Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/ome/ome-ngff-validator

Web page for validating OME-NGFF files
https://github.com/ome/ome-ngff-validator

Merge pull request #31 from yarikoptic/enh-codespell

Add codespell support and make it fix few typos

a3ea7514c1aa99d510d034ccb61282cf758f929e authored 11 months ago by Will Moore <[email protected]>
Merge pull request #30 from will-moore/showSliceControls_fix

fix use of showSliceControls

bda290db9b4477e9145890a680edf87ec7b02b09 authored 11 months ago by Will Moore <[email protected]>
[DATALAD RUNCMD] run codespell throughout fixing additional new typos automagically

=== Do not change lines below ===
{
"chain": [],
"cmd": "codespell -w",
"exit": 0,
"extra_in...

a48cfa1252a6b792828d7526b2d9946621277a8d authored 11 months ago by Yaroslav Halchenko <[email protected]>
Add rudimentary codespell config

2a8159ffd15537bf3d7aa966eda7c0c350aafcee authored 11 months ago by Yaroslav Halchenko <[email protected]>
Add github action to codespell main on push and PRs

261fda2d6ae549b8e9b9cad53e0f8a58f53a9de5 authored 11 months ago by Yaroslav Halchenko <[email protected]>
Merge pull request #18 from will-moore/fix_dtypes_check_versions

Fix versions for dtype checks. Don't check v0.4

7403f462907fc789dff5cf2a028024b9cc4f97e3 authored about 1 year ago by Josh Moore <[email protected]>
Support 'warning' status for some checks

4acfaaa528b1e8be09711e2adb8501a6ad5c5952 authored about 1 year ago by William Moore <[email protected]>
fix use of showSliceControls

ac1991509874746a7085dcc477f90e496e43dfb3 authored over 1 year ago by William Moore <[email protected]>
Merge pull request #29 from will-moore/cube_chunks_fix

Swap chunkX and chunkY for cube lines

fe75b5294a569ee6078fca49fbc91888a4039822 authored over 1 year ago by Will Moore <[email protected]>
Use chunkY for left cube face

3533421268f27fee5f2edb5f4379e2b4c6be0e39 authored over 1 year ago by William Moore <[email protected]>
Swap chunkX and chunkY for cube lines

b0bc7dc696ceddd1857d7843dbcfb8abf8799bbe authored over 1 year ago by William Moore <[email protected]>
Merge pull request #25 from will-moore/cors_error_handling

Try to detect errors due to CORS when fetch fails

5f410d56df0d66c2145ae40639431ff3dd1b3046 authored almost 2 years ago by Josh Moore <[email protected]>
Add more samples to the SplashScreen to aid testing etc

ead2f9c2f6210de18d2f7ad3213b237d30debe90 authored almost 2 years ago by William Moore <[email protected]>
Merge remote-tracking branch 'origin/main' into cors_error_handling

8479e996fa6129af47f5e9d4f7b3f7b2ead76c65 authored almost 2 years ago by William Moore <[email protected]>
Merge pull request #28 from will-moore/viewer_logo_fix2

Viewer logo fix2

f7c5f08c6b2002a475ff029ab0385e0404208c8a authored almost 2 years ago by Josh Moore <[email protected]>
Fix path to OME/METADATA.ome.xml broken in #23

b3b6801387ed1c7bf3c87e25e9ff306467924aef authored almost 2 years ago by William Moore <[email protected]>
Fix logos using alternative approach

c673c3dcd4f30ca696b494744e6403a8ecdd8475 authored almost 2 years ago by William Moore <[email protected]>
Merge pull request #27 from will-moore/fix_openwith_viewer_icons

Dynamically generate path to OpenWith viewer icons

3a0e4b67e9a1994494b5954b99f0e88a8ce36ed6 authored almost 2 years ago by Josh Moore <[email protected]>
Dynamically generate path to OpenWith viewer icons

66af69f95d922b0789d7b0407c6cd63617a84d1e authored almost 2 years ago by William Moore <[email protected]>
Merge pull request #23 from will-moore/multiple_viewers

Multiple viewers

802105b14a41551040c6e8819d3f40ba4115b318 authored almost 2 years ago by Josh Moore <[email protected]>
Fix temp errrors

7c6a60f8c671f3079152510709fecca309451ca4 authored almost 2 years ago by William Moore <[email protected]>
Rename OpenWith to try and fix build

