github.com/OpenMS/contrib issues | Ecosyste.ms: OpenCollective

New release broke GHA pipelines

jpfeuffer opened this issue about 2 months ago

use contrib sources from contrib-sources github release

timosachsenberg opened this pull request 8 months ago

bump release action version

poshul opened this pull request 8 months ago

manylinux update

jpfeuffer opened this pull request 8 months ago

Update main.yml

timosachsenberg opened this pull request 8 months ago

add manual contrib release step

timosachsenberg opened this pull request 10 months ago

create release

timosachsenberg opened this pull request 11 months ago

update eigen to 3.4.0

timosachsenberg opened this pull request 11 months ago

docker: refactor manylinux Dockerfile

radusuciu opened this pull request 11 months ago

Optimize Dockerfile

radusuciu opened this pull request 12 months ago

Timosachsenberg patch 2

timosachsenberg opened this pull request almost 2 years ago

Fix/deploy docker

timosachsenberg opened this pull request almost 2 years ago

Fix/deploy docker

timosachsenberg opened this pull request almost 2 years ago

checkout repo to get context

timosachsenberg opened this pull request almost 2 years ago

Docker actions broken after moving dockerfiles

jpfeuffer opened this issue almost 2 years ago

remove OpenMS checkout from contrib

timosachsenberg opened this pull request almost 2 years ago

update manylinux action

timosachsenberg opened this pull request almost 2 years ago

Dockerfiles from OpenMS/dockerfiles have been moved to contrib/docker…

KyowonJeong opened this pull request almost 2 years ago

Fix xerces icu

cbielow opened this pull request almost 2 years ago

Remove set-output from actions

poshul opened this pull request almost 2 years ago

Deploy docker image (ubuntu) to ghcr.io uses the deprecated "set-output" command

poshul opened this issue almost 2 years ago

CoinOR config.guess not able to guess for newer OSes

jpfeuffer opened this issue about 2 years ago

Do not use zstd/lzma in boost

jpfeuffer opened this pull request about 2 years ago

Update deploy-manylinux-docker.yml

poshul opened this pull request about 2 years ago

[FEATURE] Allow list of buildtypes

jpfeuffer opened this pull request about 2 years ago

remove GLPK from default ALL target

jpfeuffer opened this pull request about 2 years ago

[Restructure] Licenses and remove WM5 from ALL

jpfeuffer opened this pull request about 2 years ago

Do NOT use manylinux Dockerfile here!

jpfeuffer opened this issue over 2 years ago

Trigger contrib submodule update in OpenMS

timosachsenberg opened this issue over 2 years ago

slimmer CoinMP package without the precompiled libs

cbielow opened this pull request over 2 years ago

fix CoinOr to support VS2022

cbielow opened this pull request over 2 years ago

Build boost without unnecessary thirdparties

jpfeuffer opened this issue over 2 years ago

[Update] boost and coinor for VS22

Waschi97 opened this pull request over 2 years ago

Feature/update cmake version

timosachsenberg opened this pull request about 3 years ago

Build libomp dynamic

oliveralka opened this pull request over 3 years ago

[ADD] openmp

oliveralka opened this pull request over 3 years ago

[ADD] set zlib osx deployment target (cmake)

oliveralka opened this pull request over 3 years ago

remove seqan 1 from contrib

timosachsenberg opened this pull request almost 4 years ago

fix handling of free slacks

bertrandboudaud opened this pull request almost 4 years ago

add seqan-c17

jpfeuffer opened this pull request almost 4 years ago

[FIX] Disable error for warnings in HDF5 under AppleClang12

jpfeuffer opened this pull request almost 4 years ago

Boost fails to build under macOS 10.15.6

lars20070 opened this issue over 4 years ago

Include the hdf5-config.cmake if generated

jpfeuffer opened this issue over 4 years ago

[FIX] add boost patch for xcode 11.4

jpfeuffer opened this pull request over 4 years ago

[FEATURE] make xerces build with hidden symbols by default

jpfeuffer opened this pull request almost 5 years ago

Fixed passing of macosx deployment target

jpfeuffer opened this pull request almost 5 years ago

Only add architecture option if not a Win64 Generator

jpfeuffer opened this pull request almost 5 years ago

quotes

jpfeuffer opened this pull request almost 5 years ago

build fails on Windows for 2.5 Release

hroest opened this issue almost 5 years ago

Start using -A instead of the now deprecated Generator suffix

jpfeuffer opened this pull request almost 5 years ago

[FEATURE] GitHub actions

jpfeuffer opened this pull request about 5 years ago

MacOS sysroot for Boost

jpfeuffer opened this issue about 5 years ago

[FEATURE] Boost 1.71 since 1.67 and 1.69 have compile problems on AppleClang 11

jpfeuffer opened this pull request about 5 years ago

Eigen Fails to Install

singjc opened this issue over 5 years ago

[Update] boost to 1.67

jpfeuffer opened this pull request over 5 years ago

Update Boost to allow VS2017 U3 and VS2019

jpfeuffer opened this issue over 5 years ago

[FIX] debug libs for hdf5

hroest opened this pull request over 5 years ago

minor doc

cbielow opened this pull request over 5 years ago

Discrepancy (CMakeLists.txt and source packages)

oliveralka opened this issue over 5 years ago

Feature/hdf5

hroest opened this pull request over 5 years ago

Add proper CoinOR debug libs for VisualStudio 2017

cbielow opened this pull request almost 6 years ago

[FIX] Patch for compiler bug, mistaking < operator for template.

jpfeuffer opened this pull request about 6 years ago

Seqan 1.4.1 not compilable with gcc 4.6 to 5.x

jpfeuffer opened this issue about 6 years ago

[Feature] Retry download

jpfeuffer opened this pull request about 6 years ago

Try to avoid ICU dependency through boost

jpfeuffer opened this pull request over 6 years ago

Retry mechanism for the source downloads

jpfeuffer opened this issue over 6 years ago

[FEATURE] Check compiler version

jpfeuffer opened this pull request over 6 years ago

Add ICU as requirement or additional contrib

jpfeuffer opened this issue over 6 years ago

Windows: check consistency of cl.exe and Generator

cbielow opened this pull request over 6 years ago

contrib builds boost in 32 bit instead of 64 bit

Vikash-N opened this issue over 6 years ago

[Feature] Enable Boost system and thread

jpfeuffer opened this pull request over 6 years ago

[FIX] fix zlib rpath on Mac right after build

jpfeuffer opened this pull request over 6 years ago

[Update] zlib 1.2.11

jpfeuffer opened this pull request over 6 years ago

[FIX] linux fix

hroest opened this pull request almost 7 years ago

SQLite fails to build on CentOS

hroest opened this issue almost 7 years ago

[FIX] Redhat cmake installs to lib64 by default