github.com/OpenMS/OpenMS commits | Ecosyste.ms: OpenCollective

[FIX] fixed reading of empty spectra

fa0e3bb2ee27e6e11bbd9d337ba24fddb6d235ee authored over 10 years ago by Stephan Aiche <[email protected]>

[FIX] fix dereference of iterator

- vector iterator front() is not dereferencable if vector is empty
- thanks to @aiche for findin...

3a22ee8b2a044032a991011d1a0281f299bdd646 authored over 10 years ago by Hannes Roest <[email protected]>

[BUILD] disable -Werror by default

- configure travis to use -Werror in gcc to check all incoming pull
requests
- Werror does not...

9bb6cb11615c62a2438213ec6335b15a06f7527b authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] last fix for Werror on gcc 4.8.1

9618d15cf99c1385451c9e6ccc249a73686fc04f authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #840 from hroest/fix/fixpytest

[FIX] fix pyOpenMS test

31f72b06a81a13becb1b80188e34e67f4fbe1d52 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix pyOpenMS test

0ea58c96a92ebc0848a6b092d78be171746b0242 authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #834 from hroest/fix/fixWerror

Fix/fix werror

f551b850b8a6629ba06dc8d71f635b4fe7359c68 authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #835 from cbielow/fix_splineSpectrum

Fix spline spectrum

d8c1a446861f04087b1faf1ecaa7311ab3463432 authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #838 from hendrikweisser/fix-misc

[FIX] fixed uninitialized pointer warning

b9bc615918afd195af459bb8916ab6f250e85843 authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #836 from grosenberger/fix/mrmrtnormalizer_test

[FIX,TEST] MRMRTNormalizer_test: Windows compatibility

86aeff5be6159ef7877651131a4e6e431c0d1923 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fixed uninitialized pointer warning

b79df9a7b222fc005b8caae4911c94ebb5b58899 authored over 10 years ago by Hendrik Weisser <[email protected]>

[FIX,TEST] MRMRTNormalizer_test: Windows compatibility

d2b6ffb2942faae222a752513e41e038f8bd5fab authored over 10 years ago by George Rosenberger <[email protected]>

error handling for faulty spectra; more cleanup and tests

7349575decb47b91cf52e03e28dfec90393641c6 authored over 10 years ago by Chris Bielow <[email protected]>

[#803] Extensions

- added min/max values for options
- changeComma -> fixDecimalSeparator
- reformated brackets
- ...

921d5114fe1a0cffdc3fb8f062d93c6e43b17e66 authored over 10 years ago by Petra Gutenbrunner <[email protected]>

fixed loop vars

d70dcd420e5e41f4c035b5b543e8be6fda91b26b authored over 10 years ago by Chris Bielow <[email protected]>

hide default Ctor; add missing tests (no content)

c8e6a70640681f99cd52d66722b78f710347272a authored over 10 years ago by Chris Bielow <[email protected]>

fixed segfault (>=0 issue)

4c855571817587ab8b386063f768e6c7ec68fe4c authored over 10 years ago by Chris Bielow <[email protected]>

made SplineSpectrum::Navigator public (not usable otherwise); fix compile error (VS2013) due to missing include; fixed interface(names); fixed intendation

8707b2c798a2543be1125c43a51417df054a9f3d authored over 10 years ago by Chris Bielow <[email protected]>

[BUILD] turn on -fvisibility=hidden for gcc

a7c0c1b0e2d987731586257a8d1b2324d38d5b03 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] add DLLAPI to two functions

- these two explicit template initializations are only ever included in
BaseModel.cpp and are ...

a12276b1ceee3aa98cc042ab861932850fd7faf5 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] add DLLAPI to assignment operator

- since the assignment operator of ToolDescription is available through
the API, it also needs...

b6baa190b848b704f50773d5a295a2056907d613 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] add DLLAPI to two functions

eb13270aa750f4bafcdd16f2d21805c97e863934 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] add static cast (no narrowing conversion)

c125e7f95fcb5eff08a76ec3633e3b2fefc06328 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] removed unused typedefs

89f22f14cd26da6349cf41093827acadb8ac0272 authored over 10 years ago by Hannes Roest <[email protected]>

[BUILD] do not warn about unused functions

- Wunused-function is a concept with very limited utility and it will
warn about all files tha...

