Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/OpenMS/Tutorials

Tutorials as used in the user meetings. (Please assign a git tag for the revision used for the UM)
https://github.com/OpenMS/Tutorials

Archive/Rename OpenMS/Tutorials repository?

tapaswenipathak opened this issue over 2 years ago
QC_with_OpenMS R View fails on linux when given absolute path

poshul opened this issue over 3 years ago
[FIX] Metabolite_DeNovoID WF

oliveralka opened this pull request over 3 years ago
Remove deprecated Excel writers

jpfeuffer opened this issue over 3 years ago
Split collection column missing for Molecule Type Cast

jpfeuffer opened this issue over 3 years ago
Updated workflows for OpenMS 2.7

oliveralka opened this pull request over 3 years ago
Update outdated figures

oliveralka opened this issue over 3 years ago
ProteomicsLFQ

oliveralka opened this issue over 3 years ago
SIRIUSAdapter + HighResPrecursorMassCorrector

oliveralka opened this issue over 3 years ago
[FIX] minted float env

oliveralka opened this pull request over 3 years ago
Placement of code examples via minted

oliveralka opened this issue over 3 years ago
[FIX] OSW Metabolomics

oliveralka opened this pull request over 3 years ago
[ADD] tutorial-ci

oliveralka opened this pull request over 3 years ago
[ADD] tutorial-ci

oliveralka opened this pull request over 3 years ago
Improve PyOpenMS Tutorial

oliveralka opened this issue over 3 years ago
TODOs for HTML version

jpfeuffer opened this issue over 3 years ago
[Feature] html version with tex4ht

jpfeuffer opened this pull request over 3 years ago
OpenMS 2.7: Update WF related to Sirius

oliveralka opened this pull request over 3 years ago
OpenSWATH for Metabolomics - DIAMetAlyzer

axelwalter opened this issue almost 4 years ago
[Update] PhosphoID

oliveralka opened this pull request about 4 years ago
Fixing bugs in Phosphoproteomics ID workflow

JeeH-K opened this pull request about 4 years ago
Phosphoproteomics_ID

oliveralka opened this issue about 4 years ago
Release/2.6.0

jpfeuffer opened this pull request about 4 years ago
Some of the OpenMS FileConverter requirements might be missing.

sorenwacker opened this issue about 4 years ago
Update handout with ThermoRawFileParser

Leon-Bichmann opened this pull request over 4 years ago
simple Phospho ID

timosachsenberg opened this pull request over 4 years ago
update OpenSwath.knwf for 2.6.0 release

Leon-Bichmann opened this pull request over 4 years ago
exporting results of identification and quantitation as a table

pavel-shliaha opened this issue over 4 years ago
[DRAFT] OpenSWATH for Metabolomics

oliveralka opened this pull request over 4 years ago
Draft version of an ID only Phosphoproteomics workflow

timosachsenberg opened this pull request over 4 years ago
proteomics lfq workflow with MSStats

timosachsenberg opened this pull request almost 5 years ago
[DRAFT] ProteomicsLFQ, current with lfq_spikein_dilution

oliveralka opened this pull request almost 5 years ago
update Versions

jpfeuffer opened this pull request almost 5 years ago
fil missing in example data

johanneswellmann opened this issue almost 5 years ago
[FIX] general

oliveralka opened this pull request about 5 years ago
Update handout.tex

timosachsenberg opened this pull request about 5 years ago
GCB 2019

jpfeuffer opened this issue over 5 years ago
File missing in example data

jylanwhu opened this issue over 5 years ago
Workflow for isobaric analysis (untested)

oliveralka opened this pull request over 5 years ago
Identification / Quantification

oliveralka opened this pull request over 5 years ago
[Feature] Test Workflow-relative paths

jpfeuffer opened this pull request over 5 years ago
Boston19: XTandem scores cannot be fitted in consensus ID workflow

jpfeuffer opened this issue over 5 years ago
Metabolomics

oliveralka opened this issue over 5 years ago
Boston 2019: map aligner pose clustering crashes

timosachsenberg opened this issue over 5 years ago
remove consensusmap normalizer from iprg

timosachsenberg opened this issue over 5 years ago
Boston 2019

timosachsenberg opened this issue over 5 years ago
[Update] SiriusAdapter

oliveralka opened this pull request over 5 years ago
KNIME R Home issue (Linux, MacOS)

