Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/OpenMS/OpenMS

The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS

fix for clang/gcc

ebac5ca334350107d003c6288cf44a685b13dbce authored about 1 year ago by Chris Bielow <[email protected]>
fix some compile errors for Win and minor optimizations

e166dac57e76890546fc88127d64f7f6021163e4 authored about 1 year ago by Chris Bielow <[email protected]>
reverse logic of #6877, to allow pre-configured OpenMS source builds to run without weird error messages

30e5def115eea2f71b5703db7596c61a2a6ffb3f authored about 1 year ago by Chris Bielow <[email protected]>
Merge branch 'develop' of https://github.com/OpenMS/OpenMS into HEAD

876c38b8f2dc23d25f88ecbcf07aa56d8bc9601d authored about 1 year ago by Chris Bielow <[email protected]>
Generate thirdparty lib licenses

c90e176283974961439f82951ed603f96a589ec9 authored about 1 year ago by Julianus Pfeuffer <[email protected]>
Cleanup pyopenms cmake

a31897c1bbd2f9bcd806b1bd27ae70f546cb9008 authored about 1 year ago by Julianus Pfeuffer <[email protected]>
Cleanup pyopenms tree

220eba94ef92218d2f0b95567529cdd549b78a69 authored about 1 year ago by Julianus Pfeuffer <[email protected]>
Cleanup and make thirdparty executables for KNIME optional.

34ebebf5799b03a581d994364d6da5aaff28dd2c authored about 1 year ago by Julianus Pfeuffer <[email protected]>
add suffix to package names on macOS for different archs

e6ace18f7684caaa11b642d88ab06b3b99b4cc5e authored about 1 year ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6966 from OpenMS/revert-6914-fix_floatingpoint_IsobaricQuant

Revert "Update IsobaricQuantifier.cpp"

0ceb54752016ab53f663d47d4b2802af312bfa87 authored about 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #6965 from OpenMS/timosachsenberg-patch-1

Update openms-ci.yml

a488d28a77c88d3c5c4d507238a8ab0c2600f790 authored about 1 year ago by Julianus Pfeuffer <[email protected]>
5.15.2 is the latest available

147e8c997c693a9ee1b688b0c4392042f871671c authored about 1 year ago by Julianus Pfeuffer <[email protected]>
try 5.10.8

96cae03812ba895a94dcb0213ffff5d6cda16e4c authored about 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms-ci.yml

90e3e1c1e5fca85dc2a2b82cc7acbb1467a2e12a authored about 1 year ago by Julianus Pfeuffer <[email protected]>
Update .github/workflows/openms-ci.yml

72001bf55d79965c58b1d5ecaa4bb3c308141ff4 authored about 1 year ago by Timo Sachsenberg <[email protected]>
Revert "Update IsobaricQuantifier.cpp"

2cff82ae766ac4bc040bf405aa480e1a15a578a7 authored about 1 year ago by Chris Bielow <[email protected]>
Update openms-ci.yml

86dee44f808452dd23f93c6d56c6ae7a2f323206 authored about 1 year ago by Timo Sachsenberg <[email protected]>
Update openms-ci.yml

bc54751cb338ff0a7508b602c7fcf72209588cef authored about 1 year ago by Timo Sachsenberg <[email protected]>
Update openms-ci.yml

c27ab8d14048f2704e1e32d7ef4486efc8bf76bf authored about 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #6960 from cbielow/fix_FMA_apple

fixes failing tests on Mac Silicon

c4865520e50fc74fdaee11e52721609f9651960a authored about 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #6961 from OpenMS/jpfeuffer-patch-1

Unify action trigger for container and wheels

ab1a0b2828d0c15db39f6c63243eecdfae1ae9fd authored about 1 year ago by Timo Sachsenberg <[email protected]>
Unify action trigger for container and wheels

002c23f68c0f9fff9f0ed52e70c76730cb51581d authored about 1 year ago by Julianus Pfeuffer <[email protected]>
apply to Clang in general, not only Apple

0726f7e50b6803673d8928fdbda908caaa4d5178 authored about 1 year ago by Chris Bielow <[email protected]>
fixes https://github.com/OpenMS/OpenMS/issues/6959

