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BioJulia

Bioinformatics and Computational Biology in Julia
Collective - Host: opensource - https://opencollective.com/biojulia - Website: https://biojulia.net - Code: https://github.com/BioJulia

Update Project.toml

github.com/BioJulia/BioMakie.jl - 7c06034248db4422fe6c6fd828d1b62e6478cb80 authored about 3 years ago by Dan Kool <[email protected]>
fixtypos1

github.com/BioJulia/BioMakie.jl - cc6a8e0540f6aaf76b30d7ed93fd778fca8ac979 authored about 3 years ago by kool7d <[email protected]>
Merge pull request #181 from jakobnissen/fixdocs

Fix doctests after type alias renaming

github.com/BioJulia/BioSequences.jl - 22ea7accb73e927e2f5912fa910553bdd03d77bb authored about 3 years ago by Jakob Nybo Nissen <[email protected]>
Fix doctests after type alias renaming

github.com/BioJulia/BioSequences.jl - fca028445e4fdeeed864f61e9638ba32d696b7cb authored about 3 years ago by Jakob Nybo Nissen <[email protected]>
Merge pull request #353 from kool7d/adev

Merge pull request #352 from kool7d/master

github.com/BioJulia/BioMakie.jl - 3de5a5b030e9b7660c409098922781eb5ea60b76 authored about 3 years ago by Dan Kool <[email protected]>
Merge pull request #352 from kool7d/master

updep1

github.com/BioJulia/BioMakie.jl - 2a1cf34ff3ff5a6c1c5b897930b81da1fd13591d authored about 3 years ago by Dan Kool <[email protected]>
Merge branch 'adev' into master

github.com/BioJulia/BioMakie.jl - c3bbc55a20172b48eeb7ad24a7bda81b6009a9b9 authored about 3 years ago by Dan Kool <[email protected]>
Update Project.toml

github.com/BioJulia/BioMakie.jl - e6a5a1c3c55870bf76b2e63a629267ed4cbc6827 authored about 3 years ago by Dan Kool <[email protected]>
Merge pull request #351 from kool7d/compathelper/new_version/2021-07-31-00-54-12-642-2159244280

CompatHelper: add new compat entry for "GeometryBasics" at version "0.4"

github.com/BioJulia/BioMakie.jl - 0841dfaa955f04ec2922e12113fbdb74b3f14838 authored about 3 years ago by Dan Kool <[email protected]>
Merge remote-tracking branch 'origin/compathelper/new_version/2021-07-31-00-53-52-288-4129441936' into adev

github.com/BioJulia/BioMakie.jl - 5920288507fb9d00d52d2ba7ed1c43ec8a73abfe authored about 3 years ago by Daniel Kool <[email protected]>
Merge branch 'adev' into origin/compathelper/new_version/2021-07-31-00-53-52-288-4129441936

github.com/BioJulia/BioMakie.jl - 58f67a218e3ad8f9d4ac87669ec40df54c487812 authored about 3 years ago by Daniel Kool <[email protected]>
Merge remote-tracking branch 'origin/compathelper/new_version/2021-07-31-00-53-52-288-4129441936' into adev

github.com/BioJulia/BioMakie.jl - d06af9e2c7d9781265293db6587d00cc58c4009c authored about 3 years ago by Daniel Kool <[email protected]>
Merge remote-tracking branch 'origin/compathelper/new_version/2021-07-31-00-53-58-643-3174600883' into adev

github.com/BioJulia/BioMakie.jl - be7f87df4ed23d23cf3632497cadb6a3e26805f6 authored about 3 years ago by Daniel Kool <[email protected]>
Merge remote-tracking branch 'origin/compathelper/new_version/2021-07-31-00-54-12-642-2159244280' into adev

github.com/BioJulia/BioMakie.jl - 2e6d6e8aedb600f22408c7681056eab857ca97e3 authored about 3 years ago by Daniel Kool <[email protected]>
Merge branch 'adev' into origin/compathelper/new_version/2021-07-31-00-54-12-642-2159244280

github.com/BioJulia/BioMakie.jl - 4e734050c2db8c9dedf4b609db2e6cb40e688f82 authored about 3 years ago by Daniel Kool <[email protected]>
Merge remote-tracking branch 'origin/compathelper/new_version/2021-07-31-00-54-06-151-713959195' into adev

