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BioJulia
Bioinformatics and Computational Biology in Julia
Collective -
Host: opensource -
https://opencollective.com/biojulia
- Website: https://biojulia.net
- Code: https://github.com/BioJulia
github.com/BioJulia/ragel - c6e999adb1b87db99da4dc25096eec47796b9c85 authored almost 11 years ago by Adrian Thurston <[email protected]>
Nothing generated for C. In D 'goto case' is written.
github.com/BioJulia/ragel - b1048d2c2dbde6e62d136fe3c4fb81088b091c3e authored almost 11 years ago by Adrian Thurston <[email protected]>github.com/BioJulia/ragel - 94db9c9b6303234ede1fe9d905399732376843b0 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 0a46c9aceb4e81c16d5c63a9f87c36f527efcb18 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - c614807d2b1dce837fe6ed343d72b8866d013508 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - a23516d1922289c3b1ea22d58bcd3211484ab79d authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 910be1ee65f16c6634ea6727cd8647853ee7d052 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - c1cd7ddfb2728b49b055858c3d5bffbf5828b3e6 authored almost 11 years ago by Adrian Thurston <[email protected]>
Eliminates errors, but adds warnings. Correct solution is to be explicit about
where the fallthr...
github.com/BioJulia/ragel - 71bb4bdbd59243e04f3cac8aef76cd69ae27c576 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - cd35756c2ca4cb60c3448e5e5b29a105247dab8a authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 26d99b7dd5b05d93ba1bd9a3126bdd3915584216 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 6394ce5c8dd55644d21e95907221ca7b92b3e5f4 authored almost 11 years ago by Adrian Thurston <[email protected]>
Can't do pointer arithmetic in D, as is done in C.
github.com/BioJulia/ragel - 8a459b2a9db90c2e7ad65022ccdab82cf02f935c authored almost 11 years ago by Adrian Thurston <[email protected]>
Note that we are fixing the size of the types in C and this will need to be
fixed. Good chance w...
github.com/BioJulia/ragel - 2b669cde5998d4eb711f3ad1e88e62820f61679a authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - c3a93837dc96d1529dba8c38be978c51bcece703 authored almost 11 years ago by Adrian Thurston <[email protected]>
This will allow us to choose the type for the array in the code generator.
github.com/BioJulia/ragel - a8aa2b2b4e0c5bf00abf10c4be1e6e1149477d0b authored almost 11 years ago by Adrian Thurston <[email protected]>github.com/BioJulia/ragel - 9729e44647defa77377ab8ce2cea5fe53b025690 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 26382fb243c36cbb43020f12e29f9058b911881c authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - f6658f064a18fab670446afae5fb5fbba9e17e8a authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - bfb4d49fbfd955914fa4a03ab4eae8557a885e85 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 43264ad09a2cfd6c691087966b4a143642cd86eb authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - fcee6f9e213c04f5eb0981eb89f01b0fe4d8ff66 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 6e76f9772b3dabd31ab31076c9a0a7ca52700332 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 52326264b3a6863d75ead992bb53737c65e91b9f authored almost 11 years ago by Adrian Thurston <[email protected]>
no longer using token lists to catch text unstructured
github.com/BioJulia/ragel - 74949b7b84a826fd27d6ea1a2e7224eaa5278418 authored almost 11 years ago by Adrian Thurston <[email protected]>github.com/BioJulia/ragel - ac6a71e617dbcd7ac24bd2db52ca086ea1277054 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 811c72adaa840d42210924d71cfb3099c7f48c7a authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 154e4280f70451a9a4667b1949ed78b740454a45 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 5b4758811414d9aa0ddf49ef215c2ce6b1a8033d authored almost 11 years ago by Adrian Thurston <[email protected]>
Temporary. Need to look at it quite often while developing rlhc.
github.com/BioJulia/ragel - 2238891a1675801f80efd7b2ba1b18bb9dd2a871 authored almost 11 years ago by Adrian Thurston <[email protected]>github.com/BioJulia/ragel - 0db7b468108010a463bc0ad427a05e0e36805bcf authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - a429513903261a3785813b20293be5cc579298bf authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 32afee3e951e1c97e0aaf12b9886923360811416 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 73dd514807a5d60c342e5f02c697bf4b58844e3c authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 478721e191f7232e435245e6d6528658be5838a0 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 239a15cf2a6b41b178c42dd7bab3980582c9bc3a authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - f3f2ef00e988c47d703df4caa22bbfbd88dc3bec authored almost 11 years ago by Adrian Thurston <[email protected]>
Also eliminated the language-specific line directives. We just indicate the
line at the beginnin...
github.com/BioJulia/ragel - 5b20c8d7aa4f978540425c3d832152c46f075bbd authored almost 11 years ago by Adrian Thurston <[email protected]>
The intermediate file starts as generated code. Will use %{}% for nested
generated code.
