Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/OpenMS/OpenMS

The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS

Bump contrib from `62f0359` to `1240564` (#6810)

Bumps [contrib](https://github.com/OpenMS/contrib) from `62f0359` to `1240564`.
- [Release note...

f679698f194834889d4018463f005af71696cee4 authored over 1 year ago by dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Bump src/pyOpenMS/pyopenms-docs from `f3264f9` to `19d3537` (#6809)

Bumps [src/pyOpenMS/pyopenms-docs](https://github.com/OpenMS/pyopenms-docs) from `f3264f9` to `1...

3f5c6e2eac23e993476011a26fe8343bbad3291f authored over 1 year ago by dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Update dependabot.yml (#6808)

6fcf3d3d6b93ffcd0e5273dfc0606f41c4534bc4 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update dependabot.yml

df54574b9595ee1f7bf6d034bea997e7c0e47a06 authored over 1 year ago by Timo Sachsenberg <[email protected]>
moved to .github folder

f370b170ef74b29ff6a52a8f86a1834bcd4899e3 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Create .github/dependabot.yml (#6807)

47b855dcc0cddcd2280a43ed9b0cb86b1c06acad authored over 1 year ago by Timo Sachsenberg <[email protected]>
update thirdparty (#6806)

8ddcbaf212c245fe744e5d30347cb2bf8751833a authored over 1 year ago by Timo Sachsenberg <[email protected]>
SVMPrediction (#6805)

d661898f25aceeb16ba9bd7ba18e4e3bfc6dbbc7 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

d679a4a4936a1fe289048d6f090f9fcc9c44b7d0 authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed memory leaks in RibonucleotideDB class

3d7140b7f47a849715eb8f94e11e6cbbce25d9c3 authored over 1 year ago by Samuel Wein <[email protected]>
Update CometAdapter.cpp (#6802)

88a34cba71dac260c9900593f22ae4784198176e authored over 1 year ago by Timo Sachsenberg <[email protected]>
fix memory leak in ElementDB (when overwriting existing elements) and… (#6799)

* fix memory leak in ElementDB (when overwriting existing elements) and make it more robust agai...

92d414e61fe584b05f6cf5548337798b014e9c1a authored over 1 year ago by Chris Bielow <[email protected]>
Update vcpkg.json (#6801)

7a6e70eccf763d085919b5f3d543e8be1e50a3aa authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update vcpkg.json (#6800)

636fcfb9e6da27d8c7d79326f498b0b275d8619e authored over 1 year ago by Timo Sachsenberg <[email protected]>
fix memory leak DeconvolvedSpectrum

ae90f23670fa58096c1538efb09781577569f5fd authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

c1e95236c35d22aaa804966694d652db081368fa authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fix regression

9761f2906ae23f7bafaa1863f4da1fed535a3673 authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed bug in fileinfo

b623c5b44404a852a269a88c94bdda39d94d1654 authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed MaRaCluster Adapter

93507d76e56d575900cee482b5c5bb7532edd142 authored over 1 year ago by Samuel Wein <[email protected]>
Update ModifiedPeptideGenerator.pxd (#6798)

f1f580d1592f3c6acff3554fc3ca3362a5ae162d authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update ModifiedPeptideGenerator.pxd

81eb197a6e6a1785a826099c8f7b4d58972bdf7e authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update ModifiedPeptideGenerator.pxd

fece5c528a537aa023012dd913ed5e9677366db3 authored over 1 year ago by Timo Sachsenberg <[email protected]>
fixes

05ac115f3ff3bfb9cf5624ba6200e131bb4f8387 authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed issue with fileMerger not getting the correct output type

77cb8169e1e70ae9e9c5dc5b5d23cebdf05ccec8 authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

246a73db20035508ecc023cfdb6cd7b67d2f291d authored over 1 year ago by Samuel Wein <[email protected]>
fix tutorial bug

1648c1cccb64c1f94fce03ca597a06137a55f935 authored over 1 year ago by Samuel Wein <[email protected]>
[fix] more test fixes

51b1ef8e6293d1972b4c1b2f88634588039a119d authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6793 from cbielow/tv_fixgoto

TOPPView: fix goto dialogs

febfa0441bf149ba67f43d77266881f0b6d6e302 authored over 1 year ago by Chris Bielow <[email protected]>
[fix] fix tests

cc601d467a8c1979d3783a92554b9b4d1d70f19a authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6482 from poshul/feature/modomicsJSON

Feature/modomics json

5ccab49fa98806b374febdb4dde3c7bcc1f1ebf5 authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'develop' into feature/modomicsJSON

02a0765538e2cf4d401d980e5a0f40b1a7b9a2ab authored over 1 year ago by Samuel Wein <[email protected]>
Update RibonucleotideDB.cpp

4312d0f9acb4b2746edf58519b2be43cee0a1c1b authored over 1 year ago by Samuel Wein <[email protected]>
fix test errors

64da798f5a44dec8abcc55250ea68ba0c193a30d authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed calls to old bool syntax for fileHandler

