Ecosyste.ms: OpenCollective
An open API service for software projects hosted on Open Collective.
github.com/OpenMS/OpenMS
The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS
a682aadfe40582c1381c53a26fee73ab11f836ed authored about 10 years ago by lars20070 <[email protected]>
5da6d82e885ae7114b18cb3d70c99cb3e03c09d1 authored about 10 years ago by Hannes Roest <[email protected]>
31cae73441bb1fb9332eb785c4feb63eec86e8ac authored about 10 years ago by Hannes Roest <[email protected]>
287c02646a078f3304cb2bf717000ce3cffbdaab authored about 10 years ago by Stephan Aiche <[email protected]>
4b419f73ca786e395c0892eee8ead3cc7fdf57fa authored about 10 years ago by Hannes Roest <[email protected]>
01a82adaa2e677cfacee0d56dbd5641f884f6e2f authored about 10 years ago by Hannes Roest <[email protected]>
0ad0d38ebf76e134731366722a9a7fb01d39dfbe authored about 10 years ago by Timo Sachsenberg <[email protected]>
cea8db25f0f9dec2b406200c0652dbd4e985e140 authored about 10 years ago by Timo Sachsenberg <[email protected]>
598664ab86064ac4fc4ca43cb571a5251a275cbf authored about 10 years ago by Stephan Aiche <[email protected]>
* fixed segfault if getMS2Identifications but no simulation was performed
c1abd32b04703210ed0714ee523e01c7887e7164 authored about 10 years ago by Stephan Aiche <[email protected]>f19b307351251c58444c7035bd019100f2a1045f authored about 10 years ago by Hannes Roest <[email protected]>
- add a low memory option for mzXML/mzML -> mzML conversion
- add an indexed mzML option to prod...
919f1e4055457d808d2828ce61d4ceed2463320b authored about 10 years ago by Stephan Aiche <[email protected]>
fe5facda34f7b53f19d650680b62f9cf79c8b5fc authored about 10 years ago by Stephan Aiche <[email protected]>
* all hits are exported in idXML scored/sorted by their intensity contribution
8a88d43de58844fbb7b2a181a7f35d0ca96cab3a authored about 10 years ago by Stephan Aiche <[email protected]>3653689c41e8cc030c7f6648398d095823f5bf85 authored about 10 years ago by Hannes Roest <[email protected]>
[FEATURE] precursor scoring
ceacc013454b87ee293da41a99b71346ec2371b9 authored about 10 years ago by Stephan Aiche <[email protected]>d43c05838f6b068d00db77d6ff16c0b8934c93d7 authored about 10 years ago by Hannes Roest <[email protected]>
bbfbceb31010558465213049b75ce8621d90f2fb authored about 10 years ago by Hannes Roest <[email protected]>
- allows to chain multiple consumers
3b56abb63dd514ea3cde0f6119cf171f516dc588 authored about 10 years ago by Hannes Roest <[email protected]>ac61482732a202a5214a397d8b8a814d74fe6c7c authored about 10 years ago by Stephan Aiche <[email protected]>
0722b7e07a3d177b290b9c2d4b54a6da8107712a authored about 10 years ago by Stephan Aiche <[email protected]>
6262deb1c2a5892eecdace9965b97332b196cbd7 authored about 10 years ago by Stephan Aiche <[email protected]>
[FIX] check for invalid charge ranges in search engine adapters (see #963)
e9147e9e01abad8af7a24fa9abdef92e30364046 authored about 10 years ago by Stephan Aiche <[email protected]>02369e3723e6ea68cb0968d9d4ff5015eddf9c99 authored about 10 years ago by Stephan Aiche <[email protected]>
29723353c42c501e1c1060da11e1a7dcdaa04850 authored about 10 years ago by Stephan Aiche <[email protected]>
8990c92127b83a895168747cbeb638bce32048e7 authored about 10 years ago by Stephan Aiche <[email protected]>
* switched from int to String for channel name for coming support of TMT 10plex
* added specif...
