6442ad7465c8a796dccd87f authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11572 6adb6...
3621eacd12a5fbbd01984457f45b44178fa8bf68 authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11571 6adb6...
a59ce2c29e2147845dbafba07fb3c4a647f3ba65 authored over 11 years ago by Erhan Kenar <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11570 6adb6...
b7115fab6be9ee0a12044c90edcbd480c22d8323 authored over 11 years ago by Mathias Walzer <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11569 6adb6...
1facf4335a8c377868ca4299c3563e0cef705c73 authored over 11 years ago by Erhan Kenar <[email protected]>* all CTDs exported by prepare_knime_package validate against the new schema
git-svn-id: https...
a7a997899474126f04766e7c11f65ff4babc6a72 authored over 11 years ago by Stephan Aiche <[email protected]>
* includes tests
* is backward compatible to pre1.6.2 param files
git-svn-id: https://open-ms...
906c632d7387c12a1af4ef4d89a5ac1eda3e23c1 authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11566 6adb6...
588b36b54bfef0d42ec63fddbb26e35736a9ddc7 authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11565 6adb6...
4a3fbe1e109b4af9f39ed757371c2a3a169e26de authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11563 6adb6...
dc0ed301fadbff00030780748bfd2a2cdd4478a4 authored over 11 years ago by Mathias Walzer <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11562 6adb6...
eb7a15a5ab4948b76eeb414b7c8ce5b75a7a999d authored over 11 years ago by Timo Sachsenberg <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11561 6adb6...
9fd690ab8ca8fa92303497ad2a33770a8553ceeb authored over 11 years ago by Timo Sachsenberg <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11560 6adb6...
51047f65ae2de2c6eb7d3c57e6ca69adff3318a3 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11559 6adb6...
dfa6069af14d02c41c1a2b7d1611c407b2cc12d6 authored over 11 years ago by Timo Sachsenberg <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11558 6adb6...
3f936233504ef2d54aa1a6b1f2edc481ee93c555 authored over 11 years ago by Timo Sachsenberg <[email protected]>This reverts commit r11549.
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/bra...
512f95984c16e40b1018b59008541c560ac01e6d authored over 11 years ago by Hannes Roest <[email protected]>This reverts commit r11547.
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/bra...
d446655ede2c1130d4c0bf2256b875c2e5df6f71 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11554 6adb6e08-d915-0410-...
9be264739d97c9257a9bef186bde29d07f7b5194 authored over 11 years ago by Christian <[email protected]>All gsl functions are moved to MATH/gsl_wrapper and all gsl includes are replaced by the wrapper...
39cbb9b2bb9bc4f0237cb016c8010cab046cc25c authored over 11 years ago by Christian <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11552 6adb6...
ce80a578d148c1c77aa16d5926c626187e154b18 authored over 11 years ago by Hendrik Weisser <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11551 6adb6...
f62c9db9392205f970a01da8e78d36b5cc874626 authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11550 6adb6...
f0325c081f64d20d4ef024d02eea1d1ab91bc28e authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11549 6adb6...
21c9cb9094d843315908a30624a4684cf5e8ac55 authored over 11 years ago by Erhan Kenar <[email protected]>
- updated linux build instructions with PyOpenMS (and type fixes)
- updated mac build instructio...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11547 6adb6...
cb13335d5ffd47354bc0f2e9cb545ab8746e815f authored over 11 years ago by Erhan Kenar <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11546 6adb6...
055ff322792ea08e321ee1251405b1553dd7da55 authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11545 6adb6...
a363849a0a1457db4670adff6d69e60c5d40add6 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11544 6adb6...
7d95a3b747fb47473b5a3ad74c5383660650976c authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11542 6adb6...
bd798e9432186824c0071b4622125e848f8173f2 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11541 6adb6...
2c0756b42e39d16d23d4d83f2c3b2d0bf0e637db authored over 11 years ago by Hannes Roest <[email protected]>QApplication should be a singleton, fix this
git-svn-id: https://open-ms.svn.sourceforge.net/sv...
acf78e07625403acc4d9844654fc40f4004d8076 authored over 11 years ago by Hannes Roest <[email protected]>* Tests adapted accordingly
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/bra...
4e20e1bb4ad5794c2f6d1fef9b24c0b55713b0d7 authored over 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11538 6adb6...
