github.com/radis/radis commits | Ecosyste.ms: OpenCollective

Merge pull request #644 from smitsekhadiaa/doc_changes

a322aa36f9cfffb93f13f069441f1a95ff866ece authored 10 months ago by Nicolas Minesi <[email protected]>

change hyperlink for TryOnline

a60741ca4b973f1db297f26fd99497a6993ee8e2 authored 10 months ago by Smit <[email protected]>

Merge branch 'radis:develop' into doc_changes

235dc36bfcb5191d35a5fbde4a0bc6731e0959eb authored 11 months ago by Smit Sekhadia <[email protected]>

changed hyperlink to spectroscopy video tutorial

65fddd91fbd990dc3115fbb5d3ba687988af808b authored 11 months ago by Smit <[email protected]>

Merge pull request #633 from radis/accelerate_travis

simple solution to accelerate potential halt of travis

7efb26b8a5e14a7fb94b9bd91d797f6728d43a0b authored 11 months ago by Nicolas Minesi <[email protected]>

Merge pull request #637 from radis/doc_cleaning

Reorganization and simplification of the doc

acee7bcf8bc9c3958930fe69344c16d85421f70e authored 11 months ago by Nicolas Minesi <[email protected]>

forgot a line to remove

745d0235eb1f7b0d0388327d26e4d018ba649531 authored 11 months ago by NicolasEM2C <[email protected]>

slight changes to README

f279613da1c69da9076c8433715fa70c067487ad authored 11 months ago by NicolasEM2C <[email protected]>

gave up with caption in toctree

2feab761949cfbe47aaf3a0925feb5356cbebbf0 authored 11 months ago by NicolasEM2C <[email protected]>

Merge pull request #642 from smitsekhadiaa/FixingRoundingErrorForMoleFractions

Solution to rounding issue while summing mole fractions

7818de16a5fa6da605d54211ea9bfbd8d5caf31b authored 11 months ago by Nicolas Minesi <[email protected]>

out-of-date example - vaex is now default and engine option removed

e90f91e767c9bbdd8c0ed4edd1954a975534cc64 authored 11 months ago by NicolasEM2C <[email protected]>

replace old "fit_spectrum" by "fit_legacy"

aaa05f77544b50e5529670dc47bdce408850d374 authored 11 months ago by NicolasEM2C <[email protected]>

Solution to rounding issue when summing mole fractions of molecule and diluents

f8ce7f2cf0a731720000ee98500778d203fc3be1 authored 11 months ago by Smit <[email protected]>

changed order of examples

c1e9e6ce3d909420255b72257765ba7cc7178341 authored 11 months ago by NicolasEM2C <[email protected]>

adjusted comments of the fitting methods

1f1a7142b5be41e8d62e9420d5e3f94989f6c497 authored 11 months ago by NicolasEM2C <[email protected]>

added minor comments and verbose adjust in 1T fits

ce68e946ad4f914891ff02865b7b9dcefee4ab99 authored 11 months ago by NicolasEM2C <[email protected]>

updated example to fit Voigts

5c5cc811a7c986cc36cae3c7f6a5bfb71925a46d authored 11 months ago by NicolasEM2C <[email protected]>

reorganize toctree

997186acf091d9a776c1ba0b3354005576780856 authored 11 months ago by NicolasEM2C <[email protected]>

minor edits in index

a399bd238852d29f0661a7d5e820c9d594167296 authored 11 months ago by NicolasEM2C <[email protected]>

remove duplicate CO

d021511c8c5548e51c873a8742cdbabb11a883e9 authored 11 months ago by NicolasEM2C <[email protected]>

merged two examples

fd3a74ea11cabf0fc9f36d68f67f0c2ef60f3767 authored 11 months ago by NicolasEM2C <[email protected]>

Merge pull request #641 from leroyvn/pandas_2

Make codebase Pandas 2.0-ready

1bdc08464d483d217edec0e835bd81b7f2ea2672 authored 11 months ago by Erwan Pannier <[email protected]>

updated features

30eab12316ed4c512a715caa1aca57b3c1783460 authored 11 months ago by NicolasEM2C <[email protected]>

update description

8aaef8a45aeb91532e8385956b392fbfb76cd2be authored 11 months ago by NicolasEM2C <[email protected]>

lbl doc and indicate continuum will be depreciated

c848028a46301d46f16254b2ca911296303582c7 authored 11 months ago by NicolasEM2C <[email protected]>

