github.com/radis/radis commits | Ecosyste.ms: OpenCollective

fix compare_torch_CO2 (failure since not using 'nm' by default in get() )

add has_nan util function to test spectra

ddc9ee3466aeefc2d20869f9cade9ad79dc41223 authored almost 4 years ago

more abstract above/below check mechanism for cache files

Revert "update wavenum_min/max check in cache file"

This reverts commit 3c31204402990585a5be366...

5885244baee24627d79e3ae623fb0fec8de85b19 authored almost 4 years ago

clean code: move db_use_cached at load/fetch_databank level

f9ebe255da06ad92132c578fb176e5f5de3e6306 authored almost 4 years ago

update wavenum_min/max check in cache file

3c31204402990585a5be366fcece43f1911ea331 authored almost 4 years ago

deprecate .npy direct loading (worked only at equilibrium, less convenient than HDF5)

remove 'h5' buffer during load_and_concat of many lines : MemoryErrors are avoided by other means...

69b866370f19317c5fb1eb7665c3b212538d9844 authored almost 4 years ago

fix some tests, variable renaming

215da57ce0e4d367b7c03a331c18216da9b62e3f authored almost 4 years ago

compute spectra directly by using calc_spectrum(..., databank='hitemp') or SpectrumFactory.fetch_databank('hitemp')

also introduce warning level to discard some warnings when verbose=False

f7420c033593a016ad0812c1006612bee1757e53 authored almost 4 years ago

able to compute spectra directly from generated radisdb/*.h5 files

add tests

e39072556fcba6fb8c08224631ad10b2861ec988 authored almost 4 years ago

add @CorentinGrimaldi 's 'only load relevant wavenum'

feature interface to directly HDF5 loading

5c4af58af416aa331b89da361d46a0cf224159d9 authored almost 4 years ago

Merge remote-tracking branch 'origin/feature/improved-database-loading' into feature/improved-database-loading

add @CorentinGrimaldi 's 'only relevant wavenumber load feature'
interface to direct HDF5 loading

87aceb5cedb7df54afe4a46463cd38936d0018af authored almost 4 years ago

read HDF5 metadata to Pandas dataframe automatically

add databases in ~/.radis config file
do-not redownload HDF5 if exists
add 'regen' mode to HITRAN...

0ff6c1b51d681d3d6db84cb7044ff5ca8f303447 authored almost 4 years ago

(wip) add metadata

2f05fcb02e729b71874e638b99bfe194c27a9dbd authored almost 4 years ago

fix last chunk of lines not properly parsed.

22e3f03b9d669244dbdfe3c29a513c3aa9909356 authored almost 4 years ago

(wip) auto-fetch HITEMP. 1st working example, still missing lines from last chunk.

0f0907545a9d7944c3813d5a779ad86444d4cc54 authored almost 4 years ago

fix HITRAN query, update error msg

40979ab9aca7b6f0f191b1cda96a7540617b1396 authored almost 4 years ago

first working example loading all the HDF5 directly

42f7f080586db9bc18161bc7103cac24beef8e44 authored almost 4 years ago

read HDF5 metadata to Pandas dataframe automatically

add databases in ~/.radis config file
do-not redownload HDF5 if exists
add 'regen' mode to HITRAN...

93a50c4e223bcff3878ebd924830597a267da7bf authored almost 4 years ago

Merge pull request #185 from CorentinGrimaldi/develop

Faster rejection of irrelevant files reading metadata
No more db_assume_sorted option
https://...

8bc75c80683829b5d67e4b1319db4b4b98ac7c74 authored almost 4 years ago

Removed "db_assume_sorted" parameter, useless now.

