Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

BioJulia

Bioinformatics and Computational Biology in Julia
Collective - Host: opensource - https://opencollective.com/biojulia - Website: https://biojulia.net - Code: https://github.com/BioJulia

Update AlleleFreq.jl

minor optimizations

github.com/BioJulia/PopGen.jl - 0e5131502e42b432e3bb4c7e4cf36fff00ac32cd authored almost 5 years ago by Pavel <[email protected]>
Update AlleleFreq.jl

minor optimizations

github.com/BioJulia/PopGen.jl_archive - 0e5131502e42b432e3bb4c7e4cf36fff00ac32cd authored almost 5 years ago by Pavel <[email protected]>
some early changes

rename instances of x::PopObj with data::PopObj for clarity. In general, be more verbose/obvious...

github.com/BioJulia/PopGen.jl - a622c727c250af53641ae6f6719bf81d0b813654 authored almost 5 years ago by Pavel <[email protected]>
some early changes

rename instances of x::PopObj with data::PopObj for clarity. In general, be more verbose/obvious...

github.com/BioJulia/PopGen.jl_archive - a622c727c250af53641ae6f6719bf81d0b813654 authored almost 5 years ago by Pavel <[email protected]>
explicit versions etc

github.com/BioJulia/MicrobiomePlots.jl - 7bbbfff9da151a32ea7021c648cf5e23d7eea0d8 authored almost 5 years ago by Kevin Bonham <[email protected]>
Add compatibility for Julia 1.3-rc4 (#66)

* Add compatibility for Julia 1.3-rc4

* Upgrade to `Project.toml`/Julia 1.0+

* Update test...

github.com/BioJulia/Libz.jl - c82db8e050faf08837164f9e77058dc899fd2818 authored almost 5 years ago by Elliot Saba <[email protected]>
New version: Microbiome v0.5.1

UUID: 3bd8f0ae-a0f2-5238-a5af-e1b399a4940c
Repo: https://github.com/BioJulia/Microbiome.jl.git
T...

github.com/BioJulia/BioJuliaRegistry - a145daccafb48eaeb72cb7ce5b1a51caea9654ca authored almost 5 years ago by BioJuliaBot <[email protected]>
New package: BiobakeryUtils v0.2.0

UUID: fa5322f5-bd84-5069-834a-abf3230fb8f8
Repo: https://github.com/BioJulia/BiobakeryUtils.jl.g...

github.com/BioJulia/BioJuliaRegistry - acf76018ef3cbda7b2eeae072e979b43d86da885 authored almost 5 years ago by BioJuliaBot <[email protected]>
Add occursin method for exact searching (#76)

github.com/BioJulia/BioSequences.jl - 9bc2ba5e1072a31b45ec1c4c0fb52f0e4a6089ed authored almost 5 years ago by Peter Haverty <[email protected]>
superimposition tests

github.com/BioJulia/BioStructures.jl - fb319c97bf050f6375eedbcd1ae6f11bb7e387ca authored almost 5 years ago by Joe Greener <[email protected]>
add O to backbone atoms, superimposition docs

github.com/BioJulia/BioStructures.jl - 2d116f210bd0e5a12e42a32efdebffa3a8036b31 authored almost 5 years ago by Joe Greener <[email protected]>
applytransform

github.com/BioJulia/BioStructures.jl - 3f608b78c9d772a8799386d53458eff291213d35 authored almost 5 years ago by Joe Greener <[email protected]>
RMSD superimposes

github.com/BioJulia/BioStructures.jl - 1c6a22c3b1608f9f71366f5b7c60f3bc91d6985c authored almost 5 years ago by Joe Greener <[email protected]>
rename variables

github.com/BioJulia/BioStructures.jl - 1c90fc686a31a58827e068c9dc8d3c71f398bb7d authored almost 5 years ago by Joe Greener <[email protected]>
aligned indices as part of Transformation

github.com/BioJulia/BioStructures.jl - faa5df39bc628611120b8cf7ff2bdde6310ee8df authored almost 5 years ago by Joe Greener <[email protected]>
displacements does superimposition

github.com/BioJulia/BioStructures.jl - ccc28589f48994956d7111a86a50ffb158a5bdc9 authored almost 5 years ago by Joe Greener <[email protected]>
use Greek alpha and beta

github.com/BioJulia/BioStructures.jl - ab91a30ef62ff84bab3e1c15c2f6343a67445d2a authored almost 5 years ago by Joe Greener <[email protected]>
abstract type parameter

