Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

BioJulia

Bioinformatics and Computational Biology in Julia
Collective - Host: opensource - https://opencollective.com/biojulia - Website: https://biojulia.net - Code: https://github.com/BioJulia

Added documentation with Documenter.jl

github.com/BioJulia/GenomicAnnotations.jl - e895a482e6beb0621286d4576247f18d78e49e28 authored about 5 years ago by Karl Dyrhage <[email protected]>
Renamed pushproperty! variable names to better reflect terminology

github.com/BioJulia/GenomicAnnotations.jl - 74cfe199bf6ae329f0ccad49e415afe10815b830 authored about 5 years ago by Karl Dyrhage <[email protected]>
Updated docs to use FASTX

github.com/BioJulia/GenomicAnnotations.jl - 5ea9f25a87e1b1ad9bfacfa639850305a8edc7d2 authored about 5 years ago by Karl Dyrhage <[email protected]>
Improved documentations

github.com/BioJulia/GenomicAnnotations.jl - f0b5e5e67dc4e1f2587ee0468473abc454bafb3c authored about 5 years ago by Karl Dyrhage <[email protected]>
Updated readgbk docstring

github.com/BioJulia/GenomicAnnotations.jl - df785783f76d1e1220befd1d414612bfaaa72500 authored about 5 years ago by Karl Dyrhage <[email protected]>
Added support for the join operator, and more documentation

github.com/BioJulia/GenomicAnnotations.jl - c766efb7f7bb4e637f4739a9044d59ceccd309fe authored about 5 years ago by Karl Dyrhage <[email protected]>
Update EUtils manual

github.com/BioJulia/BioServices.jl - c2311a73b8608848eb63945679c5bc9d52af85e4 authored about 5 years ago by Miguel Madrid Mencía <[email protected]>
Update AlleleFreq.jl

github.com/BioJulia/PopGen.jl_archive - 5ec80fb4f5f8e8630bfe5aa3789f86b131f4735a authored about 5 years ago by pdimens <[email protected]>
Update AlleleFreq.jl

github.com/BioJulia/PopGen.jl - 5ec80fb4f5f8e8630bfe5aa3789f86b131f4735a authored about 5 years ago by pdimens <[email protected]>
fix nancycats import

github.com/BioJulia/PopGen.jl - 8f4bc1febfdc98140135d39e970d7b706b3fd647 authored about 5 years ago by pdimens <[email protected]>
fix nancycats import

github.com/BioJulia/PopGen.jl_archive - 8f4bc1febfdc98140135d39e970d7b706b3fd647 authored about 5 years ago by pdimens <[email protected]>
introduce PopOpt

add immutable PopOpt, and add to most functions for performance and memory efficiency boost

github.com/BioJulia/PopGen.jl_archive - 401cded193f5cca9a55062f358e25486c3f2824a authored about 5 years ago by pdimens <[email protected]>
introduce PopOpt

add immutable PopOpt, and add to most functions for performance and memory efficiency boost

github.com/BioJulia/PopGen.jl - 401cded193f5cca9a55062f358e25486c3f2824a authored about 5 years ago by pdimens <[email protected]>
bump version

github.com/BioJulia/BioStructures.jl - 216c13037d880d9d11ed5c04dcce02dad29b9ce4 authored about 5 years ago by Joe Greener <[email protected]>
remove argument tables from docs

github.com/BioJulia/BioStructures.jl - 0c2aaf81c96c2da4a727f32b812d78d6b09bd2f5 authored about 5 years ago by Joe Greener <[email protected]>
correct text in docstring

github.com/BioJulia/BioStructures.jl - dc02033dfff6efece0401708a8269a2c9206560f authored about 5 years ago by Joe Greener <[email protected]>
Update Read.jl

github.com/BioJulia/PopGen.jl - 44569988d5e8d352a1c1985eae8dffdf140337d1 authored about 5 years ago by pdimens <[email protected]>
Update Read.jl

github.com/BioJulia/PopGen.jl_archive - 44569988d5e8d352a1c1985eae8dffdf140337d1 authored about 5 years ago by pdimens <[email protected]>
don't sort during collect functions

github.com/BioJulia/BioStructures.jl - b00e84fbf352658ba6cb7e636899d7eed8449c75 authored about 5 years ago by Joe Greener <[email protected]>
add sort to docs

github.com/BioJulia/BioStructures.jl - 05bd27322de7ed15eb36d7334f86a967040d366e authored about 5 years ago by Joe Greener <[email protected]>
Merge pull request #21 from BioJulia/registrator/microbiome/3bd8f0ae/v0.5.0