022e5bb7b45a35fc2381df913cc98ef8f4e505fb authored almost 2 years ago by William Moore <[email protected]>
Remove unused css

ca2d5e9e42e661ea225c7e9f1e03146afee193be authored almost 2 years ago by William Moore <[email protected]>
Add Copy button for non-web viewers

a841121214a06d1b6dedb728892fd25b8d0c44cc authored almost 2 years ago by William Moore <[email protected]>
Try to detect errors due to CORS when fetch fails

d2c25b14b0e4db41e6adbefd29971ecea9cf39be authored almost 2 years ago by William Moore <[email protected]>
Add napari and MoBIE

0c5a10b2359546b5a32db20be6308c80d16ea1ad authored almost 2 years ago by William Moore <[email protected]>
Add OpenWith links to 4 web-based viewers

ac70dcf8ad8bb23be033fa1f4b7fa22bc6eca98e authored almost 2 years ago by William Moore <[email protected]>
remove extra / from source

2656dae34859253d3be7aaaf540b9d7dbae7fede authored almost 2 years ago by William Moore <[email protected]>
Merge pull request #22 from will-moore/labels

Labels

2f9a077533e036df22a0100607bd3265db45859a authored about 2 years ago by Josh Moore <[email protected]>
Handle null in JsonBrowser

cc22ac9dc142dd2da55d8fc15164b018c32c698e authored about 2 years ago by William Moore <[email protected]>
Support validation with multiple schemas

1dddb67209cba25494ca8d2e628764436c558e5a authored about 2 years ago by William Moore <[email protected]>
Add link from image.zarr to child labels

b9fe37ccf2b9dd23c1825a97f3e4c57775b6696d authored about 2 years ago by William Moore <[email protected]>
Merge pull request #21 from will-moore/load_zarr_chunks

Load zarr chunks

dd357bdf3279588c8d56cb764d75170e801c8ed0 authored about 2 years ago by Josh Moore <[email protected]>
Use store.get() and slice() for chunks

0fc5bada69370b839a27d69de103b0068dd6744e authored about 2 years ago by William Moore <[email protected]>
Handle 3D chunks

93a2ed927e30ecdedaba5181b52aef6358a6aee6 authored about 2 years ago by William Moore <[email protected]>
use zarr.js to load chunks

5007b543b1a1f55e87c0d7f2f82ffafafdc8e3af authored about 2 years ago by William Moore <[email protected]>
Add ChunkLoader.svelte

4604084a52bd54bac407cf398a7286a11af67165 authored about 2 years ago by William Moore <[email protected]>
Fix versions for dtype checks. Don't check v0.4

5109ae232c426c3ed5fadd8b46310136af99cde9 authored about 2 years ago by William Moore <[email protected]>
Merge pull request #16 from will-moore/dataset_array_checks

Check datasets shape and dtype

e694ab0075d91d5a8ec836c3d923d4d7cedb4a38 authored about 2 years ago by Josh Moore <[email protected]>
Improve error message for invalid version/no schema

58094dd2c62388bd5fb8f2e375dbf8ecdcb8f632 authored about 2 years ago by William Moore <[email protected]>
Handle invalid version - schema 404 shows X fail

1c40a6a71900b3dff5ae728471ec886484e092c0 authored about 2 years ago by William Moore <[email protected]>
Check dimension_sparator is / for v0.2-v0.4

4dff5f479481b164bc742c732607080a3bbc0d12 authored about 2 years ago by William Moore <[email protected]>
Only check dtpes if version requires it

ce5dc49f85366d8e3317c26cd9eb56f5e6a9840a authored about 2 years ago by William Moore <[email protected]>
Check datasets shape and dtype

a22aa14b9df242d2bd7419bc454a61d3b38c36df authored about 2 years ago by William Moore <[email protected]>
Merge pull request #15 from will-moore/fix_JSON_array

Fix rendering of list with false-like first item

05307788c8ef43899d911ec4f5cc65e2444d57eb authored about 2 years ago by Will Moore <[email protected]>
add indent to array items: string, number, null

d4a61e148d8009665f7555c3abcb84b40478cac0 authored about 2 years ago by William Moore <[email protected]>
Merge pull request #14 from will-moore/multi-well-validation

Multi well validation

80e798e3cec752c9962959abb5c8de01bb481546 authored about 2 years ago by Will Moore <[email protected]>
Use <select> for changing well index

0f9111feb55b57a66b5c9afb996f44bb7ac299a0 authored about 2 years ago by William Moore <[email protected]>
Plate shows which Well being validated, links to 'all'

e36040b4d04ae0df695290ab579632429b120297 authored about 2 years ago by William Moore <[email protected]>
Wells support ?well=1 or ?well=all for validating all images

ccd092a45e9b1e7b1a3eacef102335ff1aeb5618 authored about 2 years ago by William Moore <[email protected]>
Add workflow_dispatch for re-running deploy

8ca5ea118b802a66d2e0e83894295ead76b86723 authored over 2 years ago by Josh Moore <[email protected]>
Merge pull request #13 from will-moore/bioformats_layout

Since this has been announced now (see image.sc link above) this needs to be "released". Merging...

