Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/OpenMS/OpenMS-1

The codebase of the OpenMS project
https://github.com/OpenMS/OpenMS-1

cleanup

7938983e4ddf31aca653fa188b95924580eed348 authored about 4 years ago by Julianus Pfeuffer <[email protected]>
Extend OpenMSInfo (include build type, openmp info and missing infos on linux and macos)

9ffdddb569a5d726bdf466156ba183d19d8c5e03 authored about 4 years ago by Julianus Pfeuffer <[email protected]>
[FIX] add SwathWizard to StartMenu (#4936)

a9551ba48b7b332f85648f97b2f128201c3eeb7f authored about 4 years ago by Chris Bielow <[email protected]>
fix

3e516069aad5d38e9e2ed18e9bb804a0eef7b38a authored about 4 years ago by Chris Bielow <[email protected]>
[FIX] auto-scale column width in SpectraView

0ca5dd68466b9d3b65954a3aa4e642e3d7ad468e authored about 4 years ago by Chris Bielow <[email protected]>
linear instead of quadratic precursor<> mapping

038380ec861cc3be4022bdde3eceaf54173abad7 authored about 4 years ago by Chris Bielow <[email protected]>
Merge branch 'toppview_refactor' of https://github.com/cbielow/OpenMS into toppview_refactor

# Conflicts:
# src/openms/include/OpenMS/FORMAT/FileTypes.h

6d5998bca7610be584deadf3187aa1237eb22513 authored about 4 years ago by Chris Bielow <[email protected]>
support loading SqMass files in TOPPView

a27cbd17c175071f0a95587546daf1f3578c90f0 authored about 4 years ago by Chris Bielow <[email protected]>
[DOC] updating IsotopeLabelingMDVs class documentation

8d108aa62fa8b4e439252353fd7432f2abf2205d authored about 4 years ago by Ahmed Khalil <[email protected]>
[FIX] CMake warning about sqlite package name (#4933)

* [FIX] CMake warning about sqlite package name

* Rename FindSQLITE.cmake to FindSQLite.cmake

73e0caa8700734273cef7674e606464a2b734af2 authored about 4 years ago by jpfeuffer <[email protected]>
* some convenience functions for FileTypes

* avoid std::map include

090f8b158993851103857a62d2a069083b579af9 authored about 4 years ago by Chris Bielow <[email protected]>
Copy some fixes from #4922

#4922

c64b9e4de98a136c7b3f73a66823d97011d264aa authored about 4 years ago by jpfeuffer <[email protected]>
some convenience functions for FileTypes

5adc6eeaa2a16dd177181da93c009000882ac64a authored about 4 years ago by Chris Bielow <[email protected]>
Ensamble spectrum processing added

1fa0821e8d7acefbb04dd224cfccf6928c4b67f2 authored about 4 years ago by kyowonjeong <[email protected]>
Merge remote-tracking branch 'origin/feature/FLASHDeconv' into feature/FLASHDeconv

0c7488f20118678901e0031f76661a7155ad1c5e authored about 4 years ago by kyowonjeong <[email protected]>
Ensamble spectrum processing added

63304d2e0b3ba924e9c6397924f7066618e175a2 authored about 4 years ago by kyowonjeong <[email protected]>
function rename

0d20b7460de479b32b9edc56d006ea9682299306 authored about 4 years ago by Chris Bielow <[email protected]>
Merge branch 'develop' of https://github.com/OpenMS/OpenMS into toppview_refactor

6e04c7511df333edaa0210e6813e842dc84fbdb4 authored about 4 years ago by Chris Bielow <[email protected]>
Merge branch 'feature/FLASHDeconv' of https://github.com/JeeH-K/OpenMS into feature/FLASHDeconv

343717b8b4e1c6f435061c1937ed9b898f2e4a0c authored about 4 years ago by KyowonJeong <[email protected]>
.

901eaabcf7424f11f34b5163e9681ad8e74e328b authored about 4 years ago by KyowonJeong <[email protected]>
.

951e3371b8340a0e779ab1d041734b066c7f1f19 authored about 4 years ago by kyowonjeong <[email protected]>
.

b41de7619c973cea0542fdd39d35370b3e444f7d authored about 4 years ago by kyowonjeong <[email protected]>
filling of viewWidget with less code

b5d84843b73ff58a164f2f836beeeff5acc6b60f authored about 4 years ago by Chris Bielow <[email protected]>
Merge pull request #4885 from cbielow/toppview_refactor

[FIX] Toppview refactoring with bugfixes

903ae0b348a2298d4266aef7c8360dae35efc695 authored about 4 years ago by Chris Bielow <[email protected]>
.