New version: Microbiome v0.5.0

github.com/BioJulia/BioJuliaRegistry - ccbecbe474d0430e2067b2debff3d002b7f362c1 authored about 5 years ago by Ben J. Ward <[email protected]>
correct function signatures

github.com/BioJulia/BioStructures.jl - 1973185f7979a530ff460615d88895b2735104fb authored about 5 years ago by Joe Greener <[email protected]>
speedup resnameselector

github.com/BioJulia/BioStructures.jl - 74905e12fd4b846fbf39c6f296f072a38e562fbc authored about 5 years ago by Joe Greener <[email protected]>
speedup residue iteration

github.com/BioJulia/BioStructures.jl - 2a68c45676a1c816161ab321884db6449265f7c4 authored about 5 years ago by Joe Greener <[email protected]>
New version: Microbiome v0.5.0

UUID: 3bd8f0ae-a0f2-5238-a5af-e1b399a4940c
Repo: https://github.com/BioJulia/Microbiome.jl.git
T...

github.com/BioJulia/BioJuliaRegistry - 4c328e16671b1d52f4c95ddf8d8281da7c9a3c6e authored about 5 years ago by BioJuliaBot <[email protected]>
Update Read.jl

github.com/BioJulia/PopGen.jl - cf9e3de3e309e02b5f6cca864d63898441c0045b authored about 5 years ago by pdimens <[email protected]>
Update Read.jl

github.com/BioJulia/PopGen.jl_archive - cf9e3de3e309e02b5f6cca864d63898441c0045b authored about 5 years ago by pdimens <[email protected]>
Update Read.jl

github.com/BioJulia/PopGen.jl_archive - 8e3e0b392009b78dc6607ccd5b17719ff89988c9 authored about 5 years ago by pdimens <[email protected]>
Update Read.jl

github.com/BioJulia/PopGen.jl - 8e3e0b392009b78dc6607ccd5b17719ff89988c9 authored about 5 years ago by pdimens <[email protected]>
add auxilary gpop parser, add marker=

added `marker=` keywords` to genepop and csv parsers to specify "snp" or "msat" to adjust for In...

github.com/BioJulia/PopGen.jl - e8fb480bdfc9aad01a10667f010702d798120d58 authored about 5 years ago by pdimens <[email protected]>
add auxilary gpop parser, add marker=

added `marker=` keywords` to genepop and csv parsers to specify "snp" or "msat" to adjust for In...

github.com/BioJulia/PopGen.jl_archive - e8fb480bdfc9aad01a10667f010702d798120d58 authored about 5 years ago by pdimens <[email protected]>
Merge branch 'master' of https://github.com/pdimens/PopGen.jl

github.com/BioJulia/PopGen.jl_archive - ac3b5f42a08ff0778f108ea8b59724436446bef5 authored about 5 years ago by pdimens <[email protected]>
Merge branch 'master' of https://github.com/pdimens/PopGen.jl

github.com/BioJulia/PopGen.jl - ac3b5f42a08ff0778f108ea8b59724436446bef5 authored about 5 years ago by pdimens <[email protected]>
rm site folder

github.com/BioJulia/PopGen.jl - c07c27c060a393ed205f1774fc8d159364eaa3a6 authored about 5 years ago by pdimens <[email protected]>
rm site folder

github.com/BioJulia/PopGen.jl_archive - c07c27c060a393ed205f1774fc8d159364eaa3a6 authored about 5 years ago by pdimens <[email protected]>
Update .gitignore

github.com/BioJulia/PopGen.jl_archive - 0cf4af92a4a5a8c8a5ce1d6a9a7a0638e66ec320 authored about 5 years ago by Pavel V. Dimens <[email protected]>
Update .gitignore

github.com/BioJulia/PopGen.jl - 0cf4af92a4a5a8c8a5ce1d6a9a7a0638e66ec320 authored about 5 years ago by Pavel V. Dimens <[email protected]>
Update popobj_type.md

github.com/BioJulia/PopGen.jl - 4b87e675843cb07c5a0c2736b8f386bf1ce339b6 authored about 5 years ago by pdimens <[email protected]>
Update popobj_type.md

