Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

BioJulia

Bioinformatics and Computational Biology in Julia
Collective - Host: opensource - https://opencollective.com/biojulia - Website: https://biojulia.net - Code: https://github.com/BioJulia

add locus-by-locus methods

github.com/BioJulia/PopGen.jl - bd416e02b801281e4345dd29438dc5025d16d597 authored about 3 years ago by Pavel Dimens <[email protected]>
add feature req

github.com/BioJulia/PopGen.jl - 10ef4e8a4082954d0dfcacb14f0c89b806658add authored about 3 years ago by Pavel Dimens <[email protected]>
update .loci ref

github.com/BioJulia/PopGen.jl - 103d0ebbfad41968e2f14335bb91719479f91204 authored about 3 years ago by Pavel Dimens <[email protected]>
update .loci ref

github.com/BioJulia/PopGenCore.jl - 3dfa7c45c86ed6edd06a031b880d7b211079e632 authored about 3 years ago by Pavel Dimens <[email protected]>
Update Project.toml

github.com/BioJulia/PopGenCore.jl - 56212ade82b3a2fc38ab78141df884d6515d3405 authored about 3 years ago by Pavel V. Dimens <[email protected]>
rm allele freq remnants

github.com/BioJulia/PopGen.jl - 7eeeb1ca1cc273cd16948094877046d2c8700066 authored about 3 years ago by Pavel Dimens <[email protected]>
Update PopGen.jl

github.com/BioJulia/PopGen.jl - 8164b4f6a2e207c3987ecc59c6faabebdc58ccc6 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update Project.toml

github.com/BioJulia/PopGen.jl - f3c732366b5e4eea443b2d85520b4a199d0594e6 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update Project.toml

github.com/BioJulia/PopGenCore.jl - d061e79daa64e35861f49b94f216af65d14cff0e authored about 3 years ago by Pavel V. Dimens <[email protected]>
update compat to recent vers

github.com/BioJulia/PopGen.jl - 8dca506176b138fc09d6c470a3873abff6a91abf authored about 3 years ago by Pavel Dimens <[email protected]>
migrate advanced allelefreq tests

github.com/BioJulia/PopGenCore.jl - 820e4996b9f8ba3d81fd3728af43f3b01ac078f1 authored about 3 years ago by Pavel Dimens <[email protected]>
migration of AlleleFreq into Allele/GenoFreq.jl

github.com/BioJulia/PopGenCore.jl - 3840860aa361327a203300351bce06d4e8cb8e5f authored about 3 years ago by Pavel Dimens <[email protected]>
move AlleleFreq to Core.jl

github.com/BioJulia/PopGen.jl - e79b323e847fe4d0d270523166c7fbd09d8f9d8d authored about 3 years ago by Pavel Dimens <[email protected]>
change iteration logic

github.com/BioJulia/PopGenCore.jl - a7ad9287032cf471ae541ea4e2e4255e91b07175 authored about 3 years ago by Pavel Dimens <[email protected]>
typo

github.com/BioJulia/PopGenCore.jl - 86442a98b0181cce42b6ecbde9ef5aa4d95acc2a authored about 3 years ago by Pavel Dimens <[email protected]>
Update conditionals.jl

github.com/BioJulia/PopGenCore.jl - 28ff66fa82f3513d2d73af02583db9df22219aea authored about 3 years ago by Pavel V. Dimens <[email protected]>
update tests, bump version

github.com/BioJulia/PopGenCore.jl - 8cdb424872495feb8ef7f42ca03d82de67731ea5 authored about 3 years ago by Pavel Dimens <[email protected]>
ishom/ishet return false if missing. add _ishxx() methods

github.com/BioJulia/PopGenCore.jl - 4b4f3310f9995b9b517e0f15818a6286550acb98 authored about 3 years ago by Pavel Dimens <[email protected]>
remove coordinates in show()

github.com/BioJulia/PopGenCore.jl - f5eb43cafb284a0fa3cbb92122b92da637cdc8cd authored about 3 years ago by Pavel Dimens <[email protected]>
Merge branch 'dev' of https://github.com/BioJulia/PopGenCore.jl into dev

github.com/BioJulia/PopGenCore.jl - dc2e6565ef7e0dac68ce0810106ce29620ad4b02 authored about 3 years ago by Pavel Dimens <[email protected]>
hopefully fix dep