0e53f0ddf70ce339bac13563a502938c65196b6a authored about 4 years ago by kyowonjeong <[email protected]>
Actually test the import. Patch linux for auditwheel

9a3da3bb65e21fe56ae98391a68228756a1ec95f authored about 4 years ago by jpfeuffer <[email protected]>
Merge pull request #4924 from oliveralka/fix/SwathWizardICNSmacos

SwathWizard icns

b326de239c98348158856edd67e94c69cb88dac3 authored about 4 years ago by jpfeuffer <[email protected]>
Merge pull request #4932 from OpenMS/fix/NSIS_doc

update path to documentation

f4002623f44efc7f927dfcb677078e74881456ac authored about 4 years ago by jpfeuffer <[email protected]>
update path to documentation

4e7313f2741c346ee227f74bbf03ac21e2fe7b46 authored about 4 years ago by Timo Sachsenberg <[email protected]>
[API, TEST, DOC] adding encapsulating member functions to IsotopeLabelingMDVs class

20446c34408b6952efb9372599191e711410f42c authored about 4 years ago by Ahmed Khalil <[email protected]>
remove absolute_import from init.py

55849cd2071b760debca9f17c9a4e8064cedc16b authored about 4 years ago by jpfeuffer <[email protected]>
revert pyopenms package prefix

57308563a6f1f52c93bdad7f93fa6f5a23f110e0 authored about 4 years ago by jpfeuffer <[email protected]>
fix CI

952a8544ead95a2f18a6ef981377d149310b00ac authored about 4 years ago by Chris Bielow <[email protected]>
peakpicking removed in FLASHDeconv.cpp. Instead, aggresive overlapping peak groups in PeakGroupScoring.cpp (isotopologues removed)

b4f82b9ac981ca8c19d5cb98fedf2eee1be3dbb6 authored about 4 years ago by kyowonjeong <[email protected]>
actually use the ms_level

40105e3247e8936ae22ffeb17d274768b0c77924 authored about 4 years ago by Chris Bielow <[email protected]>
fix bug

378d1d795cd668c1b584a6fb246daa1d3f773522 authored about 4 years ago by Chris Bielow <[email protected]>
prefix modules with pyopenms. ?

e85074ba2e4fea32d2ec8f680975f71f5ca7bc9f authored about 4 years ago by jpfeuffer <[email protected]>
[DOC] for some methods

9b957a6d7c23eed36a8c5857b62fc1c441d0673f authored about 4 years ago by Chris Bielow <[email protected]>
make method more generic

2a38ad8309d74f1ec0fc0625f76254b801b58951 authored about 4 years ago by Chris Bielow <[email protected]>
[DOC] show tool tips for SpectraView

[REFACTOR] some refactor
[FEATURE] show text in search box as hint (will disappear when clicked on)

865f98d2b8aed99d221ccd34afded461705e6c9a authored about 4 years ago by Chris Bielow <[email protected]>
fixes #4928

ee29a4354597848954ade882328024aed182e882 authored about 4 years ago by Chris Bielow <[email protected]>
add convenience function

3d040c3ea4f4a3c2811a98429385dac3d0e7c365 authored about 4 years ago by Chris Bielow <[email protected]>
NOP

a66dd9f09cc8b1edd33b4177457fba959dd89f5b authored about 4 years ago by Timo Sachsenberg <[email protected]>
NOP

9b8cc508cfbfe619d1f5670b9f2eb962cb1dfbc8 authored about 4 years ago by Timo Sachsenberg <[email protected]>
FIX: .app execution for installer; Set path to /usr/bin/

34bcf7e5f0f310909ee97ed51b2c79aaddc4586e authored about 4 years ago by oliveralka <[email protected]>
peakpicking added in FLASHDeconv.cpp

3836aa96eb2e08023dd7935b2edea4733fbf07fe authored about 4 years ago by kyowonjeong <[email protected]>
fixes #4926

008d228c09b91daa713557abf4218c76c967af5b authored about 4 years ago by Chris Bielow <[email protected]>
refactor conversion