Make codebase Pandas 2.0-ready

3ea4606272a6d3cefd41f50614366a9a1089a783 authored 11 months ago by Vincent Leroy <[email protected]>

minor language adjustements

1fc85c5eb1cd500cd00f41759c2a83311a5d2d9e authored 12 months ago by NicolasEM2C <[email protected]>

Merge pull request #638 from sh-tada/fix-vaex-usage-exomolapi

Fix Vaex DataFrame usage with .extract() method

ab6d7dfa79d9bc19c6e02f471351f2912cb54cab authored 12 months ago by Nicolas Minesi <[email protected]>

Implement .extract() for filtered Vaex DataFrame in radis/api/hdf5.py

474b5a35fa3326f03227da3b657ec2e1b777607d authored 12 months ago by sh-tada <[email protected]>

Fix Vaex DataFrame handling in radis/api/exomolapi.py

eda6194bf5856677e67ad1cc38374769886a285b authored 12 months ago by sh-tada <[email protected]>

clean developer

c8fb79dd1bc6cc84bc7f7ef4c140a2c480c5d117 authored about 1 year ago by NicolasEM2C <[email protected]>

removed redondancy

d419c3d65e619becca779878aba44af31d21bb50 authored about 1 year ago by NicolasEM2C <[email protected]>

code formating and forgot a test

2094c5049e36e20a71e72a2664a55a82921b2c02 authored about 1 year ago by NicolasEM2C <[email protected]>

finally removed redondant example page

ebdac8632d8df60956bc1da43fa07c4763a98ba2 authored about 1 year ago by NicolasEM2C <[email protected]>

minor reorganization

5363843e2c14590f0e4615ce88ef1c9374b4a85f authored about 1 year ago by NicolasEM2C <[email protected]>

more details in example sections

905bd2b93b8dd4f5c5eaecd7be451b7293137021 authored about 1 year ago by NicolasEM2C <[email protected]>

move examples of 'example' page to the .py of the example gallery

6803c762538030b00968537c18faf2028e1b9bb7 authored about 1 year ago by NicolasEM2C <[email protected]>

organization of examples gallery

c44a0a50e45cb23239a89cf9cef309fb296f7c8b authored about 1 year ago by NicolasEM2C <[email protected]>

removed unecessary details of the index

d67fabce82f57fb8ae4da8c98d5d04da1bf41174 authored about 1 year ago by NicolasEM2C <[email protected]>

Merge pull request #636 from radis/hitemp_load

fixes hitemp loading error

109d9fa866a0270d7f84d1ac1273c8772fd2b83e authored about 1 year ago by Nicolas Minesi <[email protected]>

space completely removed

8490f64510aacb8ef573daa306c12c85e342a709 authored about 1 year ago by Hajime Kawahara <[email protected]>

space removed

0fbeddace7a0a73014e039b6fa9afb145a97abac authored about 1 year ago by Hajime Kawahara <[email protected]>

oops other unrelated changes modified

5981096ae2a701bec6e741492fa73ebbd2e2cec6 authored about 1 year ago by Hajime Kawahara <[email protected]>

fixes hitemp loading error

67904ee139cd8d5801e9a4b40b4a827b69b19c1f authored about 1 year ago by Hajime Kawahara <[email protected]>

more simple version to run first the fast tests

0870850485bad2bc2791a6b564e31000095c57dd authored about 1 year ago by NicolasEM2C <[email protected]>

Merge pull request #632 from radis/auto_import_exomol_states

[Minor] Secondary xaxis & download of .states.bz2 file

0cb1a259d02fe7d9ad956a29c04abb44dd993324 authored about 1 year ago by Nicolas Minesi <[email protected]>

Update radis/lbl/factory.py

Remove a forgotten comment

Co-authored-by: Erwan Pannier <[email protected]>

8666c1b003bbc4300f377a2371551afe8fea3ee0 authored about 1 year ago by Nicolas Minesi <[email protected]>

new attempt to separate rapid and long tests

1a6f4149dda5bde564722cf256f6d9e99f88362c authored about 1 year ago by NicolasEM2C <[email protected]>

check just fast test

4e6b24fe9ee3f1114f85a91fb4dafd825c624ace authored about 1 year ago by NicolasEM2C <[email protected]>

correct pytest command

323db5a75f8568464bb1b1551f02243343e2e2c9 authored about 1 year ago by NicolasEM2C <[email protected]>

potential solution to accelerate feedback of travis

55cd5808041b84e5ea54cacf097ad8a0d3b04cd9 authored about 1 year ago by NicolasEM2C <[email protected]>

linting

04776271a9c14df01741625bfa0811c3071ef84b authored about 1 year ago by NicolasEM2C <[email protected]>

solves issue #590

ca0e07e007733eac9340860d8e9af6a1f9fb72f6 authored about 1 year ago by NicolasEM2C <[email protected]>

avoid automatic download of the exomol .states.bz2 file

4ac93ebd387fe429ce49e47e9e18d3382843140c authored about 1 year ago by NicolasEM2C <[email protected]>