github.com/BioJulia/PopGen.jl_archive - 4b87e675843cb07c5a0c2736b8f386bf1ce339b6 authored about 5 years ago by pdimens <[email protected]>
Update .gitignore

github.com/BioJulia/PopGen.jl_archive - 6cf25f15fa1c29295263752bc8a80802c03100f3 authored about 5 years ago by pdimens <[email protected]>
Update .gitignore

github.com/BioJulia/PopGen.jl - 6cf25f15fa1c29295263752bc8a80802c03100f3 authored about 5 years ago by pdimens <[email protected]>
fix all the docs

github.com/BioJulia/PopGen.jl - 93005a8999870048339f8c90445ebcc90d83a96a authored about 5 years ago by pdimens <[email protected]>
fix all the docs

github.com/BioJulia/PopGen.jl_archive - 93005a8999870048339f8c90445ebcc90d83a96a authored about 5 years ago by pdimens <[email protected]>
undo all the git things

github.com/BioJulia/PopGen.jl_archive - d889f17ebd3265cf901d113bc39a67ce275f56b3 authored about 5 years ago by pdimens <[email protected]>
undo all the git things

github.com/BioJulia/PopGen.jl - d889f17ebd3265cf901d113bc39a67ce275f56b3 authored about 5 years ago by pdimens <[email protected]>
Merge branch 'dev'

github.com/BioJulia/PopGen.jl - e929dfcb1402534cb2a71bdf2bed495e8e26638d authored about 5 years ago by pdimens <[email protected]>
Merge branch 'dev'

github.com/BioJulia/PopGen.jl_archive - e929dfcb1402534cb2a71bdf2bed495e8e26638d authored about 5 years ago by pdimens <[email protected]>
Merge branch 'master' into dev

github.com/BioJulia/PopGen.jl_archive - 672589f27206cf1eddc18cf6998aa9c4387a21ef authored about 5 years ago by pdimens <[email protected]>
Merge branch 'master' into dev

github.com/BioJulia/PopGen.jl - 672589f27206cf1eddc18cf6998aa9c4387a21ef authored about 5 years ago by pdimens <[email protected]>
continue updating docs to new struct

github.com/BioJulia/PopGen.jl - 9c46f72505d297bba3a67f38ea68b26d143ea616 authored about 5 years ago by pdimens <[email protected]>
continue updating docs to new struct

github.com/BioJulia/PopGen.jl_archive - 9c46f72505d297bba3a67f38ea68b26d143ea616 authored about 5 years ago by pdimens <[email protected]>
start fixing docs

github.com/BioJulia/PopGen.jl_archive - 3f9b67dad5c8854a1c32568666179566d8f67e20 authored about 5 years ago by pdimens <[email protected]>
start fixing docs

github.com/BioJulia/PopGen.jl - 3f9b67dad5c8854a1c32568666179566d8f67e20 authored about 5 years ago by pdimens <[email protected]>
update popobj

github.com/BioJulia/PopGen.jl - aa90f5b23f24634bfe3e18ef8c6b4848cb5d6cee authored about 5 years ago by pdimens <[email protected]>
update popobj

github.com/BioJulia/PopGen.jl_archive - aa90f5b23f24634bfe3e18ef8c6b4848cb5d6cee authored about 5 years ago by pdimens <[email protected]>
merge docs from Master upstream

github.com/BioJulia/PopGen.jl_archive - 4f4a1483bc13925333ff7edc0890092c02cfc7e1 authored about 5 years ago by pdimens <[email protected]>
merge docs from Master upstream

github.com/BioJulia/PopGen.jl - 4f4a1483bc13925333ff7edc0890092c02cfc7e1 authored about 5 years ago by pdimens <[email protected]>
give up on PopObj checking

remove self-check, instead clarify docstring

github.com/BioJulia/PopGen.jl - 7a516a22f5d78e71fc7b2d667c26f3650ab01c42 authored about 5 years ago by pdimens <[email protected]>
give up on PopObj checking

remove self-check, instead clarify docstring

github.com/BioJulia/PopGen.jl_archive - 7a516a22f5d78e71fc7b2d667c26f3650ab01c42 authored about 5 years ago by pdimens <[email protected]>
various fixes

- fixed summary indexing
- missing() colnames consistent
- updated docstrings
- readers now fix ...