510353d32a8acd96332cd548edb85429a594ebae authored about 4 years ago by Chris Bielow <[email protected]>
refactor Chrom display

ad5cf3c1ff5bdd5a645cbf27a0ef0d9b42177aa3 authored about 4 years ago by Chris Bielow <[email protected]>
minor refactor

b51d770148f173caacf3c1382a4064094e9b9a7d authored about 4 years ago by Chris Bielow <[email protected]>
[API, DOC] updating references and documentation for IsotopeLabelingMDVs class, adding member function prototypes

e538ad49cddeddb562f53cb7e89afc320a8c02af authored about 4 years ago by Ahmed Khalil <[email protected]>
fix wildcard

1752b1bcb8bb10ffeb41e0f61bce3313e7ca009c authored about 4 years ago by jpfeuffer <[email protected]>
fix Qt install name

1726627a6c291c86b2a133d707cbfbd64ceaf7ec authored about 4 years ago by jpfeuffer <[email protected]>
Check Qt install names

a1c5214c266f745ae38d39866b7ae160b086a98a authored about 4 years ago by jpfeuffer <[email protected]>
Try binding and embedsignature

1851a05cf81ba3524582cf1727630675989d90e5 authored about 4 years ago by jpfeuffer <[email protected]>
multithreading in FLASHProFilter

d09b9161a9f299127ffdb7edee74412283829b08 authored about 4 years ago by kyowonjeong <[email protected]>
macOS high res

937dac2d6fa8486848f6fc26a1b0c3ed4e90df44 authored about 4 years ago by oliveralka <[email protected]>
revert import change

32709e48338230450d0acc2f38dcf1bba9629d3b authored about 4 years ago by jpfeuffer <[email protected]>
Use language_level depending on python version

1937e97a8b581867b040460af264748b936f11a3 authored about 4 years ago by jpfeuffer <[email protected]>
SwathWizard icns

0e2142d761999286c981a9116f91823c520af4fb authored about 4 years ago by oliveralka <[email protected]>
try with pyopenms.submodule

553b750d6a2e8a078869749ef28d85768d958c52 authored about 4 years ago by jpfeuffer <[email protected]>
minor rework

77f9d9f833191d61f921de155fd487e8ba2219b9 authored about 4 years ago by Chris Bielow <[email protected]>
Test all_modules

be5ea29f6cccb99893ef09d0afcd53ed52c1b10c authored about 4 years ago by Oliver Alka <[email protected]>
fix layer name of single chromatograms by always using filename as basename instead of old layer name (before, the `[index]` was stacking up, when switching between chroms, .e..g file[1][2][1] ...)

c3881e0ceb3ab2d8e359fb27beade90fe22dfb9a authored about 4 years ago by Chris Bielow <[email protected]>
avoid QMdiArea::activeSubWindow because it might be nullptr if TOPPView is not active.

9fc1c1018f1d7627660946082b8f6fc08fc114aa authored about 4 years ago by Chris Bielow <[email protected]>
public member to method (allow for breakpoints)

e00ff787a3141be6d75a3fe7894b28221841997f authored about 4 years ago by Chris Bielow <[email protected]>
fix disabled tab

a49a7c2d1265189ead795b89d7e10e34ba025ffc authored about 4 years ago by Chris Bielow <[email protected]>
oops

8eba8168af0025f0d24deb955e1e8cee856af1ab authored about 4 years ago by Julianus Pfeuffer <[email protected]>
multithreading in FLASHProFilter

0a0e80d8272fc8dc63d92866e02ea82158d560a0 authored about 4 years ago by kyowonjeong <[email protected]>
add correct import

65e5ebd3b5bfc4a81e911204866d09b8e4c5523c authored about 4 years ago by Julianus Pfeuffer <[email protected]>
activate GH actions

9a5ccf647bdaccc9e2c781acc54df3673915125f authored about 4 years ago by jpfeuffer <[email protected]>
level 3

c509c50bab9b9586af7d63ce4bf7b53ae06bdeaf authored about 4 years ago by jpfeuffer <[email protected]>
Update setup.py

26c850c6bf0f251b6bddc039c2fdc8729e4e410c authored about 4 years ago by jpfeuffer <[email protected]>
Update IdXMLFile.h (#4919)

5098fb0a209cfd94eea247d8e59b6942924fe7c9 authored about 4 years ago by Timo Sachsenberg <[email protected]>
[FEATURE] FIAMS CV params in mzML (#4909)

* [FEATURE] FIAMS CV params in mzML

* Update MzMLFile_1.mzML

* Update MzMLFile_test.cpp

...

d49f82e005a770bf21278b516cbcbefdb8bb48eb authored about 4 years ago by jpfeuffer <[email protected]>
updated OpenSWATH param changelog (#4915)