9113cdfa9118484d5ef50cf692049bf1ab08c046 authored over 1 year ago by Chris Bielow <[email protected]>
Update update_version_numbers.yml

ab14cfb3882dc1416bce1a066cca0f6a05c34906 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6739 from OpenMS/update_package_number

[ByGHAction] Updated OpenMS package version numbers

e8aac4671c92c3c0429596b9cb6168d96f5c91fb authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update CHANGELOG

3d93e81960711bda3e792d9102ec3d6a991fb11a authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Updated OpenMS package version number

05ce6aa584a22b8e3148b82fec539d042f51440a authored over 1 year ago by jpfeuffer <[email protected]>
Update update_version_numbers.yml

2a2d60f9e6a8ef4fd239eee50542fe6a18d8b1fb authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update update_version_numbers.yml

f61ab5d8936dd8b23804513bfaaf588836e9e7b8 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update update_version_numbers.yml

9add4fbd83a12fdf23ef12ae483a33d2dd0196df authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update update_version_numbers.yml

76a36c1c501765d503763975f0cdc9caf9c7720d authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6957 from OpenMS/release/3.0.0

Merge back Release/3.0.0

b82f97607e60dcd3471f9fda66fd678fd00f6a54 authored over 1 year ago by Timo Sachsenberg <[email protected]>
[nop] fix some whitespace complaints from codefactor

b703df5364ce1887704090ac839522bdb67a25af authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

444ee9789b4815c66b1e7c851441111629c3d6cc authored over 1 year ago by Samuel Wein <[email protected]>
add consensus writing support for OMS to FileHandler

fac73312d60581c9f59cc1c2bdee3aa43597a5d9 authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'Feature/GenericFileLoad' of github.com:poshul/OpenMS into poshul-Feature/GenericFileLoad

d8600bfca8fc7d84b9e73b9d3c19f04a825eb52a authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6950 from SGSSGene/fix/json_reader_output_files_shall_be_string

fix: json reader entries for output files, should be strings

2e88d779049f03506d1abd27d146693d29cf9708 authored over 1 year ago by Samuel Wein <[email protected]>
Bump THIRDPARTY from `e215209` to `0dda83f`

Bumps [THIRDPARTY](https://github.com/OpenMS/THIRDPARTY) from `e215209` to `0dda83f`.
- [Release...

3be8710c26890df17a3aac4ad32c4f6d825efe56 authored over 1 year ago by dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Merge branch 'develop' into fix/json_reader_output_files_shall_be_string

77fa3bef7d14d885532b528be906cd98dd542d02 authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6951 from OpenMS/SimpleSVM_test_speedup

SimpleSVM test speedup

e829f8bbcba9ea070b71f33a5d508a51b12c4003 authored over 1 year ago by Timo Sachsenberg <[email protected]>
SimpleSVM_test_speedup

4d17dad348c6e8ea2809031bfee351340bfe76ff authored over 1 year ago by Timo Sachsenberg <[email protected]>
fix: pass through 'is_executable' on input files

267e798501a449159da8c74d882cd027983a15a4 authored over 1 year ago by Simon Gene Gottlieb <[email protected]>
apply lint suggestion

ec78b0ac81ac17a36f434300d926e34de7473f6f authored over 1 year ago by Simon Gene Gottlieb <[email protected]>
feat| JSON-ini reader, evaluate is_executable tag, to allow file and string as input

c992dca3ab142f92a5fa43e822efb467afcd90eb authored over 1 year ago by Simon Gene Gottlieb <[email protected]>
test: fix JSON-ini reader based tool tests

83513b816da59485b2f90616670d7c7b11e8b042 authored over 1 year ago by Simon Gene Gottlieb <[email protected]>
test: add test to check for correct input file type

08be467dc60e86ca2e86350d0ad8f1084aa44d58 authored over 1 year ago by Simon Gene Gottlieb <[email protected]>
Satisfy linter

d604968b4d83a02b68ac50b62ecec64e243e2087 authored over 1 year ago by Simon Gene Gottlieb <[email protected]>
fix: json reader entries for output files, should be strings

884ae29fe9337e022922aa447904ebc58a238373 authored over 1 year ago by Simon Gene Gottlieb <[email protected]>
Merge pull request #6949 from OpenMS/develop

update release branch

be787e9c0457c5d80ff04eb8464151b9d65df8a5 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Release/3.0.0 (#6948)

* change context

* change context

* change context

* change context

* change context...