github.com/BioJulia/BioStructures.jl - 9095038533a48711ec43fdc22160d9f84d16216a authored almost 5 years ago by Joe Greener <[email protected]>
superimpose structural elements

github.com/BioJulia/BioStructures.jl - 9fe04f6649ace8fa0a40662c5b0509e6ee74cb9a authored almost 5 years ago by Joe Greener <[email protected]>
Transformation struct and docstrings

github.com/BioJulia/BioStructures.jl - bd96eb1d0290781f5dde6051e9033654627ec4ea authored almost 5 years ago by Joe Greener <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - e732335f34e9ff9607e64ddda9fc4e699a4b6e9c authored almost 5 years ago by Jason Selwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - e732335f34e9ff9607e64ddda9fc4e699a4b6e9c authored almost 5 years ago by Jason Selwyn <[email protected]>
minor touchups

github.com/BioJulia/PopGen.jl - 6eda29b9609a7a442384b57e457f151d5975221a authored about 5 years ago by Pavel <[email protected]>
minor touchups

github.com/BioJulia/PopGen.jl_archive - 6eda29b9609a7a442384b57e457f151d5975221a authored about 5 years ago by Pavel <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl_archive - 8a90ea1cf151faf5ed752d8a4c87f59d0e277136 authored about 5 years ago by Jason Selwyn <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - 8a90ea1cf151faf5ed752d8a4c87f59d0e277136 authored about 5 years ago by Jason Selwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - 803730039e73fee1bfdf9c6e6e3c1ba364cdd77b authored about 5 years ago by Jason Selwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - 803730039e73fee1bfdf9c6e6e3c1ba364cdd77b authored about 5 years ago by Jason Selwyn <[email protected]>
update allele_avg docstring

github.com/BioJulia/PopGen.jl_archive - 0455b99254f0959c4a0446235a9bd07bcc120655 authored about 5 years ago by Pavel <[email protected]>
update allele_avg docstring

github.com/BioJulia/PopGen.jl - 0455b99254f0959c4a0446235a9bd07bcc120655 authored about 5 years ago by Pavel <[email protected]>
add rounding to allele_avg

github.com/BioJulia/PopGen.jl_archive - da526595e18f38014205cbd1d51b5b9be3a08e0b authored about 5 years ago by Pavel <[email protected]>
add rounding to allele_avg

github.com/BioJulia/PopGen.jl - da526595e18f38014205cbd1d51b5b9be3a08e0b authored about 5 years ago by Pavel <[email protected]>
add allele_avg

github.com/BioJulia/PopGen.jl - 953ca14b2575666096f0b526e01085fc3fb7f9b0 authored about 5 years ago by Pavel <[email protected]>
add allele_avg

github.com/BioJulia/PopGen.jl_archive - 953ca14b2575666096f0b526e01085fc3fb7f9b0 authored about 5 years ago by Pavel <[email protected]>
finish basic FST

github.com/BioJulia/PopGen.jl - d2df618a6c30a2743ea66087854a8ace02e81354 authored about 5 years ago by Pavel <[email protected]>
finish basic FST

github.com/BioJulia/PopGen.jl_archive - d2df618a6c30a2743ea66087854a8ace02e81354 authored about 5 years ago by Pavel <[email protected]>
setting up some stuff for Fstats and adding @info tags

github.com/BioJulia/PopGen.jl_archive - 23e414042edb94d2561cba466cbed70949873d32 authored about 5 years ago by Pavel V. Dimens <[email protected]>
setting up some stuff for Fstats and adding @info tags

github.com/BioJulia/PopGen.jl - 23e414042edb94d2561cba466cbed70949873d32 authored about 5 years ago by Pavel V. Dimens <[email protected]>
update news, bump version

github.com/BioJulia/BioStructures.jl - 9a7d3c2d2dda9c31db47b9bea037edd4acda5c1a authored about 5 years ago by Joe Greener <[email protected]>
DataFrame tests

github.com/BioJulia/BioStructures.jl - e372b5de1a4bc602f37e3077c36e1cb05ce0b45d authored about 5 years ago by Joe Greener <[email protected]>
DataFrame constructor and docs

github.com/BioJulia/BioStructures.jl - e22900c860b2da818d632231a387cc231de0b285 authored about 5 years ago by Joe Greener <[email protected]>
separate functions for isdisordered