4041dee918242f6c9432adc4e63bf81ac94e2332 authored over 2 years ago by Will Moore <[email protected]>
Update version and changelog 0.3.0

9a4d3a99066e12fcaf7754ed867cf90689d78966 authored over 2 years ago by William Moore <[email protected]>
Fix 3D cube mouse-over

broken by earlier css change that caused parent.offsetLeft to give different value

7a9fa8af77cde9367099fea382a5d5f894a3c162 authored over 2 years ago by William Moore <[email protected]>
Fix Title for bioformats2raw.layout

af243e983058f9ad00c37828bc362df2b52f241d authored over 2 years ago by William Moore <[email protected]>
css tweak to avoid text overlap with vizarr link

315b30113da6c8e688f39f2e7b6bdd033f909da7 authored over 2 years ago by William Moore <[email protected]>
Fix 'Open Plate in vizarr' tooltip

358add4648cf620bcf35e5195f3dc78f2c338239 authored over 2 years ago by William Moore <[email protected]>
Don't use Bioformats2rawLayout for plates

31917947d4481f4fc2aae8053cebd293e372c086 authored over 2 years ago by William Moore <[email protected]>
Add vizarr link to Plate, Well, Image pages

1e6c887c83756037fee252d9f4ba08c82d176b54 authored over 2 years ago by William Moore <[email protected]>
Add 'view in vizarr' link to bioformats layout page

77a6b698faa580b2ca500042a4a7a7d4b5679300 authored over 2 years ago by William Moore <[email protected]>
Fix extra / in OME/METADATA.ome.xml

d77229c20962bf1c9f05d48df0805f91587bfe4b authored over 2 years ago by William Moore <[email protected]>
Tidy image list - validate each image/.zattrs

5215bd17dad3811d30f6897e1daa1ad8d0a529e6 authored over 2 years ago by William Moore <[email protected]>
Basic load of OME/METADATA.ome.xml and links to images

d322278b41417202ea4a0ea19e7a7d5ddbea6a63 authored over 2 years ago by William Moore <[email protected]>
Reorganise components into hierarchy

58466759d59919c6336d64ee7d3ad8d848c5986d authored over 2 years ago by William Moore <[email protected]>
Merge pull request #12 from will-moore/fix_links_with_pathname

Fix links with pathname

b3ddc128812907c194ea6485c8d9b051d2568618 authored over 2 years ago by Josh Moore <[email protected]>
Changelog and package.json version for 0.2.1

e809d017df6f8cda3d2cd0f81fb39fd152465d4b authored over 2 years ago by William Moore <[email protected]>
Fix Plate->Well and Well->Image links to include pathname

When deployed on https://ome.github.io/ome-ngff-validator/ the pathname /ome-ngff-validator/ nee...

6acbe8c57b6b06deb65fd14db6d33bb5529aa21e authored over 2 years ago by William Moore <[email protected]>
Merge pull request #11 from will-moore/browse_spw

Browse spw

1ed58b59fbd1edd7cefb7f1013630d67331ac422 authored over 2 years ago by Josh Moore <[email protected]>
Added v 0.2.0 entry to changelog

8d23093608ddd4238ff827d2d1daa00d84783fae authored over 2 years ago by William Moore <[email protected]>
bump version to 0.1.1

cca7d02367c204d3aa6d0c4773a8aa067d3234d0 authored over 2 years ago by William Moore <[email protected]>
Add CHANGELOG.md

042362d614570d0e79bcd507d9cc27c530eda2a1 authored over 2 years ago by William Moore <[email protected]>
browse Plate -> Well -> Image

f1c41aa68910d02cbd01df905b1770c176f7bfaf authored over 2 years ago by William Moore <[email protected]>
Merge pull request #9 from will-moore/more_features

minor features

0985fcc2d360c9cf82b51dbefba1320a885021a0 authored over 2 years ago by Josh Moore <[email protected]>
Add simple 'About' dialog

d8a92239878ff3a4deea0cdd79f6b17aae987d00 authored over 2 years ago by William Moore <[email protected]>
Use (i) icon for link to spec

