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github.com/orcasound/orcadata

Development of bioacoustic tools for analyzing Orcasound data -- either post-processing of archived raw FLAC files or real-time analysis of the lossy stream and/or FLAC files.
https://github.com/orcasound/orcadata

Add Quilt section and visual-sandbox bucket

d8d746e0d5bb0227fc9d3a27250cfce1f7d26d46 authored over 1 year ago by Scott Veirs <[email protected]>
fix typo

eccd2bb7925e0bb5fbf7254eb9ae829bfb2748dc authored over 1 year ago by val veirs <[email protected]>
fix typo

f1790448b778db2f066171106d573a9ae9899f83 authored over 1 year ago by val veirs <[email protected]>
fix typo

f58e0cc971bcbf8739a01dab27a6e029ea4621cd authored over 1 year ago by val veirs <[email protected]>
Upload files

b4ad4f032a3ad88645185cd46e6f4aeac3b04abf authored over 1 year ago by val veirs <[email protected]>
create wav_to_PSD

200cffbf15b5935f80a413e699b9b27116d6d621 authored over 1 year ago by val veirs <[email protected]>
val test

80e455ba58e38215f4d9a89ab5d03cc5a4eb9551 authored over 2 years ago by val <[email protected]>
val test

7d8095cc3cddf3a6ecab595b4817b0414f370939 authored over 2 years ago by val <[email protected]>
val test

81bce16c85c1f595b16cf7a8f749948bad74f06c authored over 2 years ago by val <[email protected]>
val test

3774152195f20d656d83bd65db431672a8221318 authored over 2 years ago by val <[email protected]>
Add documentation about emerging ways to automate downloads of live-streamed audio data.

89baf35bebd0a931f84be5c16508bf8cc4f1c5b0 authored over 2 years ago by Scott Veirs <[email protected]>
Update shell script for grabbing S3 data containing a bout.

1157067b2180f038c2a504acf14f3eb7d4b31f8b authored over 2 years ago by Scott Veirs <[email protected]>
Merge pull request #31 from orcasound/valentina-s-patch-1

fixing unresolved merge conflict in the beginning of access.md

65d8801f1b2c961704ed7477e71f90cd8b5e57e7 authored almost 3 years ago by Valentina Staneva <[email protected]>
fixing unresolved merge conflict in title

d2cf874c60e1ff3f58c94ee9e54f7883e84df9d7 authored almost 3 years ago by Valentina Staneva <[email protected]>
Initial annotation processor for Emily Vierling

d79bc98b91321242a26a182d262aa5d78f3462ee authored almost 3 years ago by val veirs <[email protected]>
Merge pull request #26 from Durgesh93/patch-ProcessLocalFilesForCalls

changes done ProcessLocalFilesForCalls regarding figure plotting and in ScanLocalAudioFilesForCa...

846d7e8f2aa78c1c3d05ca68f6d7d342d1870bb2 authored almost 3 years ago by val veirs <[email protected]>
Merge pull request #22 from Debjoy10/patch-1

Rectified errors in WAV_FLAC_Annotator_0_6.py

e8d6e11d98928cb060467df3e837946e52fa22cc authored almost 3 years ago by val veirs <[email protected]>
Merge pull request #25 from Durgesh93/master

Changes regarding in WAV_FLACprocessor_Val/ProcessAWSFilesForCalls

4f75a2da7eb7b6afdbdfd5084ba2b44f704b05b5 authored almost 3 years ago by val veirs <[email protected]>
Merge branch 'TechTarun-techtarun' into master

6e0d433ab74746fa9ac0545845bbcf6ffff12178 authored almost 3 years ago by Scott Veirs <[email protected]>
Minor edits to TechTarun PR; add PAMGuard link

881a5dac3ae5db12f3ac7361f005024e27e634ec authored almost 3 years ago by Scott Veirs <[email protected]>
Delete relic file from Mac OSX

c88cf785dd2f9461d9aa894c39949d42dc23feaf authored almost 3 years ago by Scott Veirs <[email protected]>
Merge pull request #23 from Debjoy10/patch-2-spectrogram

Fixed plotPath in spectrogram.ipynb

af99da27fbd3b56aa233e9c5375a4244ae7da20e authored almost 3 years ago by Scott Veirs <[email protected]>
Merge pull request #21 from nikhilrana015/patch-3

Function Name error

79bb68b65b50ecca5aba797e04965e8208ee4d05 authored almost 3 years ago by Scott Veirs <[email protected]>
Merge pull request #20 from kunakl07/kunakl07-patch-2

Added searchFileForCalls

5b7f3e5dd48a874c4b91e6d3f5c39513bbc87378 authored almost 3 years ago by Scott Veirs <[email protected]>
Merge pull request #17 from kunakl07/patch-4

Some typos fixed of access.md

96204e891075762297fb73a7e4b2d893c7a05d53 authored almost 3 years ago by Scott Veirs <[email protected]>
Merge branch 'master' into patch-4

d81da18920b220eae4944d2372d5a64ecc98eeaa authored almost 3 years ago by Scott Veirs <[email protected]>
Minor alterations to the first two edits.

