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BioJulia
Bioinformatics and Computational Biology in Julia
Collective -
Host: opensource -
https://opencollective.com/biojulia
- Website: https://biojulia.net
- Code: https://github.com/BioJulia
the man page.
github.com/BioJulia/ragel - d4c50bf113f2cb7dbc47a3f3d36221317dcaf64f authored about 17 years agogithub.com/BioJulia/ragel - 2911a2019dd1a095ce1f1fe99666008ce5f8fb2a authored about 17 years ago
github.com/BioJulia/ragel - 46b3ebf56186b787070cdb3530d1519c5f832e48 authored about 17 years ago
github.com/BioJulia/ragel - 8f6fd5785a7af4b8441ffcd063614ff17fe3a2a7 authored about 17 years ago
github.com/BioJulia/ragel - c56e08d1736ef1141660468fbdc902ea44ff7a8c authored about 17 years ago
github.com/BioJulia/ragel - 6569f5f3a6b82878bb249c4555ea559f7eb93a87 authored about 17 years ago
github.com/BioJulia/ragel - e801ba5d99171cb7dd78c746a0e3b1bc5b01c035 authored about 17 years ago
github.com/BioJulia/ragel - 844716fba1e8667471ae1303b8409504cfd8d5d4 authored about 17 years ago
the two diagrams that need to the updated for 6.0.
github.com/BioJulia/ragel - c6d652a2ed858766551f9c79fb498854383c598e authored about 17 years agogithub.com/BioJulia/ragel - 8b41bd82481ed217d5b9c9975cd300f49e251e1a authored about 17 years ago
github.com/BioJulia/ragel - 8e4fff0ae44b0293215af5201074c775b37d5bf9 authored about 17 years ago
github.com/BioJulia/ragel - 82ca96df5c65b5db8a4fb069248a973dc8a183fa authored about 17 years ago
github.com/BioJulia/ragel - 44eae7b90e8926049e89290203ff4d4fe5623fd7 authored about 17 years ago
github.com/BioJulia/ragel - 3e5b611e2167be35d6b0485d40fab5a437a79ba5 authored about 17 years ago
github.com/BioJulia/ragel - 47af31bf2124b528fadfc9ed08c3e2df7d248f9f authored about 17 years ago
github.com/BioJulia/ragel - a46133def8877ad9e9857a3ae98bfa411e33667f authored about 17 years ago
github.com/BioJulia/ragel - 0608d06e91634eb98ed959c66522de8a57cd9044 authored about 17 years ago
github.com/BioJulia/ragel - a44375d6c97c57cdc1ce153ad3d4039611cb50f3 authored about 17 years ago
github.com/BioJulia/ragel - c39d4e956ddd6c562463ee5422f99835f4b8dace authored about 17 years ago
github.com/BioJulia/ragel - c02be1288e0aba59937fd34c5159aa8ebdc0e839 authored about 17 years ago
github.com/BioJulia/ragel - 35ebce8160cd9bda1ea697ebea3d2e5c442f3931 authored about 17 years ago
char* and about && within ||.
github.com/BioJulia/ragel - f356f9f3181d5e93c6617d5c66d744631ca81fcc authored about 17 years agogithub.com/BioJulia/ragel - 4e8594ac656c9485ee3c1d28737f35ff5fa4fece authored about 17 years ago
github.com/BioJulia/ragel - 1b647197f07af5be8cb0a4a04b012b4deadf3795 authored about 17 years ago
github.com/BioJulia/ragel - 1702e233de19b0408e13a8df4120b242b26d6fe0 authored about 17 years ago
github.com/BioJulia/ragel - 434742cfff05118b1cd1e54cc8539c29c7ac2e26 authored about 17 years ago
Large arrays are now created by copying in the data from smaller arrays using
System.arraycopy()...
that ragel does not compare action text. This tripped up a user.
github.com/BioJulia/ragel - 27970607e0880415da29b89b4cb387c3117c6e0c authored about 17 years agogithub.com/BioJulia/ragel - 6fe99bdf61bcee7f52d9d90535b788b838f4b791 authored about 17 years ago
github.com/BioJulia/ragel - d589296b1c3d577eb4376379160264dae0f94e38 authored over 17 years ago
now require an input file. If standard in is used then we don't have a file
name on which to base...