24b4462acab6f78e1daca779bfe66d81e1486397 authored over 2 years ago by William Moore <[email protected]>
Add Json links to ngff spec

21ee79ed4cf4529c52fdcf760a6f5ed3c3281e4b authored over 2 years ago by William Moore <[email protected]>
3D cube rotation tweak

adaa7193008d88bd8e70b46b0ef8ad1ac34d69d0 authored over 2 years ago by William Moore <[email protected]>
Mouseover 3D cube to rotate it

8bb6cf45852f8e66576bdf68f95a32cd8581de04 authored over 2 years ago by William Moore <[email protected]>
Fix 3D cube Z chunks

2ce0fce90c4219f29943c60fba111073b9d60277 authored over 2 years ago by William Moore <[email protected]>
Merge pull request #8 from will-moore/no_source

Handle no ?source=... show message

67feb018725ef46e3378f1bc46e500aa721f047f authored over 2 years ago by Josh Moore <[email protected]>
Try adding netlify.toml file to fix deploy 404

As suggested at https://answers.netlify.com/t/site-cannot-be-accessed-broken-link-or-url-that-do...

768caf819a89536f2151dd4f7ffacdc67e2086b0 authored over 2 years ago by William Moore <[email protected]>
Handle no ?source=... show message

b26517ca55121dd418d3c1e5e25cb349d6d28cfd authored over 2 years ago by William Moore <[email protected]>
Merge pull request #7 from will-moore/fix_ghpages_deploy

Fix deploy on gh pages

38f5e31201ecc8fe822f1dd183c7054f217d0587 authored over 2 years ago by Josh Moore <[email protected]>
Fix deploy on gh pages

Accidentally broke this in https://github.com/ome/ome-ngff-validator/pull/5/

ed7d65b9b652569115e8fef852336fc105acbd53 authored over 2 years ago by William Moore <[email protected]>
Merge pull request #5 from will-moore/svelte_framework

New svelte-based UI

d645b5b2a36046e4a7cef7aea81e3ea72f50d626 authored over 2 years ago by Josh Moore <[email protected]>
JSON browser has // items count if not expanded

8160537a081a4a0a942fbbc8183c28f6964dac63 authored over 2 years ago by William Moore <[email protected]>
Fix trailing commas in JSON browser

94a9ea6ebdc1edf091d2151f4215fe7b90079948 authored over 2 years ago by William Moore <[email protected]>
Prettier formatting

1412edfbed503469c4ccad0152f598ceffe828f9 authored over 2 years ago by William Moore <[email protected]>
Responsive layout - 2 columns on wider screens

8afa3a494f33803795f65e89c094f8277f08ba40 authored over 2 years ago by William Moore <[email protected]>
Add browsable JSON

e611b23646bddc8e180d0857fc83f96ad88d7146 authored over 2 years ago by William Moore <[email protected]>
Put rootAttrs in same panel as validation

ddb4d0dfd4a58403f81fc5ad9451d265471ec032 authored over 2 years ago by William Moore <[email protected]>
Add Tasks and Chunks counts to zarray table

b74583413f60b4506d2a92bf1e412fb8e49b7fb3 authored over 2 years ago by William Moore <[email protected]>
Fix bytes display for single-byte dtypes

affe738042d0fed70f72e93b401c84abf4bdbabf authored over 2 years ago by William Moore <[email protected]>
Fix sizeY label positions

740788386879574478a0b283fd41b8d907b9f71c authored over 2 years ago by William Moore <[email protected]>
Use OME favicon

b1e8789a34dca7a6e40e62f499d591d8797f108f authored over 2 years ago by William Moore <[email protected]>
Fix '2' in package name

a3c5ee2dc1612daa3e4efd5073b1aa39d05f629c authored over 2 years ago by William Moore <[email protected]>
show chunk sizes correctly

31f9c5a38777e55fb7cf3c7b3fb0a26165804138 authored over 2 years ago by William Moore <[email protected]>
move Cube3D to new component

29da341fe9000b57c038a067d62f41a06f40c677 authored over 2 years ago by William Moore <[email protected]>
Fix tables on mobile devices

d48e786209c52eda1372cc3621f9dc50418be080 authored over 2 years ago by William Moore <[email protected]>
Add to README

7b2c7b183a45ed50c8582e16b9845c001207633b authored over 2 years ago by William Moore <[email protected]>