Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

github.com/OpenMS/build-scripts

Holds the scripts for setting up basic platform specific (but machine independent) environments to build OpenMS for different purposes.
https://github.com/OpenMS/build-scripts

remove UTIL from build scripts

17043bb70ab2be1d92f17ab00550ba587584dd20 authored over 1 year ago by Timo Sachsenberg <[email protected]>
update build scripts

89384282cdf836c6c35133e001c10650ef2df50c authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update CTestCustom.cmake

Decrease max errors reported and increase the size of the output for each

c722107b0064694af307600f0b8fb113378af2b4 authored over 1 year ago by Samuel Wein <[email protected]>
Update run_tests.cmake

escape semicolons

21fcbc3246995dc112974db58fa411ace041b80a authored over 1 year ago by Samuel Wein <[email protected]>
fix recent brew path changes

51efa96bd711bb4eaceee6c3962e5001817ef65a authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update installBuildTools.sh

2ce8983555fff33b20524894f677a13fe2a59731 authored over 1 year ago by Samuel Wein <[email protected]>
Update installBuildTools.sh

b871cec19454d0f6fb5875df2c358b0ce4aec1a9 authored over 1 year ago by Samuel Wein <[email protected]>
Update installBuildTools.sh

Fix handling of brew in non-default location

ace6e46712bb17ba8f6348a681edbc23c979e165 authored over 1 year ago by Samuel Wein <[email protected]>
Update run_tests.cmake

b4b767e93454ab3b7d96e8f55531969ac57a5745 authored almost 2 years ago by Timo Sachsenberg <[email protected]>
disable SSL verifycation again

a11e6753e115d123a26e0c9d4f6ca1bf384c93c5 authored about 2 years ago by Timo Sachsenberg <[email protected]>
Update installCMake.sh

cf2135b301e46ee991bfb11ec320a1ba044b7260 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update setup_and_test_openms.sh

f0b92bd56158748ed437fc88ad0f97b420fbd3e0 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
update cmake

b279a2e502f977cc20db4fb6deabcddbbba51b02 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
also disable peer verfication

d79011c3a3bd7c04287802025c8d5654d6cdad48 authored about 2 years ago by Timo Sachsenberg <[email protected]>
set CTEST_CURL_OPTIONS CURLOPT_SSL_VERIFYHOST_OFF

0ba5638e001f2d76754d777d0053012f2ff9e3ca authored about 2 years ago by Timo Sachsenberg <[email protected]>
Update package_test.cmake

Change Mac to use dist for CMake >3.5

7c0fec95e719d08b45ff8ab5caf71d15e484dee4 authored about 2 years ago by Samuel Wein <[email protected]>
Update package_test.cmake

Produce `finalized_dist` for apple.

99c1168bd7aba096fced9239ae711134d728fc78 authored about 2 years ago by Samuel Wein <[email protected]>
Disable signing on Mac

We are not supporting signing on Mac.

b53360844a935c3e3d7e5a33f3c78701684d321a authored about 2 years ago by Samuel Wein <[email protected]>
Merge pull request #15 from axelwalter/patch-3

correct regex for SIRIUS version check

dbc69db2f283153fe4a9470d1ce10b05244149cc authored about 2 years ago by Julianus Pfeuffer <[email protected]>
correct regex for SIRIUS version check

9a3e67b5bbfe4ea9234c6a06b880139c57c08b53 authored about 2 years ago by axelwalter <[email protected]>
Merge pull request #14 from axelwalter/patch-2

enable SIRIUS tests

293a2ea0509a5b2a2c9a42bb175bb628adb94db5 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
enable SIRIUS tests

With the updated THIRDPARTY (SIRIUS 5.6.1 snapshot) the changes to SiriusAdapter in PR #6357 sho...