github.com/BioJulia/PopGenCore.jl - f8d3164d3a3dc6da43b6f502c8141e4c3140b0bc authored about 3 years ago by Pavel Dimens <[email protected]>
restrict compat

github.com/BioJulia/PopGen.jl - 5588a655bb8bea93e178ca174a30bc598d056982 authored about 3 years ago by Pavel Dimens <[email protected]>
Update Project.toml

github.com/BioJulia/PopGenCore.jl - cd9bcece14d053ba57296369a46a8360e4df433e authored about 3 years ago by Pavel V. Dimens <[email protected]>
add PopDataInfo! constructor

github.com/BioJulia/PopGenCore.jl - 3950d48b86338070be427a2a438be5489293049b authored about 3 years ago by Pavel Dimens <[email protected]>
fix indexing, add tests

github.com/BioJulia/PopGenCore.jl - 064395924db1e985149fee741a6413f7bd65b2d6 authored about 3 years ago by Pavel Dimens <[email protected]>
add more exports

github.com/BioJulia/PopGen.jl - c269fbb4f074b0065c5eabfbf8825fd4872e6fa8 authored about 3 years ago by Pavel Dimens <[email protected]>
add nightly to CI

github.com/BioJulia/PopGenCore.jl - 59e799701ae5847c7ff869e1986ab5d8917757c5 authored about 3 years ago by Pavel Dimens <[email protected]>
Merge branch 'dev' of https://github.com/pdimens/PopGen.jl into dev

github.com/BioJulia/PopGen.jl - 58d3c783c23116ad327ea56d15494112d4a234e1 authored about 3 years ago by Pavel Dimens <[email protected]>
more reexport statements

github.com/BioJulia/PopGen.jl - edae35abc89be1a1f91cbb29b6eac94dd22cd3ae authored about 3 years ago by Pavel Dimens <[email protected]>
temporarily rm precompilation

github.com/BioJulia/PopGenCore.jl - 54d370ce38e8eb66bdf408d0d216f85e35a3cecc authored about 3 years ago by Pavel Dimens <[email protected]>
update julia compat

github.com/BioJulia/PopGenCore.jl - cb5e45fe472a4406cf0b945a9974a8246146f611 authored about 3 years ago by Pavel Dimens <[email protected]>
Merge pull request #90 from BioJulia/compathelper/new_version/2021-10-13-00-39-32-690-01244245393

CompatHelper: add new compat entry for Reexport at version 1, (keep existing compat)

github.com/BioJulia/PopGen.jl - 2e1f17ff6059ca731a8b059bdfeb45033485080f authored about 3 years ago by Pavel V. Dimens <[email protected]>
Merge pull request #91 from BioJulia/compathelper/new_version/2021-10-13-00-39-45-776-02443049024

CompatHelper: add new compat entry for PopGenCore at version 0.2, (keep existing compat)

github.com/BioJulia/PopGen.jl - d70c6e80d7f92cbd7d1594c52e76bee67a969f8f authored about 3 years ago by Pavel V. Dimens <[email protected]>
CompatHelper: add new compat entry for PopGenCore at version 0.2, (keep existing compat)

github.com/BioJulia/PopGen.jl - 6efacef6e0f9d4ca6164b8163a6bfc6773571553 authored about 3 years ago by CompatHelper Julia <[email protected]>
CompatHelper: add new compat entry for Reexport at version 1, (keep existing compat)

github.com/BioJulia/PopGen.jl - 2d9f2f0cc5d93808a622d30860cfba76ab513ba5 authored about 3 years ago by CompatHelper Julia <[email protected]>
CompatHelper: add new compat entry for BioSequences at version 2, (keep existing compat)

github.com/BioJulia/Kmers.jl - ed4c50325933886f5550432d9e3974cfd4e1d16c authored about 3 years ago by CompatHelper Julia <[email protected]>
import LongSequence into tests

github.com/BioJulia/Kmers.jl - 53e7eae0c26c6078e61eafa607c9e56f38c99d8d authored about 3 years ago by Ben J. Ward <[email protected]>
Update pkgtests.yaml

github.com/BioJulia/PopGen.jl - 0331af5ecb9866e203d0a34e7cbec589c8b23bb3 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Rename ci_dev.yaml to pkgtests.yaml

github.com/BioJulia/PopGen.jl - 1bb1cd4e4740f6c05129ee9e909a59fd4e3648bc authored about 3 years ago by Pavel V. Dimens <[email protected]>
fix samples refrence