github.com/BioJulia/BioMakie.jl - 41ffef215360dc675d851330c8cc6eb8b6c88df3 authored about 3 years ago by Daniel Kool <[email protected]>
Merge remote-tracking branch 'origin/compathelper/new_version/2021-07-31-00-54-12-642-2159244280' into adev

github.com/BioJulia/BioMakie.jl - 020d1ca81efe36fed31d4b57e820d8c9c4d52d14 authored about 3 years ago by Daniel Kool <[email protected]>
Merge branch 'master' of https://github.com/kool7d/BioMakie.jl into master

github.com/BioJulia/BioMakie.jl - d40f5489cc275e260ce59d6b650449e9cbc19692 authored about 3 years ago by kool7d <[email protected]>
distancesAbond

github.com/BioJulia/BioMakie.jl - 936b4952159f67a6a98934dfc35b496f548cf437 authored about 3 years ago by kool7d <[email protected]>
Update README.md

github.com/BioJulia/BioMakie.jl - 02c274994dfa8525c6aaa1ab398b2fa8e840e917 authored about 3 years ago by Dan Kool <[email protected]>
Update README.md

github.com/BioJulia/BioMakie.jl - 088aac6c15abe2451f283e8d198430d3f89abaf4 authored about 3 years ago by Dan Kool <[email protected]>
Merge pull request #176 from jakobnissen/approxsearch

Approximate search now returns nothing when no match is found

github.com/BioJulia/BioSequences.jl - b369c762d876b7f716a22e0eac47677d37275602 authored about 3 years ago by Jakob Nybo Nissen <[email protected]>
update popdata fields everywhere

github.com/BioJulia/PopGenCore.jl - ab10a7a7a9d9bb5a72eb4446aaef1762f948695b authored about 3 years ago by Pavel Dimens <[email protected]>
update tests

github.com/BioJulia/PopGenCore.jl - fbc80d7ed6f0d993d4914f5d81f4ed55eb497b9c authored about 3 years ago by Pavel Dimens <[email protected]>
rename fields and add internal constructor

github.com/BioJulia/PopGenCore.jl - 22f4bd758a1a5f5dc91df17ff137cb483ba5d7a9 authored about 3 years ago by Pavel Dimens <[email protected]>
update show

github.com/BioJulia/PopGenCore.jl - af77d066875cb432631e635fdd548295092f6347 authored about 3 years ago by Pavel Dimens <[email protected]>
precompile io

github.com/BioJulia/PopGenCore.jl - e0c0e357af77092ae153d59165a9b68ffd147d40 authored about 3 years ago by Pavel Dimens <[email protected]>
notes and new show method

github.com/BioJulia/PopGenCore.jl - 4893a7fa2e45e824f0a6f23132f1c2e30d805068 authored about 3 years ago by Pavel Dimens <[email protected]>
pilot idea for popdata improvement

github.com/BioJulia/PopGenCore.jl - 24b2d6111b5829ae62bf658d89b2f4ebd7376ab8 authored about 3 years ago by Pavel Dimens <[email protected]>
include manipulate

github.com/BioJulia/PopGenCore.jl - de64988f24c26be49130f3d5439908fb5395b015 authored about 3 years ago by Pavel Dimens <[email protected]>
migrate manipulate

github.com/BioJulia/PopGenCore.jl - 1b39186e3767f3c60d07563521d840e36b72f342 authored about 3 years ago by Pavel Dimens <[email protected]>
Add files via upload

github.com/BioJulia/PopGenCore.jl - 72a8213f7741281662bb4f85f3508aa1d6a65584 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update README.md

github.com/BioJulia/BioMakie.jl - 392871a84181595d5c3af5ff0ccd49b67a6db5ae authored about 3 years ago by Dan Kool <[email protected]>
CompatHelper: add new compat entry for "GeometryBasics" at version "0.4"

github.com/BioJulia/BioMakie.jl - 6dd376a802cec0994972812f8b5001f5c0cdabf4 authored about 3 years ago by github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
CompatHelper: add new compat entry for "MIToS" at version "2"