96c8944c7f6e519c035087762f03c528b4cd914f authored about 2 years ago by axelwalter <[email protected]>
remove ALL sqlite files on linux (since they come with qt)

a703c3c074fd625b84f047292b1208bae389c666 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
add publicly visible sqlite to qt installation

0bfbe5e2a93039ae36093c54bea4ce9b4a0a3329 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
add publicly visible sqlite3 to qt installation

00636ec32b4d2ecf428a4bb9bfdbbf147414d836 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update prepareOpenMSBuild.sh

8f519ef77eaa4ccd0cbca881b76f56ec7cd1c3dc authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update prepareOpenMSBuild.sh

bb98d49dcab221814c5e4a93481a5ca7ce787a26 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Try to not install/delete Sqlite on Linux

3d711e320038268b5a99c6ab15a303b65595ca9b authored about 2 years ago by Julianus Pfeuffer <[email protected]>
actually update URL to new server

93e4b170f06b2310d30bd52d14fb681b84d3c994 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
[REFACTOR] update archive URLs

f72fc34745ed984936ac50e1bfa4edcb9d0f49f3 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #13 from OpenMS/install_qtsqlite

install libqt5sql5-sqlite on Ubuntu 20.04

1b1a5de6f0a921caea2e214008bbdbe0114c7ef2 authored over 2 years ago by Timo Sachsenberg <[email protected]>
install libqt5sql5-sqlite on Ubuntu 20.04

b30a47ad2e2070dc842a49de3fc98a27cd95b70c authored over 2 years ago by Timo Sachsenberg <[email protected]>
Create README.MD

797ea61ea084dcdac939bebc8251e707be49ed84 authored over 2 years ago by Timo Sachsenberg <[email protected]>
upgrade doxygen version

because of failing CI on ubuntu 20.04

8a19079a0f06ee7e54c899a9c447e50770f8f878 authored over 2 years ago by Timo Sachsenberg <[email protected]>
fix wrong package repository in 20.04

7493270d1855f8948da35ff79e2a87d2f6932a9a authored over 2 years ago by Timo Sachsenberg <[email protected]>
add ubuntu 20.04 dependencies

6632beed6c2219aadf41d898065420bb5910daa9 authored over 2 years ago by Timo Sachsenberg <[email protected]>
spelling sirius_test

75939240d93a33337c8b5d06fb226844629472be authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Set Sirius tests to OFF directly in the cache

59e2bdf85ff8ab207589fc99c062f2706003727d authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #12 from axelwalter/patch-1

temporarily disable SIRIUS tests

953b757b8b08678c16c08ee497499acaf7862538 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
temporarily disable SIRIUS tests

until issues with SIRIUS 5 have been resolved

bad8496bcbd3f0405eb27132034bb478a938898b authored over 2 years ago by axelwalter <[email protected]>
Update prepareOpenMSBuild.sh

2d1bdd0c40524aa43293b05cb3d2f4f4ee334307 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
full path for sirius version check

4c333227a91372c1669eab0ca6c5f7746da97469 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
full path and additional messages

fe6f7a1705cd93ba99523aaa1ee28e1c5435b301 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
fix if case

3679035d94befa2c4d3140bd079821d6a9d064a1 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
forgot a "then"

02054dc240b16a101e63ad4b4a66474b93c5f198 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Add login functionality for Sirius

85889306d235cb08cfebf39f39229bcf91236ad5 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
add pytest for transition period

c3cd38535529e3edf81b863575deac95adbaf897 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Update setup_and_test_openms_oldstyle_mac.sh

b657366099e2005987ad03c3950cb1f249cd40e1 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Update setup_and_test_openms.sh

676617487a45ab5e6a6ce6156e2ab8c9c9f25389 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
allow specifying boost use static

4c35b5e966a8c3a979dd621181f41d5f77cca091 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Update external_code.cmake

41a4d72e17d518a6efdf78b0917ef7e9fc361e8c authored almost 3 years ago by Julianus Pfeuffer <[email protected]>
fix escaping in external test