github.com/BioJulia/PopGen.jl - 5b184445fdc503fd7774bd0a3380b634af90e3a4 authored about 3 years ago by Pavel Dimens <[email protected]>
fix iterable indexing

github.com/BioJulia/PopGen.jl - 1c46c82e65dbac59e928528ec01f2ee04e93bb66 authored about 3 years ago by Pavel Dimens <[email protected]>
Fix typo

github.com/BioJulia/Kmers.jl - 7e7215fcd6d5c66a50f546517cc1967165f45dc6 authored about 3 years ago by Ben J. Ward <[email protected]>
reexport alphabets

github.com/BioJulia/Kmers.jl - a3dd98ab81b7565f490dbf330de1bf07e653de3f authored about 3 years ago by Ben J. Ward <[email protected]>
Add random functios for testing

github.com/BioJulia/Kmers.jl - aa407055daeb6fb3a07d3183eee715550129ba27 authored about 3 years ago by Ben J. Ward <[email protected]>
overlooked typo

github.com/BioJulia/PopGen.jl - c63240cf499147ca696fe9540edfdeb7dd63f8a9 authored about 3 years ago by Pavel Dimens <[email protected]>
Require BioSequences branch v3

github.com/BioJulia/Kmers.jl - b0480d20ae28f1fe9f88eef03ffc0524f2ec3845 authored about 3 years ago by Ben J. Ward <[email protected]>
change n finding

github.com/BioJulia/PopGen.jl - 9a29445f799fe52c0ce16f8309311ace3a042b3a authored about 3 years ago by Pavel Dimens <[email protected]>
change n finding

github.com/BioJulia/PopGen.jl - f97395894de3705b0fb08faab62dfcd5cc4fe88f authored about 3 years ago by Pavel Dimens <[email protected]>
Add construction manual page

github.com/BioJulia/Kmers.jl - 8a34add2f24fe156cc5edf894246cfbae0fff55e authored about 3 years ago by Ben J. Ward <[email protected]>
updated function signature

github.com/BioJulia/PopGen.jl - 632e334b20b1f3800f5dff4c600f8adbd580b470 authored about 3 years ago by Pavel Dimens <[email protected]>
more test updates

github.com/BioJulia/PopGen.jl - 06e3c1904af952fca55f3bd38552c1287f575b52 authored about 3 years ago by Pavel Dimens <[email protected]>
Add index.md

github.com/BioJulia/Kmers.jl - 76bcda75a48c9ec3ff913f022d631658b0754b4c authored about 3 years ago by Ben J. Ward <[email protected]>
Fix docs folder

github.com/BioJulia/Kmers.jl - 680105bc5b90a08e5fe62e99eb22314ebdbe2de3 authored about 3 years ago by Ben J. Ward <[email protected]>
update tests

github.com/BioJulia/PopGen.jl - 3993fdc3050c9d47d2334b09243ddcca0a0a43e4 authored about 3 years ago by Pavel Dimens <[email protected]>
update tests

github.com/BioJulia/PopGen.jl - aa50bdd8f72fad439eda145523bb04b6e48bfcf6 authored about 3 years ago by Pavel Dimens <[email protected]>
Added some docs files

github.com/BioJulia/Kmers.jl - 5b42af5c33d59e9a91c67b9276a28660d83b74a1 authored about 3 years ago by Ben J. Ward <[email protected]>
Update readme

github.com/BioJulia/Kmers.jl - 5bf6ec69311a96baf0bf5104eccfe4950406fa69 authored about 3 years ago by Ben J. Ward <[email protected]>
Merge code for Kmer type from BioSequences to this package (#8)

github.com/BioJulia/Kmers.jl - 9ebd425a3aea067f4e172a702b84020c5549c087 authored about 3 years ago by Ben J. Ward <[email protected]>
Update ci_dev.yaml

github.com/BioJulia/PopGen.jl - a35ed9540b8307b8aa3398977e6c5a6ac3fdcc92 authored about 3 years ago by Pavel V. Dimens <[email protected]>
Update Project.toml

github.com/BioJulia/PopGen.jl - 57ccb60fb47edbef43fad445e8c0300473637987 authored about 3 years ago by Pavel V. Dimens <[email protected]>
compat fix

github.com/BioJulia/PopGen.jl - 072072485790ad3ce4f106f1f980e12996dd929b authored about 3 years ago by Pavel Dimens <[email protected]>
rm Requires mention

github.com/BioJulia/PopGen.jl - 66af293723982adf94e2629962dfb95ba2ba91c6 authored about 3 years ago by Pavel Dimens <[email protected]>
big move to popgencore

github.com/BioJulia/PopGen.jl - b52d961afcab5226f0caf9beb707cf09a53085b3 authored about 3 years ago by Pavel Dimens <[email protected]>
Merge pull request #382 from kool7d/dev