github.com/BioJulia/BioMakie.jl - 39d70a0d8c9c5cf42af9c77145ff6eba81120cb4 authored about 3 years ago by github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
CompatHelper: add new compat entry for "JLD2" at version "0.4"

github.com/BioJulia/BioMakie.jl - 3983adc7fe5676ebc0f7aa3d17d4295894c039e7 authored about 3 years ago by github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
CompatHelper: add new compat entry for "Literate" at version "2"

github.com/BioJulia/BioMakie.jl - 17482842074669d028b68af1a643e29f3330b919 authored about 3 years ago by github-actions[bot] <41898282+github-actions[bot]@users.noreply.github.com>
Update README.md

github.com/BioJulia/BioMakie.jl - 66df2f913b248c2826e3e4b59800a199fa0f0f38 authored about 3 years ago by Dan Kool <[email protected]>
Add files via upload

github.com/BioJulia/BioMakie.jl - 432c3fb42bc77df4d40652742fdcf1c8d3473469 authored about 3 years ago by Dan Kool <[email protected]>
Add files via upload

github.com/BioJulia/BioMakie.jl - 3d3fc7b45acc61768046a201dff67fee6c2a6ce6 authored about 3 years ago by Dan Kool <[email protected]>
Update README.md

github.com/BioJulia/PopGenCore.jl - 838116a1ccccc47ac372f36b12c094ad6b511d50 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Delete popgenio.png

github.com/BioJulia/PopGenCore.jl - 6255e7827ae39d3bdddc1443e5e035fb31558c95 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Add files via upload

github.com/BioJulia/PopGenCore.jl - 51130efd6f2fa6f417772ba99f8f2074d4885586 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update README.md

github.com/BioJulia/PopGenCore.jl - 48527ac92877769c008a03ff879a24b699a122cf authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update PopGenCore.jl

github.com/BioJulia/PopGenCore.jl - ba518ce87eb234775da9fed33bcc353b8535ca8b authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update Project.toml

github.com/BioJulia/PopGenCore.jl - b3c4996257ff0577762b346aa9401a53bac16859 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update types.jl

github.com/BioJulia/PopGenCore.jl - 6c026391c772c5a3a55c69480f14c23c061e4dce authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update io.jl

github.com/BioJulia/PopGenCore.jl - c6de2e0ac184fff3749370ec736b5a7bb26a04ad authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update runtests.jl

github.com/BioJulia/PopGenCore.jl - dfc0b93735238a087be67b7f8b6189f158dc9b6b authored about 3 years ago by Pavel V. Dimens <[email protected]>
Rename PopGenIO.jl to PopGenCore.jl

github.com/BioJulia/PopGenCore.jl - c02b4a65ef4205a400659188fec8f64c7422047e authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update README.md

github.com/BioJulia/PopGenCore.jl - fa21c0ac4c0a51e2115f04632b4008408a6c72af authored about 3 years ago by Pavel V. Dimens <[email protected]>
rename to PopGenCore

github.com/BioJulia/PopGenCore.jl - 62294b29dc627cb85132ffec8851f3998d72d14f authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update ci_dev.yaml

github.com/BioJulia/PopGenCore.jl - 63fea2e85b07f08986ed3bc1db997e1806fa5403 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Merge branch 'master' of https://github.com/kool7d/BioMakie.jl into master

github.com/BioJulia/BioMakie.jl - 617dabf86612eab3e0f3bb01962719815bd474e4 authored about 3 years ago by kool7d <[email protected]>
fixviz

github.com/BioJulia/BioMakie.jl - 9952df86b3ab048f7512d41a8db5ace477a8d3c2 authored about 3 years ago by kool7d <[email protected]>
Create Documenter.yml

github.com/BioJulia/BioMakie.jl - 73b8fee7e59b8f888c961b2bf919585e9e24fb4a authored about 3 years ago by Dan Kool <[email protected]>
upall2

github.com/BioJulia/BioMakie.jl - 270c669e9753dbaf63ed519082e58d80e5d4cfee authored about 3 years ago by kool7d <[email protected]>
Merge branch 'master' of https://github.com/kool7d/BioMakie.jl into master