385123ac0c2bd40c97ae018064a0c1c0dfe395a8 authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #831 from hroest/feature/FixAllGCCWarnings

[FEATURE] fix all gcc warnings and turn warnings into errors

151aa82abc05722f980b0460203953012325942a authored over 10 years ago by Hannes Roest <[email protected]>

Merge branch 'develop' into feature/FixAllGCCWarnings

4292c9dd587e835ecb7946ffe4787065a4c1704c authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #800 from lars20070/feature/FeatureSetFinder

spline interpolation of MS1 spectra

036df7045288918a479dc48d3991dacf8d9b3fb7 authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #832 from uweschmitt/pyopenms_fix_decls

several pyopenms fixes + updates

60926be1cf87ffada933c9ae4534e8fbbe8b5f0f authored over 10 years ago by Hannes Roest <[email protected]>

[TEST] test corrected

f95b2393ea40ab8730057d060d2f530a89fff002 authored over 10 years ago by lars20070 <[email protected]>

[INTERNAL] camel cases replaced by underscores

e0a9537141fa2d8b73c7fe2e4aa4ca3d29650be4 authored over 10 years ago by lars20070 <[email protected]>

[PYOPENMS,FIX] fixed broken caused by 43f2230

d66a795feccdc079a769ce05d05ecd5e6a6ed0b2 authored over 10 years ago by uweschmitt <[email protected]>

[PYOPENMS,FIX] fixed missing conversion for DataValue::empty_VALUE

479d7eb933a1a0b4d9f67bce68d62814698eeec9 authored over 10 years ago by uweschmitt <[email protected]>

[PYOPENMS,FIX] fixed tests due to commit 2bca6d0

4d0816cb540183e910162eff56ddbc6dd09e16ff authored over 10 years ago by uweschmitt <[email protected]>

[PYOPENMS,FIX] fixed MRMRTNormalizer.removeOutliersRANSAC

b498af097ea7a0ec62e492e8ea21044d8a77cb06 authored over 10 years ago by uweschmitt <[email protected]>

[PYOPENMS, FIX] fixed wrapping error in MetaInfo.getKeys

2bca6d0ac97388183d796371db80428e96c5c2b0 authored over 10 years ago by uweschmitt <[email protected]>

[PYOPENMS,FIX] fixed static method decl AASequence.fromString

43f2230277cd747e7a346ba57a3ce9351378fec2 authored over 10 years ago by uweschmitt <[email protected]>

[FIX] remove dead code (thanks Chris)

6598579891ba71e0ea181df25e7dafb443a8c28e authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] codefix for debugging

4b64bce7aab836965ef4d07409a696c1935e403c authored over 10 years ago by Hannes Roest <[email protected]>

Merge branch 'develop' into fix/warnings

14d2604633a67c6d7dd692a67ca8b3b4e4f6db3f authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #819 from hroest/feature/custom_iRT

Feature/custom i rt

d9f9ceda51b48c383161f38ecb0b8fb2631fa8f8 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] initial values

7ce8e5c10165e84ebdd3ac76e2bd7699b7744204 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] check return value of fread

37305842e3f15eb1a4936ba2ef6810aa5613f8a7 authored over 10 years ago by Hannes Roest <[email protected]>

[BUILD] turn on Werror in gcc

9ccaf32cd75197b5bfd14197aef13159290a90b1 authored over 10 years ago by Hannes Roest <[email protected]>

[BUILD] no warnings with unkown pragmas in gcc

fae9cd7d937556466109e653c7a28e275e09b4b4 authored over 10 years ago by Hannes Roest <[email protected]>

[BUILD] extend gcc options

86bd8bcc4c7f95542af12aa06f41f69419f381c8 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX/TODO] initialize variable