github.com/BioJulia/PopGen.jl_archive - 3b2210532528fff2b76d1a45d1c422d2d01f573b authored about 5 years ago by pdimens <[email protected]>
various fixes

- fixed summary indexing
- missing() colnames consistent
- updated docstrings
- readers now fix ...

github.com/BioJulia/PopGen.jl - 3b2210532528fff2b76d1a45d1c422d2d01f573b authored about 5 years ago by pdimens <[email protected]>
Update README.md

github.com/BioJulia/PopGen.jl - 52218794d86e00af6be9719f951ffd5fc3f281e6 authored about 5 years ago by pdimens <[email protected]>
Update README.md

github.com/BioJulia/PopGen.jl_archive - 52218794d86e00af6be9719f951ffd5fc3f281e6 authored about 5 years ago by pdimens <[email protected]>
minor housekeeping

github.com/BioJulia/PopGen.jl_archive - 831a073fdd99197abf562750de8954791e4a7520 authored about 5 years ago by pdimens <[email protected]>
minor housekeeping

github.com/BioJulia/PopGen.jl - 831a073fdd99197abf562750de8954791e4a7520 authored about 5 years ago by pdimens <[email protected]>
add VCF parser, reduce memory load

Inclusion of VCF parser and GeneticVaration dependency. Additionally, ploidy and genotypes are n...

github.com/BioJulia/PopGen.jl - 55fa3acd965d28e6195f29b4efc674cc5d9137b4 authored about 5 years ago by pdimens <[email protected]>
add VCF parser, reduce memory load

Inclusion of VCF parser and GeneticVaration dependency. Additionally, ploidy and genotypes are n...

github.com/BioJulia/PopGen.jl_archive - 55fa3acd965d28e6195f29b4efc674cc5d9137b4 authored about 5 years ago by pdimens <[email protected]>
Update Project.toml

github.com/BioJulia/PopGen.jl_archive - 4438ed9f4db11dd16e014239a5cd439646192a73 authored about 5 years ago by pdimens <[email protected]>
Update Project.toml

github.com/BioJulia/PopGen.jl - 4438ed9f4db11dd16e014239a5cd439646192a73 authored about 5 years ago by pdimens <[email protected]>
fix broken functions with new format

github.com/BioJulia/PopGen.jl - 531a9662aff48845586fb1b838d9f768575349ca authored about 5 years ago by pdimens <[email protected]>
fix broken functions with new format

github.com/BioJulia/PopGen.jl_archive - 531a9662aff48845586fb1b838d9f768575349ca authored about 5 years ago by pdimens <[email protected]>
isolate_genotypes

removed genotypes() and loci() and combined them into a single function isolate_genotypes that a...

github.com/BioJulia/PopGen.jl_archive - ade83bb15549e40e0cc369784c4469185cfa09f2 authored about 5 years ago by pdimens <[email protected]>
isolate_genotypes

removed genotypes() and loci() and combined them into a single function isolate_genotypes that a...

github.com/BioJulia/PopGen.jl - ade83bb15549e40e0cc369784c4469185cfa09f2 authored about 5 years ago by pdimens <[email protected]>
added missing data handling

github.com/BioJulia/PopGen.jl - 0cf1e720d18dcda2126f588c2cb529bb7725c188 authored about 5 years ago by pdimens <[email protected]>
added missing data handling

github.com/BioJulia/PopGen.jl_archive - 0cf1e720d18dcda2126f588c2cb529bb7725c188 authored about 5 years ago by pdimens <[email protected]>
Update Datasets.jl

github.com/BioJulia/PopGen.jl_archive - 8cc680bd1d39bb907991b6cc930ea0c3538a2c8a authored about 5 years ago by pdimens <[email protected]>
Update Datasets.jl

github.com/BioJulia/PopGen.jl - 8cc680bd1d39bb907991b6cc930ea0c3538a2c8a authored about 5 years ago by pdimens <[email protected]>
Update PopGen.jl

github.com/BioJulia/PopGen.jl - 80d1f74f317031f06ea8d5aad40853fc43edd661 authored about 5 years ago by pdimens <[email protected]>
Update PopGen.jl

github.com/BioJulia/PopGen.jl_archive - 80d1f74f317031f06ea8d5aad40853fc43edd661 authored about 5 years ago by pdimens <[email protected]>
add testdata

