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github.com/BioJulia/NaturalSelection.jl
A package containing methods for looking at the effects of natural selection
https://github.com/BioJulia/NaturalSelection.jl
Contributing files rollout (#5)
* Rollout file CONTRIBUTING.md
* Rollout file CODE_OF_CONDUCT.md
* Rollout file .github/PU...
a60c3e27023c2b7e65e12ce24f6f66948e553930 authored over 6 years ago by Ben J. Ward <[email protected]>
Performance upgrade for NG86, introduce codon lookup tables (#4)
Perf upgrade for NG86, introduce codon lookup tables
180dc3b2b925d96c9b41ded7246618baa479da6f authored almost 7 years ago by Ben J. Ward <[email protected]>
Removed more debug print lines
6dfedafbc505e33b82532c9ff6a270bb744458da authored about 7 years ago by Ben J. Ward <[email protected]>
6dfedafbc505e33b82532c9ff6a270bb744458da authored about 7 years ago by Ben J. Ward <[email protected]>
Removed printlns
12ace8b64b1fb5221d7c6b625df96fc1ea22f7b4 authored about 7 years ago by Ben J. Ward <[email protected]>
12ace8b64b1fb5221d7c6b625df96fc1ea22f7b4 authored about 7 years ago by Ben J. Ward <[email protected]>
MacDonald Kreitman test (#3)
* add mkt file
* Added CodonSet type
* CodonSet edits
* Move mkt.jl
* DS_DN_Enumerat...
d44d5d2f0ad66000f1eebf0f42ba8e5832ca1ec8 authored about 7 years ago by Ben J. Ward <[email protected]>
Edited news file.
8eb9c4573b8e322f55e558de786dd4fb6665caa2 authored about 7 years ago by Ben J. Ward <[email protected]>
8eb9c4573b8e322f55e558de786dd4fb6665caa2 authored about 7 years ago by Ben J. Ward <[email protected]>
method ambiguity fix (#2)
358e97bfe51015acda9c5ec40d39b8a742be95a0 authored about 7 years ago by Ben J. Ward <[email protected]>
358e97bfe51015acda9c5ec40d39b8a742be95a0 authored about 7 years ago by Ben J. Ward <[email protected]>
Correct Require
2b833179891869138ca2abfb4be50c9e3d102fcf authored about 7 years ago by Ben J. Ward <[email protected]>
2b833179891869138ca2abfb4be50c9e3d102fcf authored about 7 years ago by Ben J. Ward <[email protected]>
Add Tajima's D documentation
b0ad38b09385c9fd42fb74424a69944e3f69f95f authored about 7 years ago by Ben J. Ward <[email protected]>
b0ad38b09385c9fd42fb74424a69944e3f69f95f authored about 7 years ago by Ben J. Ward <[email protected]>
avg_mut use in tajimad
630969d12d1d676d9c96e057a170965171828874 authored about 7 years ago by Ben J. Ward <[email protected]>
630969d12d1d676d9c96e057a170965171828874 authored about 7 years ago by Ben J. Ward <[email protected]>
Added pairwise_dNdS_NG86
53b99053f87b18e42aeccf698acd055d496665f5 authored about 7 years ago by Ben J. Ward <[email protected]>
53b99053f87b18e42aeccf698acd055d496665f5 authored about 7 years ago by Ben J. Ward <[email protected]>
Add Tajima's D draft
6f21500726b3310819972c3debde886994b30418 authored about 7 years ago by Ben J. Ward <[email protected]>
6f21500726b3310819972c3debde886994b30418 authored about 7 years ago by Ben J. Ward <[email protected]>
Drop mkdocs
d1dea4a00f1e8a4dfa9f9c7225b475098c30986e authored over 7 years ago by Ben J. Ward <[email protected]>
d1dea4a00f1e8a4dfa9f9c7225b475098c30986e authored over 7 years ago by Ben J. Ward <[email protected]>
dNdS - NG86 (#1)
* Added extra repo files
* Added source files
* Added unit test
* Add travis
* Added...
791ffc152f767b8be94401d10332606fa9fa01e8 authored over 7 years ago by Ben J. Ward <[email protected]>
Second Commit
cb04a2d68be451f02b6e49e93db1279ee51fd9a7 authored over 7 years ago by Ben J. Ward <[email protected]>
cb04a2d68be451f02b6e49e93db1279ee51fd9a7 authored over 7 years ago by Ben J. Ward <[email protected]>
Initial commit
fb77b64c6247ca6a24db12588991722dd7ea56ca authored over 7 years ago by Ben J. Ward <[email protected]>
fb77b64c6247ca6a24db12588991722dd7ea56ca authored over 7 years ago by Ben J. Ward <[email protected]>