github.com/BioJulia/ragel - 80bbce810a1421659651afc1211b24b3b5174e15 authored over 17 years ago
github.com/BioJulia/ragel - e6302d14994c10735463b410e8be63b26d75226b authored over 17 years ago
github.com/BioJulia/ragel - 3ab6b2bb5e07a62f5acd8cbf5bfc2a3cf696c015 authored over 17 years ago
github.com/BioJulia/ragel - 3b1e24006d147a6a2a2e14f89fb6b9091d10ece2 authored over 17 years ago
the executable location searching and fork+exec code.
github.com/BioJulia/ragel - cee2765b598813066052c368a0f8ce543ad881ee authored over 17 years agocalls the frontend (itself with the -f option) and the backend.
github.com/BioJulia/ragel - e61ae8bfbd135f2fb6c7cd7667edc0ada69f5a57 authored over 17 years agothe examples makefile.
github.com/BioJulia/ragel - 098a160efe43104f3b2d146d03c195a0b3916daa authored over 17 years agogithub.com/BioJulia/ragel - 1c22fd04707dd3c39f49b171ce9776eaffb54059 authored over 17 years ago
Added a passthrough in the frontend for the backend options.
github.com/BioJulia/ragel - ec6d12f83e8a1b50ace2e954aae74e1fe616f310 authored over 17 years agogithub.com/BioJulia/ragel - e5d757e9185dfc8408038376a93b9cf920f6df04 authored over 17 years ago
github.com/BioJulia/ragel - 7f71f99c9f36c345497c6385b67f289836549500 authored over 17 years ago
argv0 then it is assumed that the path is explicit and the path to the backend
executable should ...
github.com/BioJulia/ragel - aea0c84ecbc686fa376cd6b1a02b4f8d847ff064 authored over 17 years ago
github.com/BioJulia/ragel - f8676dfbdfa3c55e580be3b5b851a291cef93b7e authored over 17 years ago
state is not final when compilation is complete.
github.com/BioJulia/ragel - 3cfb34085fe249ade4c6f9b10c907ac4ab2eb0f2 authored over 17 years agointo a final state that remains final when compilation is complete. Regenerated
the exaction exam...
is no longer needed for genfigs.sh. The genfigs.sh script now uses ragel and
rlgen-dot from the c...
github.com/BioJulia/ragel - 88aa0824b5a445f24faddd7f33ba6c7dc5e94bbc authored over 17 years ago
into the EOF event.
github.com/BioJulia/ragel - 3032242a1dcbae646d9802f7957201b53513ab72 authored over 17 years agoa leaving action/priority into the start state if it is final. If EOF happens
in a state with a l...
github.com/BioJulia/ragel - 88b2123344c8b6b944b1bf08eb7a16f70f081cba authored over 17 years ago
github.com/BioJulia/ragel - 28eb9bbba72cab8c9d77aa6d76106e1ce9f0ca9d authored over 17 years ago
flat table code generators.
github.com/BioJulia/ragel - dd29d4ba0f4cc7de3786726ad2ad232bc01ed9b6 authored over 17 years agoRubyFTabCodeGen.
github.com/BioJulia/ragel - b0ea1c71f7de3ba9bbbd102d12a40229771c370a authored over 17 years agogithub.com/BioJulia/ragel - 82e8f189f8b06811bf6f52b251beea134bba9faf authored over 17 years ago
github.com/BioJulia/ragel - 672ab5add059d57c9181d050290ca244c3240319 authored over 17 years ago
eof pointer.
github.com/BioJulia/ragel - fa7aae7416f8bd4f8765c2fb7390b75cceb1040a authored over 17 years agodriver; a switch statement with fallthrough cases are now used to emulate
gotos.
github.com/BioJulia/ragel - 481c68889c2ff3a4ceaf2b54beae710399605bb5 authored over 17 years ago
states. EOF transitions (present when an EOF targets are present) are now
passed to the backend a...
github.com/BioJulia/ragel - ffbaba66dffbf1e4a850cc30fd80d1aa8b25ae4c authored over 17 years ago
back to the start state in scanners.
github.com/BioJulia/ragel - 51dc48d873416dadc9ded6ff214413ec93ccdf5e authored over 17 years agogithub.com/BioJulia/ragel - 9331691d783a5eb3fb8f6c0adc1741ea31e9d96f authored over 17 years ago
github.com/BioJulia/ragel - 48158586099d8acab15b923ccaddaf9743109846 authored over 17 years ago
checked against eof when the processing loop is broken out of due to p == pe.
