Ecosyste.ms: OpenCollective
An open API service for software projects hosted on Open Collective.
github.com/OpenMS/OpenMS
The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS
a68290eb42cf9cf2547004f30bab53a998c1581d authored over 10 years ago by Stephan Aiche <[email protected]>
7cee12ee48bb5371411489862b08295f602f171a authored over 10 years ago by Stephan Aiche <[email protected]>
* with this commit the individual commits get their individual class test projects
b8db2beecbb1ecd6f4a4fff4872d12a2c9ceb77a authored over 10 years ago by Stephan Aiche <[email protected]>
* target_include_directories was introduced with cmake 2.8.12 which collides with our
cmake ...
fbb76f43da358458563f49afa4ff62e68ffaa59d authored over 10 years ago by Stephan Aiche <[email protected]>
6e397e4f02e23a2dd61f3586447c424e83a955b3 authored over 10 years ago by Stephan Aiche <[email protected]>
6fa69ddd8cadc406670811c1c11c5038e2b4d8e9 authored over 10 years ago by Stephan Aiche <[email protected]>
bb153bbe44483f79f3ba420544bd3b68bfff0f47 authored over 10 years ago by Stephan Aiche <[email protected]>
* adapted File::find accordingly
7a3fc78aa507abe294850fba42719423f81c0d5c authored over 10 years ago by Stephan Aiche <[email protected]>f72ed5c1d09a6ce0809009ac7e05795c5afe8f40 authored over 10 years ago by Stephan Aiche <[email protected]>
6ad5a5b59398d86c3f215511c805d80b013379f2 authored over 10 years ago by Stephan Aiche <[email protected]>
3bed14a8bca6872e2d3d5af3a64ba418bf9d13e0 authored over 10 years ago by Stephan Aiche <[email protected]>
6e38336b40ecab1cc7cf3a6c2e6eb351a99decc2 authored over 10 years ago by Stephan Aiche <[email protected]>
10d5a633dab7bdce9f94648c09a5836fe168620e authored over 10 years ago by Stephan Aiche <[email protected]>
bed9e06fe189499605f16264b6c8ccfa30695ec3 authored over 10 years ago by Stephan Aiche <[email protected]>
8ba652a97664a7d863ed3bf4aea4561548e2f53c authored over 10 years ago by Stephan Aiche <[email protected]>
877dcaa97e8b3a79efddc53e59b27c02d8b4231a authored over 10 years ago by Stephan Aiche <[email protected]>
* fixed cppcheck tests w.r.t. to the new repository layout
* fixed cpplint tests w.r.t. to new...
24ee6a5ddc68db1448cbec2901473fbd114ca388 authored over 10 years ago by Stephan Aiche <[email protected]>
7cc94dc0a2d19d815d680473083b4d37a76c174e authored over 10 years ago by Stephan Aiche <[email protected]>
f753ebd8bf77dba38b4d6c88fa6e7092d19b851c authored over 10 years ago by Stephan Aiche <[email protected]>
* XMassFile_test doesn't compile, fix in follow-up commit
938f1921bd3b34f2c635978e64cd0331b60e4227 authored over 10 years ago by Stephan Aiche <[email protected]>8c503f5beaad2f276b68956852626dd7d216b6cd authored over 10 years ago by Stephan Aiche <[email protected]>
d15b89d2a2e282418c4804ada32cc3526f170753 authored over 10 years ago by Stephan Aiche <[email protected]>
ff2cbc4c10e0cac534904897bd94a6d43470f86d authored over 10 years ago by Stephan Aiche <[email protected]>
72a2176c33dae2a123c77d66723095f4a4f2d301 authored over 10 years ago by Stephan Aiche <[email protected]>
86ec6e9de0cbd7e312aa5ffb607b3f0faa75f9bb authored over 10 years ago by Stephan Aiche <[email protected]>
ea6031246da106e9984656866511ea6a26856b6f authored over 10 years ago by Stephan Aiche <[email protected]>
* fixed some doc related build issues
a2c9055ee170e6df57367d3354f6cb104586bd20 authored over 10 years ago by Stephan Aiche <[email protected]>9eb82f00dc04f1dec642c2ef4ae13083c5f400b1 authored over 10 years ago by Stephan Aiche <[email protected]>
c126e29c79e07cbeae15bb0fc7041447d10cd1d5 authored over 10 years ago by Stephan Aiche <[email protected]>
* customised variables to point to correct locations
* removed obsolete qt hack
* fixed test ...
ee4177edaa18a2bca8ded9e0a75b4a5b0bf96b1a authored over 10 years ago by Stephan Aiche <[email protected]>
a91b605b07a1a93de372b641e4b98d60ac74f960 authored over 10 years ago by Stephan Aiche <[email protected]>
[FIX] PeptideIndexer crashes on empty idXML (#653)
da8f72fabd372d60b52582a117f553045666c2d7 authored over 10 years ago by Stephan Aiche <[email protected]>[FIX, INTERNAL] make "void DocumentIdentifier::setLoadedFilePath(const String & file_name)" not ...
cf6424bbd71b6380863516e5d3e16f8e177d5851 authored almost 11 years ago by cbielow <[email protected]>
on Windows the tests below might fail when OpenMS is configured with a
OPENMS_GET_TEST_DATA_PATH...
on Windows the tests below might fail when OpenMS is configured with a
OPENMS_GET_TEST_DATA_PATH...