Increase clarity of code when loading from a database.

e12adcf6edb37da044ab4b2605d284abb45e6139 authored almost 4 years ago

linting + add pytest.mark.fast marker to test_loader.py

0456cdfc8fd3052d052a9046574eef6bda685cd7 authored almost 4 years ago

(wip) add metadata

73310e3c97105f955de37f31b8a6f9ff1278f628 authored almost 4 years ago

Add a test to determine if checking the wavenumbers is required or not (else an issue was generated when loading hdf5 file for Energy levels)

30a1ed57d4e8a1c252071c72fe4ebbf5ae0f0d1e authored almost 4 years ago

Clean the import since IrrelevantWarning are not used anymore

718f0478e62a9804f328f68ab14cbd6a477631aa authored almost 4 years ago

Uncomment tests

f9cb0547badb39eed383da579b570d4718b66731 authored almost 4 years ago

added a test for #185

fix some import errors in existing tests due to renaming DeprecatedFileWarning
enforce closing th...

e36c6ed880a71a3cbcf9df8f6bc1bca83c0376a4 authored almost 4 years ago

Merge branch 'develop' into develop

b4470b3c9a480bb901ad934359133f793e7ee0a0 authored almost 4 years ago

Cleaning v2

4379f6e7c0760525635685deabc93fdb12e6553f authored almost 4 years ago

Cleaning

194afda0e845b5626e7e320ba1e3c809ddcd90e0 authored almost 4 years ago

Better error messages when db_use_cached=='force', some cleanings

af87ec03fbe7262deb646129dca63e0213bc3120 authored almost 4 years ago

Add doc, move warnings from cache_files into warnings, better exceptions handling.

37bc86d6faa74b007178a679dde3170c26446a3f authored almost 4 years ago

Update radis/misc/cache_files.py

Co-authored-by: Erwan Pannier <[email protected]>

e6e00d7fde6231860dd5152b7d9f7f479486fac9 authored almost 4 years ago

Update radis/misc/cache_files.py

Co-authored-by: Erwan Pannier <[email protected]>

b4f41f7d06c551da3fe43c2b1d077ba5049cbff7 authored almost 4 years ago

Update radis/lbl/loader.py

Co-authored-by: Erwan Pannier <[email protected]>

cb2cd960a80471ebffd6b7daa173a4a54b72f67b authored almost 4 years ago

fix last chunk of lines not properly parsed.

d3ccf4a2356af5d6ba7dc3a15bfb12781078d90a authored almost 4 years ago

(wip) auto-fetch HITEMP. 1st working example, still missing lines from last chunk.

92366a7df26bd42f08e3925e523a883b459fd950 authored almost 4 years ago

first working example loading all the HDF5 directly

12cf3ff326f22f41aba3a863ebf0161b102d5ee7 authored almost 4 years ago

Merge pull request #192 from erwanp/improve-los-perfs

Improve LOS performances (SerialSlabs, etc.)

f99bd1a97301737de02d96ce7b8dd26601b1f096 authored about 4 years ago

Merge branch 'develop' into improve-los-perfs

26fe46506c8d9afe034b8b009e13c6ca54b68fd0 authored about 4 years ago

other minor imporvements :

- disable warning check on Spectrum creation at the end of SerialSlabs (already clean, and it sav...

4cdf82932959c4096e67ba9c84ac38de96150f2e authored about 4 years ago

introduce 'default' option for Spectrum.get(wunit='default')

/!\ change in user-interface. But will prevent from converting everything to wavelengths by defau...

3dc95328782c8fac6b6999fdef18301c80441ea6 authored about 4 years ago

in SerialSlabs, make sure checks are ran once per slab and not recursively. With large number of slabs (100+) up to 95% of the time was spent on checks !!

(also minor improvements, like no copy of lines during recopy of spectra.)

026180277845b9e8ecf5eafbf3f764417f47ecce authored about 4 years ago

Merge pull request #190 from dcmvdbekerom/develop_db

Fixing negative lineshapes

10ed992d9cb236fd4a1d5b3187cf18a1cad85fff authored about 4 years ago

Typo in doc

479d81e32e7f746c32a3b26b73b3909c43d62918 authored about 4 years ago

Fix zero padding to len(w) again

Zero padding is not working so removing it for now.
Should be relatively easy to fix though

352fa0b0711b154c7bdeb7ee1278cde25fadc801 authored about 4 years ago

Update broadening.py

Added zero padding back

fb14ffaee53749f31777d78caa3d7bbeb1268433 authored about 4 years ago

Update broadening.py

Updated DLM procedure by copying in a working version.
Changed order of v,L,G, to v,G,L

2b5a9f14d33bb95f4084b9f220039c1613a28853 authored about 4 years ago

use simple weights as default optimization

870ec12ebe23af0b89c0a5d0272b33b0cd36bff2 authored about 4 years ago

rebase

59043c180729939a37e054dd49a29dd8c38ba23f authored about 4 years ago

Added folding and zero_padding

Folding fixes oscilatory behavior when linewidth is approximately wstep as mentioned in https://...