github.com/BioJulia/BioStructures.jl - 8b50df70ec95bfc0074c7a06bc67dbd47b35e3ab authored about 5 years ago by Joe Greener <[email protected]>
start basic fstats

github.com/BioJulia/PopGen.jl - d078e42f5a018f8355fce7224d2c9544b5e3d714 authored about 5 years ago by Pavel V. Dimens <[email protected]>
start basic fstats

github.com/BioJulia/PopGen.jl_archive - d078e42f5a018f8355fce7224d2c9544b5e3d714 authored about 5 years ago by Pavel V. Dimens <[email protected]>
Merge pull request #28 from ibacher/fix_docs

Updates to :crossed_fingers: fix the documentation build

github.com/BioJulia/BioServices.jl - 95279e0b0d5347a0dab9357f568dccce196be548 authored about 5 years ago by Maria Isabel Restrepo <[email protected]>
progress bar

github.com/BioJulia/PopGen.jl_archive - 131b3316fede4489bbdbf7b5aa0ae525536ff146 authored about 5 years ago by jdselwyn <[email protected]>
progress bar

github.com/BioJulia/PopGen.jl - 131b3316fede4489bbdbf7b5aa0ae525536ff146 authored about 5 years ago by jdselwyn <[email protected]>
add linear algebra

github.com/BioJulia/PopGen.jl - f9113c0e99dcc2e8365cf4afa55f7ced8aa2a370 authored about 5 years ago by jdselwyn <[email protected]>
add linear algebra

github.com/BioJulia/PopGen.jl_archive - f9113c0e99dcc2e8365cf4afa55f7ced8aa2a370 authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - 8961fae8f90e7619c61807adfea4313d44f16c9e authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - 8961fae8f90e7619c61807adfea4313d44f16c9e authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - e1b0e7dcd0eddb68ad7537cb230a48f86b1849cf authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - e1b0e7dcd0eddb68ad7537cb230a48f86b1849cf authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - 2169c224bb1dcf8ca5e4b56e1fc6ccbbd718c66c authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - 2169c224bb1dcf8ca5e4b56e1fc6ccbbd718c66c authored about 5 years ago by jdselwyn <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl_archive - d79604caa4c659f6c53a448502955651096de4c4 authored about 5 years ago by jdselwyn <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - d79604caa4c659f6c53a448502955651096de4c4 authored about 5 years ago by jdselwyn <[email protected]>
solver tests

github.com/BioJulia/PopGen.jl_archive - f08bf2f3a0ae63b8d7b3ef5e41536ea1da44c2b3 authored about 5 years ago by jdselwyn <[email protected]>
solver tests

github.com/BioJulia/PopGen.jl - f08bf2f3a0ae63b8d7b3ef5e41536ea1da44c2b3 authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - 82421bed5ecdc5f088dfb617ae588da27fc1936d authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - 82421bed5ecdc5f088dfb617ae588da27fc1936d authored about 5 years ago by jdselwyn <[email protected]>
add allele_freq(tuple)

Added method to allele_freq to work on a single genotype (tuple)

github.com/BioJulia/PopGen.jl_archive - 3ae3b3cfee483666b9443faaf918963165db1e5c authored about 5 years ago by Pavel <[email protected]>
add allele_freq(tuple)

Added method to allele_freq to work on a single genotype (tuple)

github.com/BioJulia/PopGen.jl - 3ae3b3cfee483666b9443faaf918963165db1e5c authored about 5 years ago by Pavel <[email protected]>
housekeeping: organize functions alphabetically

github.com/BioJulia/PopGen.jl_archive - ef4ca3681dd674278a0b0ca4488af02b9acbb82a authored about 5 years ago by Pavel <[email protected]>
housekeeping: organize functions alphabetically

github.com/BioJulia/PopGen.jl - ef4ca3681dd674278a0b0ca4488af02b9acbb82a authored about 5 years ago by Pavel <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl_archive - 75b393bb5614e8cd11d8c732b788769833c13a3c authored about 5 years ago by Pavel <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - 75b393bb5614e8cd11d8c732b788769833c13a3c authored about 5 years ago by Pavel <[email protected]>
Typed variable inputs

github.com/BioJulia/PopGen.jl_archive - f76d703759c88b0cfd9f7f97e0b985f5bf51ce42 authored about 5 years ago by jdselwyn <[email protected]>
Typed variable inputs