050f120c25feec8d54844b1eb6273caced67b4d0 authored over 1 year ago by Samuel Wein <[email protected]>
some cleanup

2c0b4dc38b4952a140b03b928f5d4d9f2a35f2d8 authored over 1 year ago by Samuel Wein <[email protected]>
update THIRDPARTY

17637fac4ef3ab38063469210f1d9c975b234cbc authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed capitalization of storeIdentifications

a4f7eaba92f1add8111f0c5a994a4333371fe152 authored over 1 year ago by Samuel Wein <[email protected]>
Removed bool returns from fileHandler, replaced with throws

c84ee8ae947db3815d9c5aa6e23aa597215ad0a5 authored over 1 year ago by Samuel Wein <[email protected]>
fix bug (operate on wrong range)

15006992331c8848c5f2c3c6ce6d68de43351bbd authored over 1 year ago by Chris Bielow <[email protected]>
fix compile error

4b19b15b4c4e0bb32134a99b9b5b49c4ebd03e0e authored over 1 year ago by Chris Bielow <[email protected]>
add missing typename

5cd095ccbd4f7c8794cc9348d218ddcfb93df32f authored over 1 year ago by Chris Bielow <[email protected]>
fix bug: wrong labels/swapped RT/mz dimensions in 2d GoTo dialogs.

c6624bf265ce1192ab9f411d82bbcb784f3b9dcc authored over 1 year ago by Chris Bielow <[email protected]>
add new method for minimal range in each dimension

9c52b487a1fa93c2e6a110dbf075dfbe29701166 authored over 1 year ago by Chris Bielow <[email protected]>
fix possible bug

40075d85a2f4d55081d583a69597f83d07e4fcbf authored over 1 year ago by Chris Bielow <[email protected]>
support shrinking to center point

d8661a1b3a43f56b3fa0404ab0c98d7a505abf3e authored over 1 year ago by Chris Bielow <[email protected]>
add extend support

f5e47fadc62f6c30919544684bdc2b64e0167992 authored over 1 year ago by Chris Bielow <[email protected]>
FIX knime fix_deps variable

9f4c98476dbb4d087db74ab15f1edac662f9d8b2 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update informatik url

5cdc72b5515b3bf97934c6f66a3e697abe86fdff authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

003a248bafadd6a966a2e715b506c1088873ad4a authored over 1 year ago by Julianus Pfeuffer <[email protected]>
use local R lib knime_tests.yml

1d181ea6bb67e329981ad2fc59608417bd3d2792 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

9d7e880fdfe94a434d367d40983c09fcbe12603f authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

6e10caac6261d8e2758366ca1d9e70fc2d8d908b authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

a6cfdfdadaeff434639fb4cc9b48006026674b14 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Create knime_tests.yml

558070e85eb240336ab277d1aa3443b106c46c5e authored over 1 year ago by Julianus Pfeuffer <[email protected]>
try extended regex sed

56c6fa911625be46103ec19ba88653b6ac6d4447 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
fix memory leaks (#6792)

* fix memory leak in elementsdb

* fix FLASHDeconv test memory leak

* another test

* som...

e1fb33c9058358417c3cd4db03c21cdc81fbd0d8 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update containerdeploy.yml

edb12773cb7e7c9a8cc301a13eb18aa590a8102d authored over 1 year ago by Julianus Pfeuffer <[email protected]>
try singularity directly on runner

9a34c6d5fe251024c54e67b2b09669290d0a207d authored over 1 year ago by Julianus Pfeuffer <[email protected]>
move MzMLFile includes to where they are actually still needed and comment

c3cfc8e06823ff59f8d4297d3806af14c1be1d6c authored over 1 year ago by Samuel Wein <[email protected]>
fixed extensions for external tool tests, cleaned up docstrings in FileHandler

67949daa0ea38600a1ee07bf6543ec010245b192 authored over 1 year ago by Samuel Wein <[email protected]>
fixed extensions for external tool tests, cleaned up docstrings in FileHandler

e76b892f006c56663832c46f15ef9781d2759328 authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6791 from OpenMS/feature/setGlobalLogLevel

[FEATURE] allow setting global log level easily.

dec7622ffdf93536e5fac330223fe5227132a4e7 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
[fix] fixed bug in tutorials, cleaned up Filehandler and made sure docs were updated. Updated FileHandler_test to deal with proper exception checking

1c346961a677e3460ada2ef847d4e31a0c42eda4 authored over 1 year ago by Samuel Wein <[email protected]>
forgot cimports

25edff2366b0b3c5d6de47684dcd9e72ce8d37cf authored over 1 year ago by jpfeuffer <[email protected]>
fix tests

e38e622b12636944a0475544cae5824365f984c6 authored over 1 year ago by jpfeuffer <[email protected]>
[FEATURE] allow setting global log level easily.

dde2b58450923f57b3c5033266389fc1e6907ef4 authored over 1 year ago by jpfeuffer <[email protected]>
finished conversion

66f6b101e950190d85654574657105dae62bf8b0 authored over 1 year ago by Samuel Wein <[email protected]>
more conversions, added overload to ClassTest to allow creation of temp files with specified extensions