625984e1f7fdee95f1ba06d3785ced7d85ceedbd authored about 10 years ago by Stephan Aiche <[email protected]>
0992be41bad2cceda96ee5d17ba3255f085538db authored about 10 years ago by Andreas Simon <[email protected]>
08a709c8f4fb88f7e9e42e5885e75e22db73d86b authored about 10 years ago by Hendrik Weisser <[email protected]>
67d9f5706516d36031d5002679345ff9d579e6ea authored about 10 years ago by Stephan Aiche <[email protected]>
0bb9a6d83970faffc4c748eb49a6455bf3d2e83d authored about 10 years ago by Stephan Aiche <[email protected]>
452057bd32b712f6c508cfc126a1b317b524335d authored about 10 years ago by Hendrik Weisser <[email protected]>
d9ea5549f5c34ffb1856205ee9d432c2e0d797ca authored about 10 years ago by Stephan Aiche <[email protected]>
16db46e75edfc04929a008afa727eb1e3bb71a09 authored about 10 years ago by Hannes Roest <[email protected]>
[FIX] QCCalculator now computes TIC only on MS1 spectra (fixes #96)
62ebf6fc19ea4f4bd3dbd4818e571b3642a26b32 authored about 10 years ago by Stephan Aiche <[email protected]>fa69cb828e4ee903991b173ed0861bc35ae4dde3 authored about 10 years ago by mwalzer <[email protected]>
f48ca97808f5f28f4498368ce4fe1aaa71cfd0f5 authored about 10 years ago by mwalzer <[email protected]>
[FEATURE] pyopenms copyconstr
05c6de47aa98447be83db098f38fe29f06e28fa2 authored about 10 years ago by Stephan Aiche <[email protected]>cb111bf14276d07d866ab2ea659ff3a86ec0c227 authored about 10 years ago by Hannes Roest <[email protected]>
- decoys should have a different peptide group label than targets
c1e895daa2d4389c944a9e6fceb64dbc4a6d9958 authored about 10 years ago by Hannes Roest <[email protected]>4308f5f7d60982ef9f73931b7d0fa914088253b7 authored about 10 years ago by Hannes Roest <[email protected]>
ab61a6bc4a7e90d69cf321c97a04f715f15e75db authored about 10 years ago by Hannes Roest <[email protected]>
e9dc67066a9631e16f1b4ff954a5a92ae3b2ea75 authored about 10 years ago by Hannes Roest <[email protected]>
7d25fd4c6fea0dddc1f5763d0540f5a427ac5a57 authored about 10 years ago by Hannes Roest <[email protected]>
2182bb62a724e62914271900a647a92691a709e0 authored about 10 years ago by lars20070 <[email protected]>
2c8f3480eed9b70b581daae0d9c26dbe7649030c authored about 10 years ago by lars20070 <[email protected]>
a549775e8e023e4393ef077c793d1b7b11ee6447 authored about 10 years ago by lars20070 <[email protected]>
ec3dbfa18f6dd7006008e68b2669740b0d33570c authored about 10 years ago by lars20070 <[email protected]>
66b0601cfde566de6283f464ab95dfa646d56506 authored about 10 years ago by lars20070 <[email protected]>
e7fc5526c0954d9efc6a1548a9cfa7396321fade authored about 10 years ago by lars20070 <[email protected]>
6d78bfccb0d066f3484ea684ad5e9c4b5d0f7a04 authored about 10 years ago by lars20070 <[email protected]>
3f77f037fe2e28855f6a71bd2197fa006f6128a6 authored about 10 years ago by lars20070 <[email protected]>
9a8f00ebf63f6331c29925e4b6fd963e9f6b4e0c authored about 10 years ago by Hendrik Weisser <[email protected]>
61a28ecd9c5a6d1d35e2c4b213b0438d80dccd93 authored about 10 years ago by Hendrik Weisser <[email protected]>
423b55df3242325515565c4cc0a2872ddad8b71e authored about 10 years ago by lars20070 <[email protected]>
9ce1950b1c339c0482b74d51f3e963295e9cdc00 authored about 10 years ago by lars20070 <[email protected]>
184c36b0cc4ea9102404325df5c697e57d9341c5 authored about 10 years ago by lars20070 <[email protected]>
9e6c5fb898071726838580320d589bf529bc6f74 authored about 10 years ago by lars20070 <[email protected]>
- also make peptide group label accessible from Python
f42bea2ad39f8ffb4d0b2c5e977ef5ca8a33fa75 authored about 10 years ago by Hannes Roest <[email protected]>- to prevent a name clash with the OpenMS PRECONDITION
6611957c0e953ea55baec7f99324545145e0c7c7 authored about 10 years ago by Hannes Roest <[email protected]>69885ef9d86802ddde76cfa34f9a563c3b97adb5 authored about 10 years ago by Hannes Roest <[email protected]>
a3562acae4324897b8f192ab1e60fb1c88a27770 authored about 10 years ago by lars20070 <[email protected]>
3aafdf17f956ac2cd5af02b2b3ad52a729f91661 authored about 10 years ago by lars20070 <[email protected]>
[FIX] disallow concurrent access to the static PRNG (fixes #956)
e58fca531ce7cbda233b92cc28e6203e14b5346a authored about 10 years ago by Stephan Aiche <[email protected]>[FIX] xml escape in mzML handler
01f4dbc7b6ce95d973fd72dbbe75cb5fa6ced355 authored about 10 years ago by Stephan Aiche <[email protected]>4c88f674bc2d0f447e927b27c97fdc02501e90c7 authored about 10 years ago by lars20070 <[email protected]>
cdcb7ce7c133d4f4467f0cbc925f0e7f240c5a1a authored about 10 years ago by lars20070 <[email protected]>
d65e502338e8957369f728a1f6b7fca433bc0e14 authored about 10 years ago by lars20070 <[email protected]>
f356821b46cc5e95789fc92a328ed9f4b6c31e25 authored about 10 years ago by lars20070 <[email protected]>
1beac055ed5b8f99e94dd40bbaf4e25f45991a3a authored about 10 years ago by lars20070 <[email protected]>
37a88d5f9d4d8561a4b68bf7309bb1d83d474f92 authored about 10 years ago by Hannes Roest <[email protected]>
- otherwise the same random number might be produce twice which could
lead to all kinds of apo...