- added tests
- added check for empty FASTA
fixes #653
7385769326df3804ab0aba52b3062ae00d42f3ba authored almost 11 years ago by Chris Bielow <[email protected]>55993ae9bbe13b9b03cba7295db92fe6b599ccc1 authored almost 11 years ago by Chris Bielow <[email protected]>
0d5a4f70717544cc4994aed92a8024d4cd78e6e7 authored almost 11 years ago by Stephan Aiche <[email protected]>
4e498dba59f8d4190d063936d1a919a82dd718fa authored almost 11 years ago by timosachsenberg <[email protected]>
Fix ms numpress
7958ac43f983d8a2a50560885b66e5580826ed91 authored almost 11 years ago by Stephan Aiche <[email protected]>e08baf94ff7c7d8b097cf92e14d80989e67a67f4 authored almost 11 years ago by Stephan Aiche <[email protected]>
fix pyOpenMS build on certain Linux distributions when no contrib is
present (libsvm is not foun...
5953711b8d6caa6ee7e1391d86d362324c93c7ac authored almost 11 years ago by Hannes Roest <[email protected]>
b28c30ef4879e3427b68ef7b92fccd6c33e8d26a authored almost 11 years ago by Hannes Roest <[email protected]>
* disables line ending conversion for test data
* fixes #647
- allows OpenMS to also read ms-numpress files (and not complain any
more about unknown CV val...
- wrong description was used for MS:1002313 CV term
30b19b9a2c49f30fa2854b7d5253eaa87bb6859b authored almost 11 years ago by Hannes Roest <[email protected]>
- the corrupt file should not be read but rather a ConversionError
should be thrown
- update to commit 21259b4a9eba62e8c398c2cfef4e80b875ff91d5 at
https://github.com/ms-numpress/...
97eb98f39b7b0419e8a5283680dc026c6f034060 authored almost 11 years ago by Hannes Roest <[email protected]>
fix header macros
aa3a36a5523cc1b6f09826f2a5ec2aeed5d9ae3a authored almost 11 years ago by Stephan Aiche <[email protected]>add more information into README.md
615ff664731246f24dc1c74c3be3b696f8810794 authored almost 11 years ago by Hannes Roest <[email protected]>58fca77db0abdb78069408c5548e02ba77e9ebab authored almost 11 years ago by Hannes Roest <[email protected]>
bed5316620deebe698fc61b388ff727714fb2945 authored almost 11 years ago by Hannes Roest <[email protected]>
- include all necessary headers for StatisticFunctions in the file
itself
- ensure that test w...
The complete SVN trunk repository was downloaded from its location at
sourceforge, cleaned up (b...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12126 6adb6e08-d915-0410-...
7ec0a0390b03bd3d3185c3cb59937834f8f8ba2f authored almost 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12125 6adb6e08-d915-0410-...
8df1d84c74b63d4f493c2dae47dd3c3fd7b10d44 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12124 6adb6e08-d915-0410-...
c1ab8ab59740b5545c6542d2533ded88a96de1f2 authored almost 11 years ago by Chris Bielow <[email protected]>* the resulting debug assertion caused the nightly builds to halt and wait for user interaction...
cc9a16ac11b38b9546db3587aa1bcd1f6dad7a1f authored almost 11 years ago by Stephan Aiche <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12122 6adb6e08-d915-0410-...
5f235895994dc41fd916baee6c66ac55077a3d51 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12121 6adb6e08-d915-0410-...
3f693892e77f9c25852b53cea8736021e9026772 authored almost 11 years ago by Stephan Aiche <[email protected]>also clean up NoiseFilterSGolay and NoiseFilterGaussian (low memory)
git-svn-id: https://open-m...
06f7f7fce2438fd09b176e9f16c7aac7677e5bb9 authored almost 11 years ago by Hannes Roest <[email protected]>
- undo chromatogram estimation (did not work as expected)
- rather write index
git-svn-id: http...
99a065db9c03c596356b1f53cf6bca5c894d4ddd authored almost 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12118 6adb6e08-d915-0410-...
ba943673a56d499458bd62c03e6cae55cce7700e authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12112 6adb6e08-d915-0410-...
924caf73cbd4676bbe5e460d7e28914a6edd79d9 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12111 6adb6e08-d915-0410-...
41cce1d33da656b0fd592d36c406dd9f48ec8a47 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12110 6adb6e08-d915-0410-...