0b362af547ce73133376c2e98d6ea8f58066e882 authored over 10 years ago by Hannes Roest <[email protected]>

[TODO] check return value

97140a6204781163b7ff0af1d06835661b085cd7 authored over 10 years ago by Hannes Roest <[email protected]>

[TODO] unused variable

4a4348f7d12bd15d3946db507d79acd5a2ea2fef authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] unused variable (except in Debug / assertion mode)

ae98aa7d0f46f6149ec89ff0dba3ed9f01059be8 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] unreachable code

f4cacd52db5a8dc67948c87964333d03d06d0774 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] correct check for find function

4fd9a57ebf413f937de4a4b4e21605e522237ac4 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] sign-compare fix

d7c6eaee7fea9e9e8375e058ce033a66c25fe1c4 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] unused variables

558b8d6a95df0eab91165042876959d322168576 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix shadow warnings

c1c76430d4a49bf1c5ce743b4236ad4b5b131409 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] debug fix

5a7dde53780b3295d3cbf9fec79733fafe9d6a49 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] unused variables

a9a58332b558b5c3975aa9eba0bc18806fbbac19 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] unused variables

0cfcdc99268e4650fcdbe7edf648f2a810885aea authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] added pragmas

479290a89bb15d9098588cadc43d215748f05107 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] sign-compare fix

692ab5bb67980ea521e541e48ea8fbb97f79b103 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] sign-compare fix

64736d8aae03f01a28c89615814ddb548fa84c6e authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix cast

de7419f54143d4837397d7e2e5e01f96d5176b7e authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix warning unused variables

7d9e996a12f377ba9e055aeee340f21fa73a7b55 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix warning unused variables

8e090e3b59a37c67975a9544c9a492411b87a230 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] add virtual destructors

52420ff96f7b109d264e6702946a6e985dea035e authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #820 from hroest/fix/warnings

Fix/warnings

6520b009333aea0779484f7c15a808f9fb1aa88d authored over 10 years ago by Hannes Roest <[email protected]>

Merge pull request #827 from aiche/feature/export-fixes

[FIX] fixes export macro warnings

45cc5a4c797b5bc41c50a038af5ec7e7bca7c856 authored over 10 years ago by Hannes Roest <[email protected]>

[BUILD] fixed error in cmake script occuring when boost was not found

* only formating in SignalToNoiseEstimatorMedianRapid

d3d60770cc72c529a61e456a3f4e7e8b42a26cd9 authored over 10 years ago by Stephan Aiche <[email protected]>

[FIX] fixed DLL export macros in openswathalgo

d7ea6a40bd96a58332e085394f84945c6b46d0f9 authored over 10 years ago by Stephan Aiche <[email protected]>

[FIX] fixed macro positioning

558c419c23a8a54cb0d87ff83e2372d26cacda56 authored over 10 years ago by Stephan Aiche <[email protected]>

[FIX] fixed remaining attribute warnings by moving the macros to the correct location

de8042beffe54b06dfbde1ee695c7f48eb92e68b authored over 10 years ago by Stephan Aiche <[email protected]>

Merge pull request #824 from OpenMS/fix/Coverity

[FIX] fixes some coverity issues in SuperHirn classes

f9b242face329db4bf1a8dd4c60d2eeb96948d1e authored over 10 years ago by Stephan Aiche <[email protected]>

Merge pull request #826 from hroest/feature/funny-pictures

[FEATURE] interactive project stats in README

8d82330333e16b0ed75b4a81df9d6156a19dcbc1 authored over 10 years ago by Stephan Aiche <[email protected]>

[FEATURE] add another funny picture

2c6fc6ae8b969b60e1984e37f2f8ca474b0c9e2d authored over 10 years ago by Hannes Roest <[email protected]>

[FEATURE] add funny picture

ab8ccfb4c8f8624e5a3e61cf96b5a73d09e8690b authored over 10 years ago by Hannes Roest <[email protected]>