74b01dbbaa209084d9f0880ea7c7c7b19424a517 authored almost 3 years ago by Scott Veirs <[email protected]>
Merge pull request #16 from kunakl07/patch-3

Some typos fixes

cb9944e1aedd9cdca88436c5466c671d707f9c67 authored almost 3 years ago by Scott Veirs <[email protected]>
Merge pull request #15 from kunakl07/patch-2

Some typos fixed

d48d55ed73df10696197154d365a33c15bb66213 authored almost 3 years ago by Scott Veirs <[email protected]>
Minor alterations to the last two edits.

4a75234d53a8f70819abecf3ab12a161213e2225 authored almost 3 years ago by Scott Veirs <[email protected]>
Merge pull request #4 from rishiraj/patch-1

Fix import 'signature' error

1c183a3aceef33f690f5672aa3ab1af12c0506e7 authored almost 3 years ago by Scott Veirs <[email protected]>
add readme

71131a5c5386d27b7be58de6e08b831fcff14465 authored over 3 years ago by val veirs <[email protected]>
First upload of preprocessorFor3D

d866c3e0302b352ff730ae168cb85a86a9fa8258 authored over 3 years ago by val veirs <[email protected]>
Embed screengrab of S3 URL from network console, rather than href.

58615820c0bb540c7d4b28dc8fcf796c3db37c40 authored about 4 years ago by Scott Veirs <[email protected]>
Add link to screengrab of network console to illustrate where to find Orcasound S3 data URL

b4eed0e3d5ada81266a68e206eb79376a0430e0c authored about 4 years ago by Scott Veirs <[email protected]>
Add access example with syntax

b0ee32e4abb13f859df0ee25942bdd3985f369d9 authored over 4 years ago by Scott Veirs <[email protected]>
Increased number of background files

47b246af905157d16a0c503eb5eb13fccc19bae3 authored over 4 years ago by val veirs <[email protected]>
Adapted to background clcs

6127bc1e154e511de5f5890a2954bcd6f7f0a10f authored over 4 years ago by val veirs <[email protected]>
Fixed time axis error

41bfbe161fedee695b12122f19b1ebd518dd4a52 authored over 4 years ago by val veirs <[email protected]>
Added comment re background spectrograms

cb50bb10aab13080b87e4958c9f97cc7b94950d0 authored over 4 years ago by val veirs <[email protected]>
Added background spectrograms

08886f84501a72182065d9c773f2050146a2cd2b authored over 4 years ago by val veirs <[email protected]>
Add files via upload

6f6986c860e0533f8b99f34d1616b55e91920c42 authored over 4 years ago by val veirs <[email protected]>
Update readme.md

63902630efebd094f9f941ed425b29d0fbf638a9 authored over 4 years ago by val veirs <[email protected]>
Add files via upload

b8753fc6b98b0b572468d161809d1d18c65ee77a authored over 4 years ago by val veirs <[email protected]>
Add files via upload

f150dfc2bdbc70ae06bdc43464a6f69cbc2f3646 authored over 4 years ago by val veirs <[email protected]>
Add files via upload

332aedce4cd24e4408b5a49f86ee8f3239dd1d58 authored over 4 years ago by val veirs <[email protected]>
Add files via upload

e3b9958ae2754fc6c963911ccb087a37ed687835 authored over 4 years ago by val veirs <[email protected]>
Add files via upload

7c05c8802078652ac9af30bbc547de2aa8d49be2 authored over 4 years ago by val veirs <[email protected]>
changes done ProcessLocalFilesForCalls regarding figure plotting and in ScanLocalAudioFilesForCalls regarding to path separator hardcoding

80a361d946c6ab7411e878c3e648fda027aa8760 authored almost 5 years ago by stopUsingGlobalGitConfigPls <[email protected]>
Fixed s3bucket name hardcoding issue and code for checking the existance of the output directory