47527354e7dc306e456689d61327c34e40bc597b authored about 4 years ago

Merge pull request #187 from erwanp/cleaning

Cleaning + remove old parallel features

6208417028b52173a185eb08f612aed7732d41c3 authored about 4 years ago

clean docs

dcc1666d19fe081c0561a173f1fa6d9886ae342c authored about 4 years ago

remove (unused) bplot option in SpectrumFactory

923cfa59ef619e1772d0482176c8e47ec65a01d5 authored about 4 years ago

remove ParallelFactory (class that copied a SpectrumFactory instance to Parallelize whole computations). Not needed since we're no more CPU-limited (but rather RAM limited) since 0.9.20

e29ae6725d2ff658dcba3fdef5c580c9aea03199 authored about 4 years ago

remove built-in CPU-parallel processing (not used since 0.9.20 : better switch to new algorithm for large number of lines)

1ca40e10b60ee9e0ebe3926b1898918728f36a6b authored about 4 years ago

clean docs

d04926f56b2484e9d6fc4885feb3196989a69a3b authored about 4 years ago

Loading amelioration, better check for relevancy. Related to #131

1b0d510d85e81f0cf5731a3fbfbeb070085ff6e7 authored about 4 years ago

linting

7f738847c9216f6a60f729cd74b743d4ae379070 authored about 4 years ago

Merge pull request #183 from erwanp/develop

add cutoff as calc_spectrum option / small docs updates

cac9d956d88f4be3010e54f2107a8b43e0f5d90c authored about 4 years ago

Merge remote-tracking branch 'origin/develop' into develop

968739b0db41fad4ad4de94b3fcd546f2387d85d authored about 4 years ago

show cutoff parameter in calc_spectrum so that the default value is explicit to the end-user

(docs) fix hitran-spectra syntax
more mentions of opacity

dfca0bea2f09e6a5840d54d70bf37ef9670e4f33 authored about 4 years ago

lint only master/develop branch

efd98e85b9021b6200eaebaae614e06a0e684b31 authored about 4 years ago

Merge pull request #178 from dcmvdbekerom/develop_db

Paper references in manual

6b350bec88cd5c2816dd556fe6fc1359c1718230 authored about 4 years ago

Update README.rst

additional commit to trigger pre-commit

621af5077b4be6fa8352093fcba53ada8e5ea4cb authored about 4 years ago

Update .pre-commit-config.yaml

3f2ece57fa835f7a513ae138cc556e9c5a2499d4 authored about 4 years ago

show cutoff parameter in calc_spectrum so that the default value is explicit to the end-user

(docs) fix hitran-spectra syntax
more mentions of opacity

9ec20ddbd437ca9fbde53022bc08553d9c546445 authored about 4 years ago

Update README.rst

d702c94d4fbef61e9c93b3deac4de04b8d0bec72 authored about 4 years ago

Merge branch 'develop' into develop_db

34f46c661889812b64a6ea7c0d8c11820e61c169 authored about 4 years ago

Merge pull request #168 from radis/develop

0.9.27. See https://github.com/radis/radis/pull/168

09636ce9a00f9d9b0250bd5ddc82e0f7615b72d9 authored about 4 years ago

Merge pull request #172 from erwanp/store-radis-versino-with-commit

store commit number in Spectrum too (if Git repo).