oliveralka opened this issue almost 6 years ago
Identification view: add how to save single spectrum in mzML

timosachsenberg opened this issue almost 6 years ago
pyopenms dir and help

Leon-Bichmann opened this pull request about 6 years ago
[UPDATE] First changes EuBIC2019

oliveralka opened this pull request about 6 years ago
Add date to handout

oliveralka opened this issue over 6 years ago
Update metabolomics.tex

FabianAicheler opened this pull request over 6 years ago
Update gettingstarted.tex

timosachsenberg opened this pull request over 6 years ago
[ADD] MAD

oliveralka opened this pull request over 6 years ago
Feature/um2018

timosachsenberg opened this pull request over 6 years ago
Update metabo KNIME workflow

mrurik opened this pull request over 6 years ago
initialized default values for new parameters

enetz opened this pull request over 6 years ago
Escape underscores

jpfeuffer opened this pull request over 6 years ago
General fixes

jpfeuffer opened this pull request over 6 years ago
[Update] metabolomics workflows 2.4.0

oliveralka opened this pull request over 6 years ago
Updated proteomics WFs to 2.4

jpfeuffer opened this pull request over 6 years ago
[DRAFT] Add SiriusAdapter (metabolomics)

oliveralka opened this pull request over 6 years ago
Feature/boston2018

timosachsenberg opened this pull request over 6 years ago
[FIX] update figure 13 and ref

oliveralka opened this pull request over 6 years ago
Fix/pwizard image

Leon-Bichmann opened this pull request over 6 years ago
add Proteomics megaworkflow; remove old subworkflows

FabianAicheler opened this pull request over 6 years ago
OMSAA 10 ppm to 5 ppm

FabianAicheler opened this pull request over 6 years ago
Metabo KNIME workflow picture is outdated

jpfeuffer opened this issue over 6 years ago
Loading MSStats missing

jpfeuffer opened this issue over 6 years ago
Figure 13 wrong naming of input ports

timosachsenberg opened this issue over 6 years ago
Update msConvert image

timosachsenberg opened this issue over 6 years ago
Boston18stuff

FabianAicheler opened this pull request over 6 years ago
Changes Tutorial iPRG

oliveralka opened this pull request over 6 years ago
R installation instructions at more sensible place

FabianAicheler opened this pull request over 6 years ago
very long nightly path needs more space -> deitemize

FabianAicheler opened this pull request over 6 years ago
PCA replace ggbiplot to ggfortify -> update import

FabianAicheler opened this pull request over 6 years ago
Draft for MSstats iPRG tutorial

oliveralka opened this pull request over 6 years ago
MSstats installation

mrurik opened this pull request over 6 years ago
Mention that you have to double-click a workflow after you import it

jpfeuffer opened this issue about 7 years ago
Remove part where one needs to copy the spectral library in the plugin folder.

timosachsenberg opened this issue about 7 years ago
Better explain the manual validation of Matched Metabo spectra

jpfeuffer opened this issue about 7 years ago
Add column header to Excel Writer

jpfeuffer opened this issue about 7 years ago
Joining of columns node should be better explained

timosachsenberg opened this issue about 7 years ago
Metabo Workflow more tipps on how to inspect consensusXML

timosachsenberg opened this issue about 7 years ago
Rephrase task 3) in 3.3.2

jpfeuffer opened this issue about 7 years ago
Advanced parameters are grey in table - some thought it is disabled

timosachsenberg opened this issue about 7 years ago
Highlight in FeatureFinderMetabo settings that some parameters are advanced

timosachsenberg opened this issue about 7 years ago
Mark topics like smiles & RDKit as "Digression"

timosachsenberg opened this issue about 7 years ago
Catch-up points

timosachsenberg opened this issue about 7 years ago
gplots in Metabo workflow not compatible with shipped R bins on Win

jpfeuffer opened this issue about 7 years ago
Programmer tutorial

hroest opened this issue about 7 years ago
Better explain settings of Joiner node in Metabo WF

jpfeuffer opened this issue almost 8 years ago
Run your pipeline and inspect your results... on p.30

timosachsenberg opened this issue about 8 years ago
Java version check possibly errornous

timosachsenberg opened this issue over 9 years ago