Dev

github.com/BioJulia/BioMakie.jl - c78399354405300d54e24b3e4dc89002f672964a authored about 3 years ago by Dan Kool <[email protected]>
Merge branch 'dev' of https://github.com/kool7d/BioMakie.jl into dev

github.com/BioJulia/BioMakie.jl - f09e7b1f3f0996aa8a1b907fd1a65b36b4c059db authored about 3 years ago by kool7d <[email protected]>
dox4

github.com/BioJulia/BioMakie.jl - b1d23204c4f291f883ff892a0d47510be60fa67b authored about 3 years ago by kool7d <[email protected]>
CompatHelper: add new compat entry for DocumenterTools at version 0.1, (keep existing compat)

github.com/BioJulia/BioMakie.jl - 76565e5d8c480f9789650762d56b8123990f3c0d authored about 3 years ago by CompatHelper Julia <[email protected]>
Update Documenter.yml

github.com/BioJulia/BioMakie.jl - b3f053494b4f47ae50feec38f95f1e826c0d7eb8 authored about 3 years ago by Dan Kool <[email protected]>
Merge pull request #380 from kool7d/master

merg

github.com/BioJulia/BioMakie.jl - d2d8e3faf6175ff73706c24f24ee518f3fc2fbae authored about 3 years ago by Dan Kool <[email protected]>
Merge pull request #379 from kool7d/dev

Dev

github.com/BioJulia/BioMakie.jl - ca8256f7f7f268a688730d4bfd662d3f37965890 authored about 3 years ago by Dan Kool <[email protected]>
dox2

github.com/BioJulia/BioMakie.jl - 02d4904d1580ee62d5adda3ec40fe3f283e5cb3a authored about 3 years ago by kool7d <[email protected]>
dox1

github.com/BioJulia/BioMakie.jl - 0d5aa87c7784bd4bc5124b63ee33a7fb03de4adc authored about 3 years ago by kool7d <[email protected]>
Merge pull request #378 from kool7d/dev

Dev

github.com/BioJulia/BioMakie.jl - 8f391aeda1d1135cf0cac5f07f9fc9f393e18dea authored about 3 years ago by Dan Kool <[email protected]>
del3

github.com/BioJulia/BioMakie.jl - d857246c369af2796feb641691c6588cd129ca54 authored about 3 years ago by kool7d <[email protected]>
del2

github.com/BioJulia/BioMakie.jl - 2edf526f8f17d5844cb00884c7fdb187b115312d authored about 3 years ago by kool7d <[email protected]>
del1

github.com/BioJulia/BioMakie.jl - f4d5c1cd3e235b75ca7ab8d80ddd1c505082b8a3 authored about 3 years ago by kool7d <[email protected]>
Merge pull request #377 from kool7d/dev

Dev

github.com/BioJulia/BioMakie.jl - 707e7f937be376a6bd31b4870d5f8438fe0a57ee authored about 3 years ago by Dan Kool <[email protected]>
Merge pull request #374 from kool7d/compathelper/new_version/2021-09-10-00-55-32-371-04155581297

CompatHelper: bump compat for Pluto to 0.16, (keep existing compat)

github.com/BioJulia/BioMakie.jl - fd461e5af5e46461880ade784d80e58cba6cde66 authored about 3 years ago by Dan Kool <[email protected]>
Merge pull request #376 from kool7d/compathelper/new_version/2021-09-28-00-54-05-156-00928160369

CompatHelper: bump compat for MolecularGraph to 0.11, (keep existing compat)

github.com/BioJulia/BioMakie.jl - d4c0d1cd0472440ecff9b2b64dea53af4d6f9ebb authored about 3 years ago by Dan Kool <[email protected]>
Merge pull request #375 from kool7d/dependabot/github_actions/codecov/codecov-action-2.1.0