7afa817a7b79d9cc036552c0503677152df514b0 authored about 4 years ago

Merge pull request #171 from erwanp/clean-code

clean code

97c5f0d6ee6d4ab06d108666742e84325224b185 authored about 4 years ago

Merge pull request #175 from erwanp/compress-by-default

change default save/load mode of Spectrum to compress=True

7d63afcf28b062f8c5b3bc3090ccb77f9fc38a8a authored about 4 years ago

Merge remote-tracking branch 'origin/clean-code' into clean-code

360821aa86b4201e51fd02a180286897b11188d6 authored about 4 years ago

(docs) mention opacity when we talk about absorption coefficient [opacity is more often found in the astronomy community]

8aa9593dc7fa8f3c56574685f47f284f62f166a9 authored about 4 years ago

rewrote get_version() to show only the commit if a git repo, and no error message if not. Fix #169

a4c42e04c858bd8132c67c24a54495587c3392b7 authored about 4 years ago

change default save/load mode of Spectrum to compress=True (but not compress=2). Fixes #170

88c7696fc2cbe3039000b33e85bd9d0e8edc24b8 authored about 4 years ago

update docs

df9e6e142ea147d1c6fcbbc3efb4736ca3a735f0 authored about 4 years ago

Merge pull request #173 from erwanp/update-line-survey

update line survey to return Plotly fig object (for RADIS-lab)

19f17af56361afd9b3947af401620cfb2ca17a74 authored about 4 years ago

prepare version for 0.9.27

c90392022f70c659aaa5acd09769b40efdf12ee6 authored about 4 years ago

clean code

9e8e31e6d91bfdae9cdaf1ba228e406fd379e51b authored about 4 years ago

store commit number in Spectrum too (if Git repo). (we should handle #169 first)

5760dd2fa19b1dd81a882d8005607ff3ec156d58 authored about 4 years ago

update line survey to return Plotly fig object (for RADIS-lab)

5d755c6353807ddbe0830595294ecb6c117af776 authored about 4 years ago

clean code

d01aa719b161a302230e228ffd20ce346bd495cb authored about 4 years ago

Merge pull request #165 from erwanp/develop

add plot_by_parts option to plot()

6b608a1cea44c93544671ac5149bac26ca015edc authored about 4 years ago

added logo with dark background

added contour in case light is used with dark background or the other way round

51f476b577de25ae2d13d463a25372edc2e35031 authored about 4 years ago

(docs) make radis-online more visible

da93ff69b12281c5629c1461ad49b8600bd4600c authored about 4 years ago

(docs) make radis-online more visible

26104712c641dcaeaf6043cb4944288bdd5687ea authored about 4 years ago

(docs) mention radis-online & radis-lab

89acde6bcf73aa58f38c79ec0e3ba21aad71c665 authored about 4 years ago

add plot_by_parts option to plot()

look for discontinuities in the wavespace and plot the different parts without connecting lines. ...

b2efdd0c19a54a05b308f401f1623f71b1a79269 authored about 4 years ago

Merge pull request #163 from erwanp/develop

fix "cm_1" in units of Spectrum generated before 0.9.26

387f281b5b897d1d1d41f1d5599346d1dfb35b01 authored about 4 years ago

fix "cm_1" in units of Spectrum generated before 0.9.26

cc12c733a20cc886cd2cd7b16c216e80670e10c4 authored about 4 years ago

add asv benchmark badge

0414dda7805a00904c3cdcfe6b836bf584fc8a81 authored about 4 years ago

use the same line database for RADIS and HAPI in the radis_vs_hapi broadening validation case. Fixes #160

f0af1ed0fe6e855dd4aa25e54d90d015653c292d authored about 4 years ago

(docs) fix links and add url to CDSD-4000 partition functinos (related to #159)

618b41a7354141af2f90e152bc1d4a23d3044405 authored about 4 years ago

fix links in docs. Fix docstrings. Fixes #157

89f8ce22c2a16db6f2e62f8b7add38c1c35711b2 authored about 4 years ago

(docs) fix missing file

4ad25392d677537df9a9452c4dcb8376df11c99b authored about 4 years ago

Merge branch 'docs-hitran-spectra' into develop-upstream

167839526d22a8e25be19484b3016c63fb3d70ca authored about 4 years ago

move hitran-spectra in different file

a7c3872dcf82993f585b4d8675e3be3d5c24f2e8 authored about 4 years ago

(docs) add sectinos for hitran spectra

78bfed8b349687ea839efda6e0bef63eda2333ab authored about 4 years ago

improve docs

3ab107c10ad7ce613f7788ed1b92263f164b43a6 authored about 4 years ago

Add links to new paper

Takes a stab at https://github.com/radis/radis/issues/156

f9d63ef95c4ef69d3bfaff4a97b2bf84c7524106 authored about 4 years ago