02d702e23b48da2a0f73ed54c8a69fca1f56738a authored almost 3 years ago by Julianus Pfeuffer <[email protected]>
Update external_code.cmake

ff63b3f30be58bf7d6ce233f9da66aae0e078a7c authored almost 3 years ago by Julianus Pfeuffer <[email protected]>
Update external_code.cmake

a700f74feadf81fa200ded4b11ee9fa84108d22b authored almost 3 years ago by Julianus Pfeuffer <[email protected]>
Update external_code.cmake

34ae40efe9c285bab83cc033aa934e22a7472704 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>
Update external_code.cmake

946700f73c5add3bca302dc1fb9603d60a2122e0 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>
add contrib lib path to external test

2523aa43df38374eccb6be8911052326015b0cd2 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>
reduce max. size of each test output

3c594f2f9fb7afc281adaef9a4d846888be6daea authored almost 3 years ago by Julianus Pfeuffer <[email protected]>
Upgrade CMake to 3.18.6

5473fa765bf6558597196c69a42815d6ef08c068 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>
Reduce warnings to not overload CDash. Exclude some thirdparty headers

d4dd918d324bd2e924d42739515c23d38b528e36 authored about 3 years ago by Julianus Pfeuffer <[email protected]>
Install pandas for pyopenms

58e1f10eba284defe56f739cfdd1479d68366ad4 authored about 3 years ago by Julianus Pfeuffer <[email protected]>
cert problems

5c19d504b96cc6a8de670557110bdb33372b8548 authored about 3 years ago by Julianus Pfeuffer <[email protected]>
add CLANG_TIME_TRACE to cache if present

e962356a1a2a0034ad11238a356c2c34c6072335 authored over 3 years ago by Julianus Pfeuffer <[email protected]>
comma to semicolon in for IWYU param

619963eaebfbebffae90aff817fd7eb5d8ec26db authored over 3 years ago by Julianus Pfeuffer <[email protected]>
IWYU test

4e3f0d40b2940482a949e15fc97fc28b726bd47d authored almost 4 years ago by Julianus Pfeuffer <[email protected]>
Update installDocuTools.sh

d84eb8973f51e5f270c76ddca82891a320089582 authored over 4 years ago by jpfeuffer <[email protected]>
Update installQT5.sh

dd08061e149df87a3fceda45439148c81d105d21 authored over 4 years ago by jpfeuffer <[email protected]>
Update installQT5.sh

599baef9902aa4d99e56fd17571d7753489c8a97 authored over 4 years ago by jpfeuffer <[email protected]>
Update installDocuTools.sh

bced7f59806c3704a608b8543c4cee1caf93bd98 authored over 4 years ago by jpfeuffer <[email protected]>
Update link to still install the last working doxygen version 1.8.16

15211821eabbc44207702fd61d1bf42243e098da authored over 4 years ago by jpfeuffer <[email protected]>
follow redirects when downloading doxygen

22f5dd71b21bfa85a280b78f2f980a91a024da91 authored over 4 years ago by jpfeuffer <[email protected]>
Update doxygen version and download link

6e927770704bcc2210dd63ce6f36a620e717852d authored over 4 years ago by jpfeuffer <[email protected]>
changes to passing options to external code tests

f9835352aead0bf3c0ec18cabdb9b34eae172b0b authored over 4 years ago by Builder <[email protected]>
Update external_code.cmake

3d3bc05054eca2105af5a0327e5f68449b06f52f authored over 4 years ago by jpfeuffer <[email protected]>
Update external_code.cmake

fb009b15164dfa231890a350e10d9c4fb53fe070 authored over 4 years ago by jpfeuffer <[email protected]>
Test

fb9b1019005b84a442ba5861845e06baf9f68b25 authored over 4 years ago by jpfeuffer <[email protected]>
Update external_code.cmake

b32edca091441244eb370c364db58bcb12b001d9 authored over 4 years ago by jpfeuffer <[email protected]>
seperate options for external tests

d936172f2ba340e6561296c507be2ed8a7b1f3b5 authored over 4 years ago by jpfeuffer <[email protected]>
openmsconfig.cmake is in root of build folder