4aab7fcbda9d0c6600e51846081610ed8c169014 authored over 1 year ago by Timo Sachsenberg <[email protected]>
feat: :sparkles: Added ion mobility possibility for dataframe (#6941)

* feat: :sparkles: Added ion mobility possibility for dataframe

* Update MSExperiment.h

* ...

82e0001ebf9ce81fc3d1ad2dea73d55ac98fbb19 authored over 1 year ago by Pierre Snell <[email protected]>
Merge pull request #6947 from OpenMS/jpfeuffer-patch-7

Update docs with warning in FloatDataArray.pyx

b74ca080a2cbd1fb487d69e5d2760941ca8164b9 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update docs with warning in FloatDataArray.pyx

f0c72775a2abffa7059d3630d5abe802cc9b2dfe authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6877 from OpenMS/feat/brewVcpkgCMake

[FEATURE] Make CMake work with coin from brew. Complete the vcpkg recipe.

a6593a3015ca3295d0767dd3cb10e30eac00e03f authored over 1 year ago by Julianus Pfeuffer <[email protected]>
comment fix conditional find pkg

e03ab386878539e1fd1266fd5cdfb33d40726a13 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
fix conditional find pkg

65c5ca8837d83fc751898f75b6bff2f43f2ea707 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
typo

6d8bd901cf4e565841a294786d9ebb3c26811622 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
fix coin include dir cmake logic

583e672c889fe916b5062f44e2211a6d89c131bb authored over 1 year ago by Julianus Pfeuffer <[email protected]>
last fixes for vcpkg.

- allow coin includes in different subdir
- remove boost test (just because)
- list subset of boo...

489bc6a7d10fa86db23e7db70aa17aa6da6f3dbd authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

8fdce656a6ac7b568b3a41d51043c0c51b7f9835 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

806aa18fa7d4a58172d3e5fe76ad0da8ba20dd2f authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update CHANGELOG_PARAMS

ceb75536d96af28b9ad1acfe5e99dd78f6b97aa6 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update cmake in pyopenms-wheels.yml

fixes #6945

a7aa2b72f181a8b0b44734e8c8aae2ae45ac155d authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6943 from cbielow/r3.0.0_up

update Release3.0.0

45fd32d6c7362614578944e7f8bc265b8349aa1a authored over 1 year ago by Timo Sachsenberg <[email protected]>
update mascot test

e4225c20dad9b7b1324729de72b823088978d0b6 authored over 1 year ago by timosachsenberg <[email protected]>
Update doc/doxygen/install/install-macs.doxygen

Co-authored-by: Timo Sachsenberg <[email protected]>

14111badce1b681e4d525995096b5b1d0aa3862d authored over 1 year ago by Chris Bielow <[email protected]>
fix minimal cmake version

dbec18ed594c49916a0b0117f08d324b31da5220 authored over 1 year ago by Chris Bielow <[email protected]>
also update LICENSE.md

0a0d93b3b6a0c2060647b293a577b326ae04be93 authored over 1 year ago by Chris Bielow <[email protected]>
Merge pull request #6938 from OpenMS/fix/mascot

update mascot test

ebbc8867226414655e46acfc45a90c2827950483 authored over 1 year ago by Timo Sachsenberg <[email protected]>
update mascot test

1f286fb438bdc89909595ff20c6dea9c3ecb3a6c authored over 1 year ago by timosachsenberg <[email protected]>
Merge pull request #6936 from poshul/removetutorial

Remove pdf tutorial from targets

4466d30ad2df63c75ae8b458c0bfedbde9d79f8a authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6935 from cbielow/feat_external_libs

fix minimal cmake version (3.24)

ae7d4b8624b46d05811b521b207cc9d4caa7985f authored over 1 year ago by Chris Bielow <[email protected]>
Update doc/doxygen/install/install-macs.doxygen