9dab4c6cda3e1327c1ada439a08d4c818ab6541e authored almost 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12109 6adb6e08-d915-0410-...
ed33b14c9c6c8e74ede978fc8024108cf0630238 authored almost 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12108 6adb6e08-d915-0410-...
17e7167322b19edf38ea25eb68a31eb9595e502f authored almost 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12107 6adb6e08-d915-0410-...
db3de994630308c864b1b633aeeaf9262b28b246 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12106 6adb6e08-d915-0410-...
09424984562fa641643633d2de8fc19bb72b4d82 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12105 6adb6e08-d915-0410-...
f09a0cd9801c8062e28e42aacf8239a51bc747f9 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12104 6adb6e08-d915-0410-...
e329db39ca654f9f0fe96c3ebf4d939fbedde6e1 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12103 6adb6e08-d915-0410-...
d01bddb6a4fb5692351ee5f0c8c9948a4580a04c authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12102 6adb6e08-d915-0410-...
ceaada5b9db2525276036b6e55b0402d0d3fe418 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12101 6adb6e08-d915-0410-...
03d07c11cd95f3036b7c6344e06fce16fac0ff65 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12100 6adb6e08-d915-0410-...
c5bb366ced01929c9b75bbaf885cf552dd8aa05a authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12099 6adb6e08-d915-0410-...
9500476d59d38b5ffe0520d2d7fec8cc52c91d19 authored almost 11 years ago by Hannes Roest <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12098 6adb6e08-d915-0410-...
db8bc966d363f136b24941d0151496902280ba62 authored almost 11 years ago by Hannes Roest <[email protected]>- XMLValidator now also natively validates TraML files
git-svn-id: https://open-ms.svn.sourcefo...
bc6e64e0d7abda8a173cdfebd4cb24fc84cc90f3 authored almost 11 years ago by Hannes Roest <[email protected]>This avoids text overlay.
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/Open...
6e6205023801fdc1cc4a22e90af2a7d921b0fb83 authored almost 11 years ago by Chris Bielow <[email protected]>Example: "[n]-ProteinQuantifier-out" and "[m]-ProteinQuantifier-peptide_out"
git-svn-id: https...
f4c2b15b19b7e45df3db717b4eefa3c94f635075 authored almost 11 years ago by Chris Bielow <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12088 6adb6e08-d915-0410-...
3e4bef81da92b850cd2bb6896dcab98c69e8cebb authored almost 11 years ago by Chris Bielow <[email protected]>
* embeds now also the precursor charge as reported by the instrument
* adapted corresponding t...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12086 6adb6e08-d915-0410-...
b71cc3b643526e422f3a6824b420c9c937760a20 authored almost 11 years ago by Chris Bielow <[email protected]>* rewrote tests for IsobaricChannelExtractor and IsobaricQuantifier
git-svn-id: https://open-m...
396f610737eece63ea535803d81d56fa15680663 authored almost 11 years ago by Stephan Aiche <[email protected]>
- add openFile function
- test loading of indexed mzML file
- test random access
git-svn-id: ht...
146339b9b768abc9fd795e217f10bc3a82f6d383 authored almost 11 years ago by Hannes Roest <[email protected]>
- fix for Python 2.6 (no assertIsNotNone)
- replace pyopenms.Spectrum with pyopenms.OSSpectrum i...
git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12082 6adb6e08-d915-0410-...
93e7e0f7621fff59386720f895143a424459a376 authored almost 11 years ago by Hendrik Weisser <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12081 6adb6e08-d915-0410-...
25e3e25acd0e3c3197e095bb0745d6d26b78758d authored almost 11 years ago by Hendrik Weisser <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12080 6adb6e08-d915-0410-...
44ceeb370f85cb2f1c53d807bd0edb955b84ed1c authored almost 11 years ago by Hendrik Weisser <[email protected]>git-svn-id: https://open-ms.svn.sourceforge.net/svnroot/open-ms/OpenMS@12079 6adb6e08-d915-0410-...
029b9e55435f9614d84845c60bfb17315e28cd48 authored almost 11 years ago by Hendrik Weisser <[email protected]>* [12032] missed to adapt also moc call for TOPPView_test
git-svn-id: https://open-ms.svn.sour...
4cbb3781a63071f61bdc9f3587fc77f235610d65 authored almost 11 years ago by Stephan Aiche <[email protected]>* [12074] missed to rename method also in FeatureFinderIdentification
git-svn-id: https://open...
f045c26716fc90017e0d012e219890525c3d926a authored almost 11 years ago by Stephan Aiche <[email protected]>- fix issue when the last field in the tsv is empty
git-svn-id: https://open-ms.svn.sourceforge...
21eabab6ba72ab5aeb6b1e81b5e24007f717f668 authored almost 11 years ago by Hannes Roest <[email protected]>* extended test for precursor purity extraction in IsobaricChannelExtractor
git-svn-id: https:...
eca3b3152cff0dd4a868240e6996ed585d3aaa91 authored almost 11 years ago by Stephan Aiche <[email protected]>