02e1d833459ec01127a280b83da35b516a7cffdf authored over 4 years ago by jpfeuffer <[email protected]>
Add OpenMS Dir as parameter as well

b76381f887ef1e313ac9ee27ad58be8bedc077f4 authored over 4 years ago by jpfeuffer <[email protected]>
Update external_code.cmake

db34a5302dce234e24d5dd2e2153218979b6fb91 authored over 4 years ago by jpfeuffer <[email protected]>
Skip ctest update?

Maybe this makes the ctest run fail?

06475e4d305bc1e4e33da6853765da3708905f8a authored over 4 years ago by jpfeuffer <[email protected]>
dont empty bin dir for external tests

7d0f203761a957cee058bd9432351d62efa5b6da authored over 4 years ago by jpfeuffer <[email protected]>
Update external_code.cmake

d56025fc22722a2dc08cef9e504e4fdf57a41e1f authored over 4 years ago by jpfeuffer <[email protected]>
Add Architecture flag to CMake calls on Win

2985d95b898b357725b25d3650d8025c7d4fbc20 authored almost 5 years ago by jpfeuffer <[email protected]>
Update installLatex.sh

357a4db7896e2cdf1ce14323c52cbca75633c3e4 authored almost 5 years ago by jpfeuffer <[email protected]>
Do not use Generator arch suffix for CMake anymore

262cd1dfb783b21a5061cbfa93f50049c37ed1d3 authored almost 5 years ago by jpfeuffer <[email protected]>
Do not use Generator suffix for CMake anymore

2d365f4e9cec1968deaafdd47d87f452d36b7edd authored almost 5 years ago by jpfeuffer <[email protected]>
Add CMAKE_GENERATOR_PLATFORM (toolchain file equiv. for "-A" option)

f8f4143be64cfe1eb09561c7dad15bd20b15c125 authored almost 5 years ago by jpfeuffer <[email protected]>
Update installCompiler.sh

347345c1636cfd8538763e8bed1e1085a2ae13fe authored about 5 years ago by jpfeuffer <[email protected]>
update generator names for vs

0429fb33d5fa20ab8df5347fa0c335bf6db55ae2 authored about 5 years ago by jpfeuffer <[email protected]>
Update installQT5.sh

a20d4ba05f7519c7ab98339aa61f3cfe544d97d8 authored about 5 years ago by jpfeuffer <[email protected]>
Allow api compatible Qts for MS VS 2019

73ef54d1c3bb9a70d44f6c8c6f59b9147e4f3347 authored about 5 years ago by jpfeuffer <[email protected]>
Update package_test.cmake

1074321f3a0f7e43c7c42f8f75e91b5fb660abe4 authored about 5 years ago by jpfeuffer <[email protected]>
optional signing email variable

c4802aa04153c292dc96c62a1eeb77d4bd3eb652 authored about 5 years ago by jpfeuffer <[email protected]>
Update installContribBuildTools.sh

1ae32ceaddf077beaaa9fdb7ade5fc3d439f7f6c authored about 5 years ago by jpfeuffer <[email protected]>
Update inferSystemVariables.sh

34243707548f74efcb8f2a1fbfbc2048741e758c authored about 5 years ago by jpfeuffer <[email protected]>
Update installContribBuildTools.sh

c0ba2fc0c0dfb0214f8cb7a49478d256053e12dc authored about 5 years ago by jpfeuffer <[email protected]>
Update installContribBuildTools.sh

56dda5e22aec4f79db73373847df2535108ee81f authored about 5 years ago by jpfeuffer <[email protected]>
Update installCMake.sh

0c0cdfef5513682312ea3f8c02cc657ce811b029 authored about 5 years ago by jpfeuffer <[email protected]>