The de...
github.com/BioJulia/ragel - a0fdcb1520fe89433b974daa5d52a2fdc1d72ffa authored almost 11 years ago by Adrian Thurston <[email protected]>github.com/BioJulia/ragel - a420681442008e9146fd938a2e3c8d20b8bd12d1 authored almost 11 years ago by Adrian Thurston <[email protected]>
Going to experiment with a final compilation step that transforms generated
code into the target...
github.com/BioJulia/ragel - 80abace1932ed0275f9f531da2714c83821fd832 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - b2538f4a3ef3b41adccf39009d76c6bac3a1c6de authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 57c991cf96c5924d2d37ac2a45ae67f7eb10529d authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - bc379b4337bc1ba608d496d0c01326b1443fe343 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 0f2c6886ef9d1dba6facaf78f25556827d68740c authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - c6c8ba6779b9c2f6352a3ed8cac01c5bc6992a17 authored almost 11 years ago by Adrian Thurston <[email protected]>
CodeStyle codeStyle;
MinimizeLevel minimizeLevel;
MinimizeOpt minimizeOpt;
bool generateXML;
boo...
github.com/BioJulia/ragel - 1a8686d2256c3cfd98150d8bce8d90e8e1854947 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - eca325d009ec58b57401f714ea12ad71320d10fb authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - af76d3e6d3871d31fcf554b27bb1a0bec298138d authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 8d52709f8867399b737c7cb94e40a6d0373524c6 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - e6b51467cf911e453fce4e647c5349339bd654d3 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - ce3af338a122ea1ef93bf32494103950927e9c13 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 9cda40b591ead02a30caa6c374e668841636c6f6 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 0ec33e1c02a53a052eb255f247475c803ac96d89 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 7573e982dc06ff924734ba53aaf024f0bc19b066 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 5c5a1a88eb0f0ad8946035221a601383fbbc4a3c authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 357d0e3fb384f2c59a91bdc77c0aa0ddb31ff274 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - deda7088064bd86a3f4379450bdd5a7bcaa39112 authored almost 11 years ago by Adrian Thurston <[email protected]>
Looking to eliminate the hostLang pointer. Going to pass it down from main.
github.com/BioJulia/ragel - 740abd6769f9a549069261ed3ee0dd5062b26c0f authored almost 11 years ago by Adrian Thurston <[email protected]>github.com/BioJulia/ragel - 4eaed969d4e3c93174301eaa6bea3053abcd9f1e authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 18c6bfd345e3d303597cdfa0bb5afc0e21feee41 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - b212a087b745d0e3199a647dac342776ef34bb91 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 75e10e60e05309efd4a9609165ad203a5d1d27aa authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 3537d419d3e9963883b716b3efa47b7b17c23875 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 17ea3562df2f544db24ddbb743231cac398f08f3 authored almost 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 1795a3b6845419331ca73d406a3ea98cfe9f3676 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 7bf7f591075bbf11c6b455da0f4c8db0b61b4f37 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - cde6b1ccd1bc8c13f4b593131eea58aacd30ffb2 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 5e53d544670a36f3ebb70ab1b3f9206a0a235c81 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - afac2c2d51c2fa31e23bbfc02b304a107f96647d authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 2d12b5e947921e121c39725a4690eb644e4b94d6 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 5ac46eed8a9326f282713a8b004626ce35b59b3e authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 8631dad1c20dfe172251adbcd65799e7f34815bc authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 61723da11360b3267763f2a287b5166ddacc7f43 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - e5ed9eb1c0a9cc9cb44fb51947db59f55f19c4af authored about 11 years ago by Adrian Thurston <[email protected]>
This now matches the runtest syntax for output. The ifdef syntax was
inconvenient with the TXL l...
github.com/BioJulia/ragel - 4167b907f66cb75f390503c46587fcdfbde30f2a authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 0eb94adaab3998b9876d0cebb781b679aa672b87 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 58fe81aeaa750eff370d058acef44de6f7afc32c authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 74b78327fc92343101ded8c491b308aed8829105 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - c5fcca70f411c6f132db23f67dfeb48404e2f482 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - cb4a53da71cdf50fbdae45e456e0e42fea00900c authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - e94f5dc1ddf3008d6a518930c2c6c3f091ef31e6 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - b01206b69e7d1c0ccee04bcef8b0e6c9b4781d4f authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - d6e80feb351e519d838fb7cd1a3ad4b7a46140ed authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - ca5829f7cbfec97ab45e1b90eea089db571030b8 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 20159c5d3ad268070d57b98521a62e265fae36b8 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - c42426cad771e74f59b023bb1c5d99f6444ee88f authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 9b037e5ddfd1b811f9c55ff698ee8e76352d05d9 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 36612fc215f596b765679711ed314ef769fcc0a8 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 9fb721082512b414cf731d9f3b4062b30f6f6954 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - b79c15c5d2b2d671a97e10dab327495621f55357 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 22d1b2ba5a75e13aab88a68db092157ac9072613 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - dea3d90d2e86b73e65adbd3c7b2d653b519716c6 authored about 11 years ago by Adrian Thurston <[email protected]>
github.com/BioJulia/ragel - 8be9cf3355925e0aace8ca664091395129e0d39a authored about 11 years ago by Adrian Thurston <[email protected]>