github.com/BioJulia/BioMakie.jl - 9607bccd663396af1b58995c75b89047dfd369ed authored about 3 years ago by kool7d <[email protected]>
upall

github.com/BioJulia/BioMakie.jl - c13865fd00ee74af5f24b1253f14c163634bba65 authored about 3 years ago by kool7d <[email protected]>
add compat entries

github.com/BioJulia/PopGenCore.jl - 7136057140bb7d239a945f5a1e8a48db62b6bb9f authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update README.md

github.com/BioJulia/PopGenCore.jl - 1618fc7754baa57aa84df0c5ead568e39ff49e7a authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update README.md

github.com/BioJulia/PopGenCore.jl - cd82144bc7689a3980b5653dd4636daa065009db authored about 3 years ago by Pavel V. Dimens <[email protected]>
attempt to update VCF

github.com/BioJulia/PopGenCore.jl - c2efd631096f2adbf2e68df7d0346c431dd230d6 authored about 3 years ago by Pavel Dimens <[email protected]>
disable vcf test (needs fixing)

github.com/BioJulia/PopGenCore.jl - 7b93d1143317a6b6e4f8d1f9fab2353f1eae36fb authored about 3 years ago by Pavel Dimens <[email protected]>
rename and update branch

github.com/BioJulia/PopGenCore.jl - 969bf3a403ce91598be42042260a7690f386a6ed authored about 3 years ago by Pavel Dimens <[email protected]>
fix vxf

github.com/BioJulia/PopGenCore.jl - aaece3dc43711efa723b3f6603e014b19d8a059a authored about 3 years ago by Pavel Dimens <[email protected]>
fix io tests

github.com/BioJulia/PopGenCore.jl - 05e254047c5ab1ff09107d1e316d05b39d671991 authored about 3 years ago by Pavel Dimens <[email protected]>
fix datasets

github.com/BioJulia/PopGenCore.jl - 9d40b8ef9bb5cbd9167915a7219371197584c2b2 authored about 3 years ago by Pavel Dimens <[email protected]>
rm precompile()

github.com/BioJulia/PopGenCore.jl - 7eed7832f94c09b9ab5c9ee9b56c15a7e45549c0 authored about 3 years ago by Pavel Dimens <[email protected]>
add some precompilation

github.com/BioJulia/PopGenCore.jl - 0c8bdbb6d1c6327988370976501f7971bd47ca7d authored about 3 years ago by Pavel Dimens <[email protected]>
move loci to PopGenIO

github.com/BioJulia/PopGen.jl - 92eb6eeb0818a4f044780ceeac3f98cae5ec4669 authored about 3 years ago by Pavel Dimens <[email protected]>
fix datasets

github.com/BioJulia/PopGenCore.jl - 32815afdf95785a92f4132038be898d50d118527 authored about 3 years ago by Pavel Dimens <[email protected]>
add generate_meta to utls

github.com/BioJulia/PopGenCore.jl - 82841da584387539f371b4e56cafcbf35c88007a authored about 3 years ago by Pavel Dimens <[email protected]>
fix pkgname in tests

github.com/BioJulia/PopGenCore.jl - 8b5359bd7f880c38234ca5f62dd9ee2c976745a0 authored about 3 years ago by Pavel Dimens <[email protected]>
fix module

github.com/BioJulia/PopGenCore.jl - 5511548919e6a73c7cec04b2dd96fa88a9775633 authored about 3 years ago by Pavel Dimens <[email protected]>
update main

github.com/BioJulia/PopGenCore.jl - b3e7b6935e9954a6436c0abb18cd1d5aaf224246 authored about 3 years ago by Pavel Dimens <[email protected]>
rename runtests

github.com/BioJulia/PopGenCore.jl - 1cd08fcdbee54e6e4cf6c3f6f55b84d08a9d736d authored about 3 years ago by Pavel Dimens <[email protected]>
Merge branch 'main' of https://github.com/BioJulia/PopGenIO.jl

github.com/BioJulia/PopGenCore.jl - 0b53b8c58f5617bfa7d6bf9b49bfae918c575d93 authored about 3 years ago by Pavel Dimens <[email protected]>
update tests

github.com/BioJulia/PopGenCore.jl - c779575c4c0802b442b8239c83e4c3461f925c94 authored about 3 years ago by Pavel Dimens <[email protected]>
Delete Manifest.toml