0510b1bcc9add345ec07a31af776f482be2a3981 authored over 1 year ago by Samuel Wein <[email protected]>
more

9d82b4fe89f44083f1cf4bc9310d763e731b9139 authored over 1 year ago by Samuel Wein <[email protected]>
lots more conversion

ae351037b22b3fe507b1e4cb0b6ac7e08bc7e457 authored over 1 year ago by Samuel Wein <[email protected]>
fix typo in Tutorial

7e957b4f47bbcda0e2aca14595967a05130772e3 authored over 1 year ago by Samuel Wein <[email protected]>
[fix] bug in tutorial

9e3c6865841b9ec909e76189cd31ba09cd382ddf authored over 1 year ago by Samuel Wein <[email protected]>
more conversion

e8d1196fa7161c24eecb64db6ad8081016098312 authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

e20a43252268b32b1c6384f205ea30536ae936a1 authored over 1 year ago by Samuel Wein <[email protected]>
get rid of force_type nonsense

8ac4ed8c4ff7366f03ff0fe89fb140d8ca2dd66e authored over 1 year ago by Samuel Wein <[email protected]>
Major refactor of TOPP tests to get rid of all the .tmp nonsense

7f645f57ed55ee3f33356a5bd3147de2ccfd0a8c authored over 1 year ago by Samuel Wein <[email protected]>
add back sudo to singularity build?

69468f94d6dc46b048703010137f106b24e54004 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
deal with some of the .tmp in TOPP tests

1cc78f9cf11b16031ca19db4ab4a2a2edf4e6155 authored over 1 year ago by Samuel Wein <[email protected]>
more refactoring

05c5f4f94c560c69dcb56775f49513e7e54b3e14 authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'Feature/GenericFileLoad' of ssh://github.com/poshul/OpenMS into Feature/GenericFileLoad

7d4bac8ab6919cf7d2144e9ee778fca1baad01eb authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

353e92f376931a5977cbf2ab5c90022d1f63bc5c authored over 1 year ago by Samuel Wein <[email protected]>
mre

9851de26059eaf9cd01a0a6614a98f7dd16c8ba5 authored over 1 year ago by Samuel Wein <[email protected]>
even more

e460658faf2e4c60b66be68856de9fa700658e93 authored over 1 year ago by Samuel Wein <[email protected]>
more conversions

6082f4af846d06cc5a620dc9eff8612fa4e0a53e authored over 1 year ago by Samuel Wein <[email protected]>
a bunch more conversions

4a1a2aeef6fb92aab8199a424fdf477a93127ae1 authored over 1 year ago by Samuel Wein <[email protected]>
refactor a bunch more

62bee63385556f1efec160ccd8922755b366a1aa authored over 1 year ago by Samuel Wein <[email protected]>
Lots of refactoring

43a44b5710206faed182188e8eb6db6b19bc15f3 authored over 1 year ago by Samuel Wein <[email protected]>
Add hasIndex to MZMLFile, converted utorial_FileIO.cpp

d404c7eda1c3a9a4b5663d8e067f6e6de12bd34b authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6783 from OpenMS/simpler_test_macro

use the simpler bool version

8473b01e507d418ca4ab8e8f8c9ee2cf12cde0f0 authored over 1 year ago by Timo Sachsenberg <[email protected]>
[fix] fix bug in idmapper

8207ce6124f1615af393ff2e4520221884351230 authored over 1 year ago by Samuel Wein <[email protected]>
converted QCCalc and added StoreQC

7f0f27913d4a6210c4385bad1cbca32afc2bf408 authored over 1 year ago by Samuel Wein <[email protected]>
Convert MzMLSplitter

843ec6d3b0956295f8c104f46c72e5ae6c549849 authored over 1 year ago by Samuel Wein <[email protected]>
Convert IDSplitter, add StoreIdentifications to FileHandler

deb9923f4e138654908c0a17ebf511000a00e670 authored over 1 year ago by Samuel Wein <[email protected]>
Convert ERPairFinder

10b7f4165e8d81f1cf8d4e73273b0f2bf2dc3ae0 authored over 1 year ago by Samuel Wein <[email protected]>
Convert SeedListGenerator

ff87250621e90740da86816cc45c08621cad0efd authored over 1 year ago by Samuel Wein <[email protected]>
Convert PrecursorIonSelection

82133b3f5df68f0143a7d7134b9afa6e80d8ec04 authored over 1 year ago by Samuel Wein <[email protected]>
added loadTransitions to handler, converted MRMMapper

e11c2bbe54c723b66d24323de01bf91ad8d6b2b4 authored over 1 year ago by Samuel Wein <[email protected]>
add transformationDescriptions to FileHandler, convert MapAlignerPoseClustering

183d7b194fe61ca411239640dfc0d56cfa04695d authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed some bugs

fd72ad82b3b8c62bc5e9a973771d35643e0f4034 authored over 1 year ago by Samuel Wein <[email protected]>
add allowed_type and force_type to all the other FileHandler load and store functions, cleaned up

4ca6ada61f84a0f56a03ee9e6e3749ddc9047b28 authored over 1 year ago by Samuel Wein <[email protected]>