[TEST] testing by sampling two Gaussians

0d0f26dd6faac24d6f7cd12410de519bb0472101 authored over 10 years ago by lars20070 <[email protected]>

Merge remote-tracking branch 'upstream/develop' into feature/FeatureSetFinder

ce35e7fca383b082bdcf0ef55d12c1786732b962 authored over 10 years ago by lars20070 <[email protected]>

Merge pull request #823 from OpenMS/feature/update-numpress

[FEATURE] update numpress

b79145469553b720ab71b49168ea3ea05758a24f authored over 10 years ago by Stephan Aiche <[email protected]>

[API] by reference

46197c2d6d6c85ec389c3fc373589a53c2c5eb85 authored over 10 years ago by lars20070 <[email protected]>

[API] removed getSplinePackage - never used

617650bd3f2d156d3d84865dcbc8bd2086d56205 authored over 10 years ago by lars20070 <[email protected]>

[FIX] fix forgotten code

77f5412b7e00ecc3ad755449a20d62c59c62b08a authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix forgotten code

58c72f8eb8944795d5f113b9a73ba1767603c15f authored over 10 years ago by Hannes Roest <[email protected]>

[API] using more const

5fba6073c9453801093b88eb7f583114cb55f7f3 authored over 10 years ago by lars20070 <[email protected]>

[API] by reference

31a0d7e4d429649a68620db600a3ed04acff051a authored over 10 years ago by lars20070 <[email protected]>

[INTERNAL] ensure sortedness in x

a0c17b64a20f454a851c41fe9f7f89fe11b4cc3f authored over 10 years ago by lars20070 <[email protected]>

[INTERNAL] modified constructor

9695db8c3dfd2524f49cc925cb5f381e6da66d10 authored over 10 years ago by lars20070 <[email protected]>

[FIX] fix memory leak

Coverity fix
fixes 1079517 Resource leak

- prevent memory leak by deleting the temporary LCElut...

dd498c8da7b8dc768ad78ede0b7651102cf9eee5 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix memory leak

Coverity fix
fixes 1079516 Resource leak

- add_feature copies the given feature into the vector...

db2b3dc5edebd5dd8390d6e8ed797ddee0d34b98 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix uninitialized variable

fix Coverity
fixes 1182336 Uninitialized scalar variable

offending variable: GaussFitter::Gauss...

adc1177a51ad2664016a1c76accadc0d956a0dd3 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] update ms-numpress code

update external code to version 7c24b55b01abab8f0e943df9350046dd57a9bfad
of the ms numpress repo...

fa5ef7ab1b647d584b521be3747b9720ad299874 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix ms-numpress macros

- prepend MS_NUMPRESS to ms-numpress specific macros

1b41543fa1ecd7cbd962a07fece3d3da095394b0 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix 57c9168df31a20b671d7d10ba0f8813fd2c1499c

2130301a333f2efa506e6c5a2047e4f9f484d6e8 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX,BUILD] fix for Windows (add OPENMS_DLLAPI)

e6c7cacb197601ff3940ef032f53d65995c5ce80 authored over 10 years ago by Hannes Roest <[email protected]>

[INTERNAL,DOC] cleanup, typos

57c9168df31a20b671d7d10ba0f8813fd2c1499c authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix reduced variable scope, remove shadowing

8b7a7ddbe41aff2f46a7b268ecf18bbe83223306 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix shadow warnings

edbe8a9c2928adf2045a59f5a90cb9cf12b14482 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix shadow warnings

40fd65e2b069c95ce8e1a2a76a391838a746226f authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix shadow warnings

815bd0caf6f03bf8978b5b7157dff626476bc810 authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix shadow warnings

d76a5d55fe42da2905a4b13222c3de8e26a453ba authored over 10 years ago by Hannes Roest <[email protected]>

[FIX] fix shadow warnings

20eef71f33a210c9f89e5fc5eef5e38297707570 authored over 10 years ago by Hannes Roest <[email protected]>