53a6829628963f4190a52fdbd9221bb918e0d34a authored almost 5 years ago by stopUsingGlobalGitConfigPls <[email protected]>
Merge pull request #5 from rishiraj-acharya/patch-2

Update README.md

a889123858aa07ed5f16a6ee79bbbab97aecc63a authored almost 5 years ago by Scott Veirs <[email protected]>
Script updated

36cfbc87892ba8fc6ee327dee63b4dd97a596ff0 authored almost 5 years ago by Debjoy <[email protected]>
Fixed non-existent file path in Spectrogram/Scripts/spectrogram.ipynb and all coloured spectrogram plots created in Plots

70b88a9e38d80715eec8f68baa687c57eb186266 authored almost 5 years ago by Debjoy <[email protected]>
Rectified closing TypeError

7fed1dde9295ca2bcd3119c0e1bdace17df08666 authored almost 5 years ago by Debjoy <[email protected]>
Added support for single channeled audio files, removed IndexError: too many indices for array

3a11bf77f7337b2d51865222b4abcd0916165210 authored almost 5 years ago by Debjoy <[email protected]>
Added missing import soundfile

a398e6f765dd01d6aa8cc37576ab60e856a66687 authored almost 5 years ago by Debjoy <[email protected]>
Update scanWAVsForCalls.py

95ab8c760741e88cf7003ca3ffff587f3c1c9511 authored almost 5 years ago by kunal mehta <[email protected]>
Function Name error

Wrong--> searchForCalls
Correct--> searchFileForCalls

3751c74a143aec5a9747df44be5544886a9a3b8d authored almost 5 years ago by Nikhil Rana <[email protected]>
Update scanWAVsForCalls.py

cd7d1059ff95bb4f3d8bdf716adc0abdeffedb98 authored almost 5 years ago by kunal mehta <[email protected]>
Added searchFileForCalls

I have added searchFileForCalls and now I think scanWAVsForCalls.py should work fine

62e7e4dd695ead2b84478501869cf354f6c35012 authored almost 5 years ago by kunal mehta <[email protected]>
Merge pull request #2 from orcasound/master

sync

00b59f39397be098f7963fa929f213c87e428605 authored almost 5 years ago by kunal mehta <[email protected]>
Some typos fixed of access.md

I have fixed some typos of access.md file

69fb88400c76eab6e0625bf8fc5542cfba617f5a authored almost 5 years ago by kunal mehta <[email protected]>
Some typos

I have corrected some typos

fa53085791ab7ccdc89b361424f0140b42345cd4 authored almost 5 years ago by kunal mehta <[email protected]>
Some typos fixed

I have fixed some typos in Readme.md of AnnotateSpectrograms

cda4a341bc2aedf8074192746ec70dd72904b821 authored almost 5 years ago by kunal mehta <[email protected]>
Merge pull request #14 from nikhilrana015/patch-2

Adding Library

e6d09cad20e35cca5d83e219e5027da3c04d27bf authored almost 5 years ago by Valentina Staneva <[email protected]>
Merge pull request #10 from kunakl07/kunakl07-patch-1

Typing error fix

f971fb5504c46028a1ac15c93c0f40183b4b4cf2 authored almost 5 years ago by Valentina Staneva <[email protected]>
Merge pull request #7 from orcasound/valentina-s-patch-1

Fixing orcadata wiki link

1cc7ce025065acc3e32f49e69edec2ae882b0258 authored almost 5 years ago by Valentina Staneva <[email protected]>
Merge pull request #3 from nikhilrana015/patch-1

spelling error

2f31455c1737374e5ee65b376ec5210384fbbb1e authored almost 5 years ago by Valentina Staneva <[email protected]>
import matplotlib library.

968c327fcda4b0f0bb9531c44de1c5a5f256155e authored almost 5 years ago by Nikhil Rana <[email protected]>
Typing error fix

Analysis spelling was mistyped

8dc06382076630712a048e7509710c9a5560b6ef authored almost 5 years ago by kunal mehta <[email protected]>
fix orca data wiki

822c68a2f4c06ee650bfa10d561d4cf260987612 authored almost 5 years ago by Valentina Staneva <[email protected]>
Update README.md

f9fdbc7f740610d49ef374bde2ce8620a2b6aced authored almost 5 years ago by Valentina Staneva <[email protected]>
Update README.md

Deleted the troubleshooting part since the error has been solved, the PR for which has already b...

aba8438374802b812f47f989abad2fd8b4c1269a authored almost 5 years ago by Rishiraj Acharya <[email protected]>
Fix import 'signature' error

Fixed the error cannot import name 'signature' from 'sklearn.utils.fixes' permanently without ha...