github.com/BioJulia/PopGenCore.jl - 5e07d7c42a26dca26451ec45a42cb515c8832bbe authored about 3 years ago by Pavel V. Dimens <[email protected]>
tweak syntax

github.com/BioJulia/PopGenCore.jl - 809d204424f2123a7ae70ffe9beb0b13c4e898f7 authored about 3 years ago by Pavel Dimens <[email protected]>
add gitignore

github.com/BioJulia/PopGenCore.jl - 0aa965f9e737e6a3f884860f0dcda96886c5f2b1 authored about 3 years ago by Pavel Dimens <[email protected]>
rm RandomNumbers from Tests project.toml

github.com/BioJulia/PopGen.jl - c60cf3bf13e310a4735bd015fdc72105d41b9dc6 authored about 3 years ago by Pavel Dimens <[email protected]>
Merge branch 'main' of https://github.com/BioJulia/PopGenIO.jl

github.com/BioJulia/PopGenCore.jl - bd18332a1aa39003a06318e0883551c17bbb71db authored about 3 years ago by Pavel Dimens <[email protected]>
add Requires and tests

github.com/BioJulia/PopGenCore.jl - abf40db28f6cc8cc0a6666a9d0f4ff94abbeff5e authored about 3 years ago by Pavel Dimens <[email protected]>
Update ci_dev.yaml

github.com/BioJulia/PopGenCore.jl - a42aa70edb86241d06de1a1b2611595b86f5cf59 authored about 3 years ago by Pavel V. Dimens <[email protected]>
move utils

github.com/BioJulia/PopGenCore.jl - 4d2f9d04bc292dc5e8f8354bf18b581789bb2b20 authored about 3 years ago by Pavel Dimens <[email protected]>
migrate types and IO from popgen.jl

github.com/BioJulia/PopGenCore.jl - 380016e2e68e9777f75041f809d5a0872b130e1c authored about 3 years ago by Pavel Dimens <[email protected]>
more package instantiation

github.com/BioJulia/PopGenCore.jl - 52b9c4320f984834c895244382ee6b3e36c2c026 authored about 3 years ago by Pavel Dimens <[email protected]>
update readme

github.com/BioJulia/PopGenCore.jl - ab3317b565d82932465053c2b7cf7342ac5dd6e9 authored about 3 years ago by Pavel Dimens <[email protected]>
instantiate package

github.com/BioJulia/PopGenCore.jl - 4fec03b7844660f1658ee77085b25c51ef71a7d5 authored about 3 years ago by Pavel Dimens <[email protected]>
Update README.md

github.com/BioJulia/PopGenCore.jl - bf877e79ee6f01b647a17687c66c23195d6d2634 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Delete tmp

github.com/BioJulia/PopGenCore.jl - fd409fa09f758545e5e297c1223a4684406bca72 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Add files via upload

github.com/BioJulia/PopGenCore.jl - ca0931b3591ee95d97121e19e537c529f16967d1 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Create tmp

github.com/BioJulia/PopGenCore.jl - 3e2532b74bcfe10db1bb8683c1894efbd0cf084e authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update README.md

github.com/BioJulia/BioMakie.jl - aee6636a7d241ac85b53bf5f20fe5858bfafd42a authored about 3 years ago by Dan Kool <[email protected]>
downloader1

github.com/BioJulia/BioMakie.jl - 8cd927e0a5752381ef20390dc0beee64ec1f2ab2 authored about 3 years ago by kool7d <[email protected]>
Merge remote-tracking branch 'refs/remotes/origin/master'

Conflicts:
.vscode/biostuff.code-workspace

github.com/BioJulia/BioMakie.jl - 90a34fc7bfe14c1ed0fcde19ae8aa5d28efb097b authored about 3 years ago by kool7d <[email protected]>
Initial commit

github.com/BioJulia/PopGenCore.jl - a7a3289060ec3bae279a241b94eea0c7d0acdf29 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update README.md

github.com/BioJulia/BioMakie.jl - 8d3046e86af8b2f4cbfba8cc35a78767ee5e7007 authored about 3 years ago by Dan Kool <[email protected]>