209288a0a0c465f4678f5ea2b8371bc6b0301263 authored over 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11537 6adb6...
076208ef6afb59c876ccfd2b8f370bbd53a18238 authored over 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11536 6adb6...
5cda262c3341c49784e712a66df73dd06e86a8eb authored over 11 years ago by Chris Bielow <[email protected]>* remove obsolete "tutorial" target (cant be executed platform independent and is basically the ...
25855f339cbe7423f54f12e433348e1ba908d628 authored over 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11534 6adb6...
798e9bb047c974597fcfe4cfcf3a953b2d88e8e6 authored over 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11533 6adb6...
723ffc585888118fa2a9e81500317e5451d9dc89 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11532 6adb6e08-d915-0410-...
ab974df2ea089b9f5a1f73e6b3b6564151a8f15b authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11531 6adb6e08-d915-0410-...
92a1f1e66d85ac4a9bfe788379042675414a39c8 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11530 6adb6e08-d915-0410-...
9f9d1a8140d6ebdce726855c9399ef46dc4cc2f0 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11529 6adb6e08-d915-0410-...
f79175b7038ff0d0cad251c3015722e2e344a48b authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11528 6adb6e08-d915-0410-...
be5c3b0457542b91624bb4fa8eddec1512d7aafe authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11527 6adb6e08-d915-0410-...
4cb4ccf685101d52b35b46a12312de821c983465 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11526 6adb6e08-d915-0410-...
b6ce878aa20130a99df0d93578fef7218b4db815 authored over 11 years ago by Hannes Roest <[email protected]>- using loadSize it is not possible to estimate the file size
git-svn-id: https://open-ms.svn.s...
efba72e8ea2e603fea0bac35645a35be6ebf3b58 authored over 11 years ago by Hannes Roest <[email protected]>
more informative message about which Python interpreter will be used for
building pyOpenMS and h...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11523 6adb6e08-d915-0410-...
6efb519efec64576dd0e3692d158c2f22b54a4d3 authored over 11 years ago by Hannes Roest <[email protected]>
* modifications were written as mass@N-term but should be written as mass@[
* adopted XTandemI...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11521 6adb6e08-d915-0410-...
08422c305d843c0a75f3ef0ece50878d04c7b8f3 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11520 6adb6...
8a1f69b0df0742204b8b9bbdbe4bf9056bd7e574 authored over 11 years ago by Mathias Walzer <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11517 6adb6e08-d915-0410-...
c26ab991be416d88acbd59c37d7fe7b348f97bf3 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11516 6adb6e08-d915-0410-...
e424dc079d0dbfec8edf33d9bc7201d97fa89588 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11515 6adb6e08-d915-0410-...
300573aa437c3c281ff7ad2a5c705aecffdf1731 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11514 6adb...
f96419ff6607730eb91de05074e31db206ec4590 authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/branches/Release1.11@11513 6adb6...
9188c7b466e0a0b3572f6b2e869b2f9e62c50fab authored over 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11510 6adb6e08-d915-0410-...
c29e8385c145bc272baa63774edef97db612e38b authored over 11 years ago by Hannes Roest <[email protected]>[TEST] add test for MRMTransitionGroupPicker
git-svn-id: https://open-ms.svn.sourceforge.net/sv...
ca8bcb4394cd5cf1beebc0688fd07c24add51659 authored over 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11508 6adb6e08-d915-0410-...
387e2d10f10f6adadd3570f268d3d56a5a8da6e0 authored over 11 years ago by Hannes Roest <[email protected]>
- adapt peak calculation to how PeakPickerHiRes defines the peak. This
assumes that at least 3...
- add "corrected" method which uses the smoothed chromatogram to pick
- ignore peak width when l...
- if OpenMS was compiled with Crawdad support, this option can be chosen
for MRM peak picking
...
Crawdad is a chromatographic peak picker from the MacCoss lab. This
patch allows to link OpenMS ...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11503 6adb6e08-d915-0410-...
1b364c13c5dfdd308987a55c274686e14c566e03 authored over 11 years ago by Hannes Roest <[email protected]>add to test
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@11502 6adb6e...
bdf93b13b16c55e563a147209157791257eb18fa authored over 11 years ago by Hannes Roest <[email protected]>
check that the right and left borders of all peaks found are consistent
(to notice shoulders and...