If p == eof at this...
github.com/BioJulia/ragel - b8d15ad40d6cf52da0cfded624889c38cfd949a5 authored over 17 years ago
first example it shouldn't contain a special purpose write option like 'noend'.
github.com/BioJulia/ragel - 7370f58d087d426b7f8404339f2d005526ffa0cc authored over 17 years agogithub.com/BioJulia/ragel - 90f05a7573fc8befbfd40282a57a61e160f1fb3e authored over 17 years ago
github.com/BioJulia/ragel - 3c0416a84ff26e68220449c9ff2c0c687bbcaddc authored over 17 years ago
written out during call and return statements immediately before pushing the
current state to the...
github.com/BioJulia/ragel - d240c0e58d2820cdba2db6463c7db274a717fcbf authored over 17 years ago
keyspace an error message is emitted. A paragraph about this was added to the
manual.
write option. This tends to trip people up. Added a basic example which appears
first.
This patch implements -T1 -F0 -F1 and -G0 in the ruby code generator.
Goto-driven code generatio...
github.com/BioJulia/ragel - b18c092f45ac8733c5bb1e7242be6ea85b942a77 authored over 17 years ago
github.com/BioJulia/ragel - 7a42a1522c5d95b7ffeea0680b3b4b767d5c2580 authored over 17 years ago
github.com/BioJulia/ragel - 3f41e5dd3077b4a75b252f1161268ed623484151 authored over 17 years ago
github.com/BioJulia/ragel - 29b9d07ac44f22181c8dbd63c11337d08012ab5b authored over 17 years ago
github.com/BioJulia/ragel - c83166aae40a6c1fba63f1799c94eec899126ee7 authored over 17 years ago
github.com/BioJulia/ragel - efff4f8e50f02ce84a3103c1916d50bea3d5f829 authored over 17 years ago
github.com/BioJulia/ragel - 2b83c2521c28eb926fbc1ca139c5e4df010aec9c authored over 17 years ago
github.com/BioJulia/ragel - ecf544842764e58e3aa14abc84d681ef5a0cb898 authored over 17 years ago
github.com/BioJulia/ragel - 71dd2c69c11b67c6a36421afe8054aa54b4ddf91 authored over 17 years ago
github.com/BioJulia/ragel - 07b091799eee5d78ab4eee262660c4e3878afdef authored over 17 years ago
github.com/BioJulia/ragel - a7a045e4f0da92ee8701af25d814a0abc10b85a2 authored over 17 years ago
github.com/BioJulia/ragel - 368d60bd22d7ccc43dd33fb6029a668f4bad8334 authored over 17 years ago
github.com/BioJulia/ragel - b620ed6842dde4757cd0aec62676e8eaf76eea38 authored over 17 years ago
instantiations and hence no state machine.
github.com/BioJulia/ragel - d04ed47698af479de10efeda3d0828d02f620933 authored over 17 years agogithub.com/BioJulia/ragel - 6faf79632a5ead0891af99a9eaaa154e17b97ec7 authored over 17 years ago
github.com/BioJulia/ragel - a88c7f3b4628b2467f5a3d769f8daa9ec344636b authored over 17 years ago
Added the "variables used by ragel" section.
github.com/BioJulia/ragel - a054adc9a58ca20c30bd2cc0a228c0293eddbfe3 authored over 17 years agogithub.com/BioJulia/ragel - 07162fd2775a3a1c8ceb9640f7ca5b0444eb6e18 authored over 17 years ago
github.com/BioJulia/ragel - c49d844f33a73245b8290f17c83b90eed2b6d26c authored over 17 years ago
github.com/BioJulia/ragel - 6bf0baaaafe3780e29584bf04a8cfdbe0226a4fd authored over 17 years ago
implementation used in the java code generator is imitated using control flow
variables.
github.com/BioJulia/ragel - 72e9db02806a95611f591f1eaeb032ae56c5c155 authored over 17 years ago
github.com/BioJulia/ragel - 4cb18b00babafb4b6cd6de3f571e72d45dfb43c1 authored over 17 years ago
github.com/BioJulia/ragel - ea7f4cf31786805aee12c470e514a5bc676b9b60 authored over 17 years ago
github.com/BioJulia/ragel - 2d438951a2c5f5f1ae9b67020fb5f358dc57e640 authored over 17 years ago