0d8524ed02b39d750a4465fe6b37dcca34319f1b authored about 10 years ago by Hannes Roest <[email protected]>
- fix all direct string writing in MzMLHandler<MapType>::writeHeader_
with writeXMLEscape
modified: ../src/topp/MSGFPlusAdapter.cpp
0b4e0198980b855b04e783ac1dee3e0ac500235f authored about 10 years ago by Petra Gutenbrunner <[email protected]>Fix/xml escape
4c7512994bc5ad8a2e499a4d9495463d5cd29857 authored about 10 years ago by Hannes Roest <[email protected]>Feature/traml heavylight
45b20724cc9b19c4c22af5932bc3476e49d1b2c5 authored about 10 years ago by Hannes Roest <[email protected]>06068e2c341d219072c699a2ea3ce199f80fec96 authored about 10 years ago by lars20070 <[email protected]>
d4b0b8103b85d974e210c4337df5240ca0254104 authored about 10 years ago by Hannes Roest <[email protected]>
4c54109ac9388ff691305463b1017e22fb881f0f authored about 10 years ago by Hannes Roest <[email protected]>
da8631d622c75c4baec0a8a74295255ebb862530 authored about 10 years ago by Hannes Roest <[email protected]>
- adopt tests to reflect changes made in TransitionTSVReader
7608c47b3a64595d1aa72aa3c3d456fe65215208 authored about 10 years ago by Hannes Roest <[email protected]>
- change headers to include PeptideGroupLabel and LabelType (remove
GroupLabel which was ambig...
5679d3b703bf449581f1e822093bc3b616599f2f authored about 10 years ago by Andreas Simon <[email protected]>
[API,PYOPENMS] add setOptions method for FileHandler
8b68056bb5f939e18a9790d7b639ec559b77fc39 authored about 10 years ago by Stephan Aiche <[email protected]>e1b260278eda39b5727fde1ae381fde87636120d authored about 10 years ago by Hannes Roest <[email protected]>
aa3d9ae01ea7e8dd3ad6600053c9fbdc078ff642 authored about 10 years ago by Hannes Roest <[email protected]>
5167268d42383b4042d10e35d372550bb3abb958 authored about 10 years ago by Hannes Roest <[email protected]>
89377095d8a3d2f6f187776221614df9f44da6a0 authored about 10 years ago by Hannes Roest <[email protected]>
71733d20fd1c1858b24b7bd0923b92a28a0765e2 authored about 10 years ago by Hannes Roest <[email protected]>
90138299c9f77c4d90eb339b928d97054b4bd3b1 authored about 10 years ago by Andreas Simon <[email protected]>
d09ca354d8c5b61cabca5ba52192046c29b1e6ad authored about 10 years ago by mwalzer <[email protected]>
276cea2ce6ab8c90449649d2a45a1b022f849147 authored about 10 years ago by mwalzer <[email protected]>
4ba910aa4515e91e602c73cbdb73ba5ae41848d7 authored about 10 years ago by mwalzer <[email protected]>
df9fa2048f5131441a6cadc0aaffeadae7cfdd16 authored about 10 years ago by mwalzer <[email protected]>
c111d0d44da4ff054d74749d9de44fc903d499d9 authored about 10 years ago by mwalzer <[email protected]>
fixed, broke spectrumidentificationresult - see FIXMEs
0c48dbabd631d907758d119130332051d689543b authored about 10 years ago by mwalzer <[email protected]>and some TODO comments - due to urgent workplace shift
4dc6651e61172f37a3b1bd1e99a49f866a49dd86 authored about 10 years ago by mwalzer <[email protected]>