Update factory.py

cefd9a2be2e2a64af8c6d6802a319df1c75c62d8 authored about 1 year ago by dcmvdbekerom <[email protected]>

Merge pull request #611 from erwanp/add/runnable-matlab-example

New Spectrum.fit_model() routine, s.argmax(), and s.from_mat() for Matlab interface

41945ac838ad9e06d29614e128216ed119bf6091 authored about 1 year ago by Erwan Pannier <[email protected]>

add HBr in Exomol molecules

6cf50c4991a284b14015f6d3789c6568136b7b0c authored about 1 year ago by Erwan Pannier <[email protected]>

typo

d7e6f3e33c46f3bb1f6573655d46a044414cb558 authored about 1 year ago by NicolasEM2C <[email protected]>

comment on yerr and correct Tref for Minesi2022 fitting

8f02be3ef8bc38d048661837e14c53f8600b624a authored about 1 year ago by NicolasEM2C <[email protected]>

checked if fitting works to retrieve temperature

69417761a8fc17b5a53cf85adecbf67c7ee39e2e authored about 1 year ago by NicolasEM2C <[email protected]>

added line area as an hidden attribute

4f94383bc9c29c1981fe8aaab5dbfdd7f84bc0b2 authored about 1 year ago by NicolasEM2C <[email protected]>

added SO in Exomol list

094ff65048ecfb6c2981d870a8fc34dfad90a348 authored about 1 year ago by NicolasEM2C <[email protected]>

update `fit_model` to account for inline plotting compatibility

e3b6600fff1fed9259371c53d851303c91983a0c authored about 1 year ago by NicolasEM2C <[email protected]>

(docs) fix links, fix (all!) typos in code blocks declaration

d996133d3af0e1e3c81c7738ecd0e9a69fff66ff authored about 1 year ago by Erwan Pannier <[email protected]>

made compatible for `inline` ploting that is default in Spyder

1b55f1c3f0c277bf08ade5347944de2f5ef68dd2 authored about 1 year ago by NicolasEM2C <[email protected]>

update version for 0.15

0051b0f94cc439ef02d7207300117f67fe33b703 authored about 1 year ago by Erwan Pannier <[email protected]>

add new argmax(), argmin() functions to return the waveposition of the max & min of a Spectrum

add a new example showing post-processing operations on spectra
add a Spectrum.from_mat() functio...

4e29e7dd18f6116af70c4583ee8b248fc6dafff7 authored about 1 year ago by Erwan Pannier <[email protected]>

add tests for argmax, argmin, from_mat, fit_models

9a2654b10725223be444cdaa25eb25046915f655 authored about 1 year ago by Erwan Pannier <[email protected]>

add Spectrum.fit_model function to very easily fit one or multiple Lorentzian, Gaussian, Voigt

add 1 example

ad04787b6e0b7eb9a24fd295d01eb07e2ebeaeec authored about 1 year ago by Erwan Pannier <[email protected]>

add a hack to run valid Matlab code in Python and therefore make the Matlab example runnable in Sphinx

add new example that shows the example in the online docs

a21116281b02dcd560683e910b2c86bb33b3f968 authored about 1 year ago by Erwan Pannier <[email protected]>

(docs) enforce raw docstrings [fixes unicode pbs in doc generation]

2c00798955f845a852440b5793026173ba2d4ad7 authored about 1 year ago by Erwan Pannier <[email protected]>

add a hack to run valid Matlab code in Python and therefore make the Matlab example runnable in Sphinx

add new example that shows the example in the online docs

224b6fde24fa129f9ef44fda1233005174202f81 authored about 1 year ago by Erwan Pannier <[email protected]>

Merge pull request #626 from radis/compat_w_exojax_broadening

resolves the incompatibility w ExoJAX for set_broadening_coef. See ht…

47b4df3e6b359758831c86b9b5380fc527267b65 authored about 1 year ago by Nicolas Minesi <[email protected]>

resolves the incompatibility w ExoJAX for set_broadening_coef. See https://github.com/HajimeKawahara/exojax/issues/425