github.com/BioJulia/PopGen.jl - f76d703759c88b0cfd9f7f97e0b985f5bf51ce42 authored about 5 years ago by jdselwyn <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - 47ab6193fc2a55a0856a6e62b327e52bb6db3b1a authored about 5 years ago by Pavel <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl_archive - 47ab6193fc2a55a0856a6e62b327e52bb6db3b1a authored about 5 years ago by Pavel <[email protected]>
add prelim relatedness docs

github.com/BioJulia/PopGen.jl - 9339dac88b556eb43e305c1b062def240bdf73c0 authored about 5 years ago by Pavel <[email protected]>
add prelim relatedness docs

github.com/BioJulia/PopGen.jl_archive - 9339dac88b556eb43e305c1b062def240bdf73c0 authored about 5 years ago by Pavel <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - 389e299ae2ec0c562fe64da57148ed1f77ff7a53 authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - 389e299ae2ec0c562fe64da57148ed1f77ff7a53 authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - 268032d73cc351c24662e5ad8fa0f42c16ffb951 authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - 268032d73cc351c24662e5ad8fa0f42c16ffb951 authored about 5 years ago by jdselwyn <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - 5ffb4a4ba26bee969890caef7edf17e2adf5d3f5 authored about 5 years ago by Pavel <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl_archive - 5ffb4a4ba26bee969890caef7edf17e2adf5d3f5 authored about 5 years ago by Pavel <[email protected]>
Create relatedness.md

github.com/BioJulia/PopGen.jl_archive - e9d1dd51ccf0a296e72087ddaa891397c77e6d18 authored about 5 years ago by Pavel <[email protected]>
Create relatedness.md

github.com/BioJulia/PopGen.jl - e9d1dd51ccf0a296e72087ddaa891397c77e6d18 authored about 5 years ago by Pavel <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl_archive - 9cca98616887a0b29184089942d711ca0ccae4c8 authored about 5 years ago by jdselwyn <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - 9cca98616887a0b29184089942d711ca0ccae4c8 authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - 9d99fc390a483068a2ed18136eb6fa30ed2dc41d authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - 9d99fc390a483068a2ed18136eb6fa30ed2dc41d authored about 5 years ago by jdselwyn <[email protected]>
minor touchups

github.com/BioJulia/PopGen.jl_archive - e8f7a631ad36f90bc92de0df0906871a248de854 authored about 5 years ago by Pavel <[email protected]>
minor touchups

github.com/BioJulia/PopGen.jl - e8f7a631ad36f90bc92de0df0906871a248de854 authored about 5 years ago by Pavel <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - aa3057aaab47a1dcc844d5645003e6d80db2e229 authored about 5 years ago by Pavel <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl_archive - aa3057aaab47a1dcc844d5645003e6d80db2e229 authored about 5 years ago by Pavel <[email protected]>
add new deps

github.com/BioJulia/PopGen.jl - 8d6e14f84d6fb91bcb9821351bf7ce2c955473ba authored about 5 years ago by Pavel <[email protected]>
add new deps

github.com/BioJulia/PopGen.jl_archive - 8d6e14f84d6fb91bcb9821351bf7ce2c955473ba authored about 5 years ago by Pavel <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - edd507b348a11f2bcf2ac6f531e3707b59c181a1 authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - edd507b348a11f2bcf2ac6f531e3707b59c181a1 authored about 5 years ago by jdselwyn <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - 9ab137cd7402200500f8436d41442efac0a49262 authored about 5 years ago by jdselwyn <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl_archive - 9ab137cd7402200500f8436d41442efac0a49262 authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl - 012741ba6599c072a2c823f364c0c223d8550de5 authored about 5 years ago by jdselwyn <[email protected]>
Update PairwiseRelatedness.jl

github.com/BioJulia/PopGen.jl_archive - 012741ba6599c072a2c823f364c0c223d8550de5 authored about 5 years ago by jdselwyn <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - ede9f8ac2b5f7cafdb77548ae028b15087e19f87 authored about 5 years ago by Pavel <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl_archive - ede9f8ac2b5f7cafdb77548ae028b15087e19f87 authored about 5 years ago by Pavel <[email protected]>
Update popobj_type.md

github.com/BioJulia/PopGen.jl_archive - 737c995ba75fe33805c1e7ef75a43283c79d84ae authored about 5 years ago by Pavel <[email protected]>