Bump codecov/codecov-action from 2.0.3 to 2.1.0

github.com/BioJulia/BioMakie.jl - 2f7066b547e2abf21fc38f5ffd3ca5885712c86d authored about 3 years ago by Dan Kool <[email protected]>
Update Documenter.yml

github.com/BioJulia/BioMakie.jl - d6054ba24bf5d67397e91aa764d715415924b82b authored about 3 years ago by Dan Kool <[email protected]>
Update Documenter.yml

github.com/BioJulia/BioMakie.jl - 4c965301707d42713631d7f5a88caa6c7fe224fa authored about 3 years ago by Dan Kool <[email protected]>
site3

github.com/BioJulia/BioMakie.jl - 1a7ced7db9acc348920b4eb377302bfaf4e51fef authored about 3 years ago by kool7d <[email protected]>
site2

github.com/BioJulia/BioMakie.jl - a26ced8e1c1edffa1c4533e4e600d90fe7f4a705 authored about 3 years ago by kool7d <[email protected]>
site1

github.com/BioJulia/BioMakie.jl - 1ef8b5af142bb4396f72384eafca6e685189d59d authored about 3 years ago by kool7d <[email protected]>
Create servedocs

github.com/BioJulia/BioMakie.jl - 6b94a842e4e89fbdcb6498894c324141b3b5dd67 authored about 3 years ago by Dan Kool <[email protected]>
Remove dependency on StableRNGs (#188)

Remove StableRNGs from dependencies.
Methods for LongSequence generation now default to using R...

github.com/BioJulia/BioSequences.jl - 9e6460f038565664ba07a8dcfd2abafd6711f317 authored about 3 years ago by Jakob Nybo Nissen <[email protected]>
Update Project.toml

github.com/BioJulia/PopGenCore.jl - 635aaa8d97d6f8378ce8c2766f7da22e8c4bf592 authored about 3 years ago by Pavel V. Dimens <[email protected]>
update groupby [bugfix]

github.com/BioJulia/PopGenCore.jl - 03b4fa91e284825a502fa21996c21b73b05fb45f authored about 3 years ago by Pavel Dimens <[email protected]>
Aqua test not recursive

github.com/BioJulia/BioStructures.jl - d1fc832a605b07438ae2edd3a18d5a7a1a35c5b4 authored about 3 years ago by Joe Greener <[email protected]>
CompatHelper: bump compat for MolecularGraph to 0.11, (keep existing compat)

github.com/BioJulia/BioMakie.jl - b93944203c3f80a522038c4111d2ad31ce04be43 authored about 3 years ago by CompatHelper Julia <[email protected]>
population => populations in tests

github.com/BioJulia/PopGenCore.jl - 32775b5d32f93499ba8af78347ae5f97eda657cf authored about 3 years ago by Pavel Dimens <[email protected]>
fix @test_throws

github.com/BioJulia/PopGenCore.jl - 47bc600dc5a48b1309bd639da6f5c68e36354c23 authored about 3 years ago by Pavel Dimens <[email protected]>
update get_geno tests

github.com/BioJulia/PopGenCore.jl - 4cb02efa0fab470812b018437f54d60e5fa96f25 authored about 3 years ago by Pavel Dimens <[email protected]>
update manipulation

github.com/BioJulia/PopGenCore.jl - aa7d8cd7310b12b3f1a3eae73389a670e2ea2ad4 authored about 3 years ago by Pavel Dimens <[email protected]>
update tests

github.com/BioJulia/PopGenCore.jl - 160751692ea93b8f11871b923eeb09151baae8f3 authored about 3 years ago by Pavel Dimens <[email protected]>
replace add_meta!

github.com/BioJulia/PopGenCore.jl - 2d22a00d9bb7ecaaaaef8219ff43464c93ef8a70 authored about 3 years ago by Pavel Dimens <[email protected]>
fixes for things unit tests discovered

github.com/BioJulia/PopGenCore.jl - 9cb7104d672d45ba27149526e7086574d99083d3 authored about 3 years ago by Pavel Dimens <[email protected]>
fix typo

github.com/BioJulia/PopGenCore.jl - 2675cefb9d66c3e20af24c8eb501272686803842 authored about 3 years ago by Pavel Dimens <[email protected]>
update metadata calls

github.com/BioJulia/PopGenCore.jl - 0837ef4c7af806ef94dd5c9ed3e1e0ce6c0c75c1 authored about 3 years ago by Pavel Dimens <[email protected]>