74a889a4a7ebe845df01a8b9caa140d1029acb21 authored about 1 year ago by Hajime Kawahara <[email protected]>

linting

7ab1768a80ba4104d03708bf573d62ae6585f6d6 authored about 1 year ago by Dirk van den Bekerom <[email protected]>

Merge pull request #604 from dcmvdbekerom/cuda_driver

RADIS GPU functionality without the need for having CUDA Toolkit or Cupy installed.
Also introd...

abe21baebf5c1374742270546ba137659494038a authored about 1 year ago by Dirk van den Bekerom <[email protected]>

Update radis/gpu/gpu.py

Co-authored-by: Nicolas Minesi <[email protected]>

bc00d0462e874b698011c12fd7d7e43b6a327137 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

Update radis/gpu/gpu.py

Co-authored-by: Nicolas Minesi <[email protected]>

c9ba39ce7991132d0c2354caff5d7dd7223ae8d8 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

Add self + air broadening

The T-dependence is only that of air for now.

8cb8c7655c8095822b63686384b23695e0488d7d authored over 1 year ago by Dirk van den Bekerom <[email protected]>

fix gpu/cpu switching issue

434abfc46190ed8b1a70400f112c70449e03b323 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

Update plot_gpu_widgets.py

214087d1ddc7ecd1bf5f8b72d8493f0ded7ec8f4 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

Working on Linux!

slider widgets doesn't show up, but likely unrelated to gpu because plot_gpu_recalc.py does work.

083d6eee0387a9e9f2cc8fae364af62988be0f47 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

linux compatibility

074e251097c004d9c7f8cb13ecf5498f4b04dede authored over 1 year ago by Dirk van den Bekerom <[email protected]>

typos

d5f20553227c156c96331c7e33e1d3b5ca21b6f5 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

all quantities now working, except emissivity

53bf4e2914ced19b01c7acfe5f2902286d1f440b authored over 1 year ago by Dirk van den Bekerom <[email protected]>

convert infs to nans in convert.div_safe()

5bf7f6d9aaccba501eb31cec9cea84fafae9cc1b authored over 1 year ago by Dirk van den Bekerom <[email protected]>

add spectrum.recalc_gpu()

This allows fast recalculation outside of the interactive plotting, e.g. for use in fitting.

0adf04eaf01630c2f1651a19c7c32acee3457c23 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

remove 'pressure_mbar' in favor of 'pressure'

3ac54322131ac594121a6024d6046c2c711066d9 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

add cython import

also set df.gpu_backend to None by default

a92c1ab9026cf38b9e1465be5052c0d9f3f62dd5 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

fix deprecated method ax1.get_shared_x_axes().join(ax1, ax2)

https://stackoverflow.com/questions/17329292/matplotlib-set-shared-axis

33af1bab203d639c48ffdb77e320a2bda0159e19 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

generalize gpu.py (remove explicit cuda mentions)

c21bb6ec5f0be04b366911fcbbe5e35573dc7111 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

optimize cpu-cuda performance

a1beebf40e1f49d855a8918adec22e66be65d56d authored over 1 year ago by Dirk van den Bekerom <[email protected]>

remove cy_init_L_params()

cy_init_L_params(), one of the few remaining cython codes,
is actually a little slower than ini...

5206baf41d5a94c5f7531ad846cf7f52962f0bbc authored over 1 year ago by Dirk van den Bekerom <[email protected]>

apply slit function on CPU only (for now)

The partial GPU support we had is commented out so it can be used again when we fully suppot it.

6c60db6fd69f6ac07f3d07e8061f3ecca317d25b authored over 1 year ago by Dirk van den Bekerom <[email protected]>

update docs

a2b7a5c05489895aa87a10b989ba228c27cebf22 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

linting

9e31f487969dea9f8d592b1fd394e77f38aaa4b8 authored over 1 year ago by Dirk van den Bekerom <[email protected]>

un-ignore build files

d1b8eb9adffe5b4e4ea09a3b4c9c417ae232a32f authored over 1 year ago by Dirk van den Bekerom <[email protected]>

Update MANIFEST.in

9cc377378ef9ac38fcf2c3617f6a61c58165a38c authored over 1 year ago by Dirk van den Bekerom <[email protected]>

Update test_gpu.py

44818a87b41ea494384e46887c66384f37c7f5ea authored over 1 year ago by Dirk van den Bekerom <[email protected]>

use proper backend structure

- changed 'emulate' keyword to 'backend'
- moved cuda stuff to cuda folder
- current backend opt...

9679e74649825c70b1b372fb7b0b57c954458c7b authored over 1 year ago by Dirk van den Bekerom <[email protected]>