4862095f4ee61666d33ea74bcab2973ace76fc84 authored almost 5 years ago by Rishiraj Acharya <[email protected]>
spelling error

wrong:- verion
correcr:- version

f45c9fc0fbb6474ecabef30ed1db488198992a7f authored almost 5 years ago by Nikhil Rana <[email protected]>
Fix typo.

75da32f3bf8ed2cc83910a605f1f718a3cf8393c authored about 5 years ago by Orcasound app <[email protected]>
Fix H2 format syntax & add update experiment sxn.

c503b6de0b0ead0ed70b9134c8ea60bc0a393a5e authored about 5 years ago by Orcasound app <[email protected]>
Add link to access.md file and improve formatting.

a6f91fb90b8f2b5b3a731a13460f73b2e541f8a1 authored about 5 years ago by Orcasound app <[email protected]>
Merge branch 'master' of https://github.com/orcasound/orcadata

c3d62eded5db749fa4b20c3a2b7003e3fd72ee92 authored about 5 years ago by Jennifer <[email protected]>
added naive Bayes

084d20ae582aaf5e6ab761fa4d48c4846d67971f authored about 5 years ago by Jennifer <[email protected]>
Changed the loss function

579ec46b706441069eb68790529defd840c82992 authored about 5 years ago by Jennifer <[email protected]>
whois data dataloader and model

55b1f348d2acab8af50ef8be4ecc3454a90a3558 authored about 5 years ago by John Thickstun <[email protected]>
strong performing model

93f252ae83085d837154cb65ceedce67cf96a396 authored about 5 years ago by John Thickstun <[email protected]>
subsample for evaluation on train

784e77050d835d7ff82781290233d49390fb977d authored about 5 years ago by John Thickstun <[email protected]>
add support for pytorch default init and kill iterate averaging for now

fd39f0ea5acbe15b301e7e11a6b1b354288b4f83 authored about 5 years ago by John Thickstun <[email protected]>
translation randomization augmentation option

e2271b51e33f2d1018c206299d7c31b066af7dab authored about 5 years ago by John Thickstun <[email protected]>
Merge branch 'master' of https://github.com/orcasound/orcadata

3c94732baaac9b8f1a5605312597eb88da38f05d authored about 5 years ago by John Thickstun <[email protected]>
convolutional classifier

f0334d4be36e92de4d7224e6c33e5b04423deaed authored about 5 years ago by John Thickstun <[email protected]>
Merge branch 'master' of https://github.com/orcasound/orcadata

223276d04d59783f5a931decce00de1c25476981 authored about 5 years ago by Jennifer Rogers <[email protected]>
Updating readme file with information for running linear model

edd9ce00a251af08c876489af2da0381f0ac385d authored about 5 years ago by Jennifer Rogers <[email protected]>
Merge branch 'master' of https://github.com/orcasound/orcadata

a85f8a1eeea05e78d4ae9ac39b1124541c425145 authored about 5 years ago by John Thickstun <[email protected]>
do the averaging when we evaluate

c7f75cbcdfb2f9413e917ccb5b33bcdfb5b58416 authored about 5 years ago by John Thickstun <[email protected]>
Add AWS CLI syntax section and link.

29cff01fe094fefb65519bf3cee7dd200ba598e2 authored about 5 years ago by Scott Veirs <[email protected]>
Reorganize structure, moving ML resources to end

c1f8475c1c1f9f816094f9c6d32b3ab50c56a06b authored about 5 years ago by Scott Veirs <[email protected]>
Merge branch 'master' of https://github.com/orcasound/orcadata

f396a5ac967fab1f34f2a5b6976246e632205249 authored about 5 years ago by John Thickstun <[email protected]>
don't restore checkpoint by default!

1361809601238c3b74fadb69413af645952e487e authored about 5 years ago by John Thickstun <[email protected]>
Update URL of test data from July 5, 2019

7ba9b55dd462689f8820c415a8bd855578cc5872 authored about 5 years ago by Scott Veirs <[email protected]>
whale classifier

5cb3911ca982e726e1cad685e4c6d2f2dbd38402 authored about 5 years ago by John Thickstun <[email protected]>
Add link to new orcadata wiki and access.md file.

c4389d8dabe51a96d6db1e559c0e1c62a55f7c4e authored over 5 years ago by Scott Veirs <[email protected]>
Merge branch 'master' of https://github.com/orcasound/orcadata

d69f8a3caa04b40bba481dcedbaca511627e4995 authored over 5 years ago by Jennifer Rogers <[email protected]>