86df9be8a91dec7b2724f60af5448b099d7c9e60 authored about 4 years ago by Timo Sachsenberg <[email protected]>
Merge pull request #4916 from cbielow/QC_example

[DOC] make QC workflow runnable on examples

43dd3703e275b8bf5f9c42b967c4604c4b261dba authored about 4 years ago by Chris Bielow <[email protected]>
add FASTA DBs for QC

646b4b8d0024535d4cd9a1daea1af08923c3909f authored about 4 years ago by Chris Bielow <[email protected]>
make QC example runnable

bb717df73408ebda44d4795b6719fb6f8b9887e4 authored about 4 years ago by Chris Bielow <[email protected]>
New OpenSWATH parameters (#4153)

* codeship

* codeship 2

* codeship parallel 2

* codeship test

* XServer

* fix

...

663c0662cdf483976729c779632e4f968a8c9ac3 authored about 4 years ago by Hannes Roest <[email protected]>
Addon changes for pyopenms (#4892)

* Update function names in addons/ConveHull2D.pyx

* Update function name align in addons/MapA...

0edeedbd0f8d0b784af9ab48d4cbc65273c0a22e authored about 4 years ago by Shekhar Shukla <[email protected]>
[API, TEST] implemention and testing for IsotopeLabelingMDVs::calculateMDVAccuracy

04b3a70499e703f885d8e57ba6d19c979f968fb9 authored about 4 years ago by Ahmed Khalil <[email protected]>
[FIX] fix error in SQLite-based ID file format (constraint on optional table)

10bf87afba1071d675047920ff8841f042071720 authored about 4 years ago by Hendrik Weisser <[email protected]>
Merge pull request #4908 from cbielow/fix_stopwatch

[FEATURE/FIX] re-implement StopWatch to allow for 'resume()' and querying time while still running

b05b534a597199517f2a2be792425e07ab7bf902 authored about 4 years ago by Chris Bielow <[email protected]>
fix missing symbol

66f67aacabb16c941eaa3090d7daa215e2a03c54 authored about 4 years ago by Chris Bielow <[email protected]>
[FIX] fix error message in 'AASequence' (mod. not found)

8029c9d17da6b1c2f7bcc2481a660a9a6a05adba authored about 4 years ago by Hendrik Weisser <[email protected]>
avoid multiple definition warning

b43cfbf756a873d736f524298f4054d818ab0a24 authored about 4 years ago by Chris Bielow <[email protected]>
unused variable fix

b0d45db31382e4f210c8c5fdb405bfa40f56a83e authored about 4 years ago by Chris Bielow <[email protected]>
Merge branch 'develop' of https://github.com/OpenMS/OpenMS into idfile-integration

889a0adea92c688a23e434102b2b65bc04e844ad authored about 4 years ago by Hendrik Weisser <[email protected]>
CI fixes

2edacdef0b625a02090ec8e809a856ef6598bc8c authored about 4 years ago by Chris Bielow <[email protected]>
fix CI errors

ec89d8e9a4327f6a13583238a00f3b3e4db231bb authored about 4 years ago by Chris Bielow <[email protected]>
add FLASHProFilter in topp

ec50d05094010b5ed9458774e60566eefb01812e authored about 4 years ago by kyowonjeong <[email protected]>
move implementation to cpp

8e0121631ba525421c4a617114db066b80011700 authored about 4 years ago by Chris Bielow <[email protected]>
[DOC] Param changelog for 2.6 (#4910)

* [DOC] Param changelog for 2.6

* Update CHANGELOG

7b85bfbd6e08bf8cd724e1259c46683ce3b9cbbe authored about 4 years ago by jpfeuffer <[email protected]>
fixing dll import/export

589f115d94f68a2dd42236de1127c83819e05dc9 authored about 4 years ago by Chris Bielow <[email protected]>
refactor ViewTab-Widgets into separate class

5fc8db65ed4618b2b1b63dc615e816e30c2cd5cd authored about 4 years ago by Chris Bielow <[email protected]>
added missing endProgress() calls

ef0757bf24038fb72db95450c343999d57476701 authored about 4 years ago by Chris Bielow <[email protected]>
remove invalid nested progresslogger

609e1937b332c476d9180a13b6a464054fd258d6 authored about 4 years ago by Chris Bielow <[email protected]>
fix

a921ed8b19cb21e68b560f3fc95a9536e2166452 authored about 4 years ago by Chris Bielow <[email protected]>
fix

c91bcc3f36bd05a3dae99912a7bea68c5f173f79 authored about 4 years ago by Chris Bielow <[email protected]>