Co-authored-by: Timo Sachsenberg <[email protected]>

73ba39f5ac3a5162d8c777e7b939bbf3d28de5dc authored over 1 year ago by Chris Bielow <[email protected]>
Merge remote-tracking branch 'upstream/develop' into removetutorial

e8e2c12d18b32fb3ac8daf9f544f7e7c2ec75a95 authored over 1 year ago by Samuel Wein <[email protected]>
remove refs to tutorial

96b9c58ce77018c7341cb7ae3fbe7706b8f3cab7 authored over 1 year ago by Samuel Wein <[email protected]>
fix minimal cmake version

83d12db03d46795c20258b0fd6cf4af87cfc57d5 authored over 1 year ago by Chris Bielow <[email protected]>
remove old tutorial

3ea6d08b80be12f01cf9464962dc07d118bb397a authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6933 from OpenMS/Remove-dependency-on-newtxtext

Update refman_overwrite.tex.in

f955639145af8898211549f6b1f97b785c660b43 authored over 1 year ago by Samuel Wein <[email protected]>
Update refman_overwrite.tex.in

We don't need to define Bbbk any more and newtxtext is not in the livetex-basic package, so lets...

bcb282f25e8285a1ee4cfcef816ab6b4c7f1c54b authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6929 from OpenMS/license_year

also update LICENSE.md

501574467b0744215d5228c802c44462446be6fe authored over 1 year ago by Chris Bielow <[email protected]>
Merge branch 'develop' into license_year

870b643feadb159689a94d939b6b6f476ce9807f authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6930 from OpenMS/develop

update release RC from develop

ff90f0466256f131c20c6d813d451ba923aadea9 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6928 from cbielow/feat_external_libs

Support external libs (JSON, SQLiteCpp)

270072ef1fad3d0f9abfed109d92440c20c06e4d authored over 1 year ago by Chris Bielow <[email protected]>
also update LICENSE.md

82cb9b0e7ed17604242560685c0dab61fba14bd6 authored over 1 year ago by Chris Bielow <[email protected]>
fix find_package to propagate results to parent; a bit more verbosity

7289c783a34ce646a003796a1a1893a2755b1465 authored over 1 year ago by Chris Bielow <[email protected]>
minor cleanup

eca336ae22a5671b41fef1c8bd9c1811fd247970 authored over 1 year ago by Chris Bielow <[email protected]>
allow external JSON target / update nlohmann::json to proper lib

aabdf33421a71fcd97285545396adc3ee9f88182 authored over 1 year ago by Chris Bielow <[email protected]>
fix license year

b84a7f80dc9b9f820dd33d138d35fe7190ebec6c authored over 1 year ago by Chris Bielow <[email protected]>
Merge pull request #6926 from OpenMS/update_year_number

[ByGitAction] Updated year number in the header of files

947b5b966299300049cb6b9f9239b2462a244480 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Updated year number

3ecd0cee7cb39c1ca3dffda202f7e886cce8c299 authored over 1 year ago by timosachsenberg <[email protected]>
Merge pull request #6925 from OpenMS/timosachsenberg-patch-1

Update update_year_number.yml

ee23b2604fb84ab67338950408c59ad9c7b9bf87 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update update_year_number.yml

5a5d0bd8d532fe644fca0b935c07f6e3bce7bdbe authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #6924 from OpenMS/timosachsenberg-patch-1

Update update_year_number.yml

6c7966c960127b3ade4c4b88a621569d5933986d authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update update_year_number.yml

7237383d9646bb8f45dbd61315aa57a25c72c8ba authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #6921 from OpenMS/run-update-year-number-once-per-year

Update update_year_number.yml

6c018267ab603c2d0c1bc07bf1445fd58c5f5796 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #6920 from OpenMS/jpfeuffer-patch-1

ignore Cython warnings for py 3.8

549e12f2c57476c6d262be12076d31a303f4f032 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update update_year_number.yml

dabda190b93494b5cefbca33a73565dd210bc356 authored over 1 year ago by Timo Sachsenberg <[email protected]>
ignore Cython warnings for py 3.8

6578de567abc4b43cd075eca3366d6116a60f5d3 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Merge remote-tracking branch 'origin/develop' into release/3.0.0

cb71bec5a844fe31d598e9b63a40149b22c34807 authored over 1 year ago by Timo Sachsenberg <[email protected]>