github.com/BioJulia/PopGen.jl_archive - 1ab9ffea709b2441c3b0af0265713d3d60bfc28d authored about 5 years ago by pdimens <[email protected]>
add testdata

github.com/BioJulia/PopGen.jl - 1ab9ffea709b2441c3b0af0265713d3d60bfc28d authored about 5 years ago by pdimens <[email protected]>
Create Datasets.jl

github.com/BioJulia/PopGen.jl - 440ed8cf421128b50fd5d30b26bb22a1a39d91a8 authored about 5 years ago by pdimens <[email protected]>
Create Datasets.jl

github.com/BioJulia/PopGen.jl_archive - 440ed8cf421128b50fd5d30b26bb22a1a39d91a8 authored about 5 years ago by pdimens <[email protected]>
add testdata functions

github.com/BioJulia/PopGen.jl_archive - 1ceaad677babfc1722f0d37572fa06557a8ebd07 authored about 5 years ago by pdimens <[email protected]>
add testdata functions

github.com/BioJulia/PopGen.jl - 1ceaad677babfc1722f0d37572fa06557a8ebd07 authored about 5 years ago by pdimens <[email protected]>
refactor popobj

github.com/BioJulia/PopGen.jl - 988d0cd6e33d5ef3828c8820e97da0eb08673689 authored about 5 years ago by pdimens <[email protected]>
refactor popobj

github.com/BioJulia/PopGen.jl_archive - 988d0cd6e33d5ef3828c8820e97da0eb08673689 authored about 5 years ago by pdimens <[email protected]>
Update Read.jl

github.com/BioJulia/PopGen.jl_archive - a8b36b5e1426c56374c9b5a5b80a3014d1cfbcf4 authored about 5 years ago by pdimens <[email protected]>
Update Read.jl

github.com/BioJulia/PopGen.jl - a8b36b5e1426c56374c9b5a5b80a3014d1cfbcf4 authored about 5 years ago by pdimens <[email protected]>
Update PopObj.jl

github.com/BioJulia/PopGen.jl - 91ffffedb6cfd39ca427f3694f6954f70077d673 authored about 5 years ago by pdimens <[email protected]>
Update PopObj.jl

github.com/BioJulia/PopGen.jl_archive - 91ffffedb6cfd39ca427f3694f6954f70077d673 authored about 5 years ago by pdimens <[email protected]>
add icons

github.com/BioJulia/PopGen.jl_archive - 8d2744d2f519f2c4bdb8043538902c64017d1c36 authored about 5 years ago by pdimens <[email protected]>
add icons

github.com/BioJulia/PopGen.jl - 8d2744d2f519f2c4bdb8043538902c64017d1c36 authored about 5 years ago by pdimens <[email protected]>
optimize csv, update ploidy

github.com/BioJulia/PopGen.jl - eba19a49a3ad991507cb08eca5661eae25f996f0 authored about 5 years ago by pdimens <[email protected]>
optimize csv, update ploidy

github.com/BioJulia/PopGen.jl_archive - eba19a49a3ad991507cb08eca5661eae25f996f0 authored about 5 years ago by pdimens <[email protected]>
Filtered oyster polyploid vcf

github.com/BioJulia/PopGen.jl_archive - ef96ad1fe926559769335586b2a7fe1e95c1c294 authored about 5 years ago by jdselwyn <[email protected]>
Filtered oyster polyploid vcf

github.com/BioJulia/PopGen.jl - ef96ad1fe926559769335586b2a7fe1e95c1c294 authored about 5 years ago by jdselwyn <[email protected]>
Polyploid Pooled Oyster Mitochondrial data

github.com/BioJulia/PopGen.jl - 8e378d26673f2b7f60bc0785774f279bf6739224 authored about 5 years ago by jdselwyn <[email protected]>
Polyploid Pooled Oyster Mitochondrial data

github.com/BioJulia/PopGen.jl_archive - 8e378d26673f2b7f60bc0785774f279bf6739224 authored about 5 years ago by jdselwyn <[email protected]>
Merge pull request #20 from CiaranOMara/master

Add FormatSpecimens v1.0.1

github.com/BioJulia/BioJuliaRegistry - 7d0174b17e9b923079944f3910d134e24766dc2a authored about 5 years ago by Ben J. Ward <[email protected]>