github.com/OpenMS/pyopenms-docs issues | Ecosyste.ms: OpenCollective

Allow sphinx testing with other wheels.

poshul opened this pull request about 1 month ago

doc enhancements

cbielow opened this pull request about 1 month ago

Update conf.py version number and copyright

poshul opened this pull request about 2 months ago

Revert "remove old pyqt code"

timosachsenberg opened this pull request 2 months ago

Adding plt.show()

r-sayar opened this pull request 3 months ago

Error when loading pyOpenMS libraries!

LCLazari opened this issue 3 months ago

How to extract isotope EIC when using FeatureFinder () ?

grimace9527 opened this issue 4 months ago

make copyright year dynamic

jcharkow opened this pull request 4 months ago

Tutorial enhancements

cbielow opened this pull request 4 months ago

add code snipped on how to filter by native id

timosachsenberg opened this issue 6 months ago

Prepare for OpenMS 3.2.0 release

mr-c opened this pull request 6 months ago

Question

chulexuexibiedebushihewo opened this issue 7 months ago

Extract specific information from feature_map and matched to ConsensusMap

chulexuexibiedebushihewo opened this issue 7 months ago

Get wrong MassTraceDetection results

xieyying opened this issue 7 months ago

add Tutorial on saving a subset of data (zoomed in 2D area)

timosachsenberg opened this issue 7 months ago

correction charge in mzML file

neel-lab opened this issue 8 months ago

Remove twitter icon

timosachsenberg opened this pull request 8 months ago

Update peptides_proteins.rst

Ayesha-Feroz opened this pull request 11 months ago

Update peptides_proteins.rst

Ayesha-Feroz opened this pull request 11 months ago

Update OpenMS.svg

poshul opened this pull request 11 months ago

openMS input files

saassli21 opened this issue 12 months ago

Bump readthedocs-sphinx-search from 0.3.1 to 0.3.2 in /docs

dependabot[bot] opened this pull request 12 months ago

Bump tj-actions/changed-files from 35 to 41 in /.github/workflows

dependabot[bot] opened this pull request about 1 year ago

Update plotting tutorials

matteopilz opened this pull request about 1 year ago

Spectramerger sprint

KyowonJeong opened this pull request about 1 year ago

removed reference to isotopewavelet

timosachsenberg opened this pull request about 1 year ago

Update spectrum_normalization.rst

Ayesha-Feroz opened this pull request about 1 year ago

Asking for some questions

chulexuexibiedebushihewo opened this issue about 1 year ago

An AttributeError: 'pyopenms.pyopenms_1.ConsensusMap' object has no attribute 'get_df'

chulexuexibiedebushihewo opened this issue about 1 year ago

Revisit and Add spectrum merger tutorial

timosachsenberg opened this issue about 1 year ago

Add spectrum filtering menu item

timosachsenberg opened this issue about 1 year ago

Adduct detection tutorial

axelwalter opened this pull request about 1 year ago

Expand spectrum normalization tutorial

timosachsenberg opened this issue about 1 year ago

Update charge_isotope_deconvolution.rst

poshul opened this pull request about 1 year ago

Add some tutorial on basic OpenSWATH chromatogram algorithms

timosachsenberg opened this issue about 1 year ago

choose binder instance able to run our notebooks

timosachsenberg opened this pull request about 1 year ago

DONT MERGE Master+ipynb

poshul opened this pull request about 1 year ago

Update test-pr.yaml to use conda

poshul opened this pull request about 1 year ago

Use stable pyopenms

poshul opened this pull request about 1 year ago

Change in Isotope Pattern Generator

dlon450 opened this issue over 1 year ago

Update ms_data.rst

poshul opened this pull request over 1 year ago

Test notebooks action does not trigger correctly!!

jpfeuffer opened this issue over 1 year ago

automatically add dev tag based on branch (RTD-only)

jpfeuffer opened this pull request over 1 year ago

add page on logging

jpfeuffer opened this pull request over 1 year ago

Update supported versions of python

radusuciu opened this pull request over 1 year ago

Find a way to automatically update versions at release

jpfeuffer opened this issue over 1 year ago

Documentation about Ionic mobility

PierreSnell opened this issue over 1 year ago

add new-binderIntegration.gif

Arslan-Siraj opened this pull request over 1 year ago

Update installation.rst

Arslan-Siraj opened this pull request over 1 year ago

Update installation.rst for pyopenms

KyowonJeong opened this pull request over 1 year ago

small change to py domain pandoc filter

jpfeuffer opened this pull request over 1 year ago

Convert References to html Links for ipynb

matteopilz opened this pull request over 1 year ago

Update peptides_proteins.rst

Ayesha-Feroz opened this pull request over 1 year ago

Fix MS consumer Code blocks

jpfeuffer opened this issue over 1 year ago

Explicitly import pyOpenMS in the example python codes

JeeH-K opened this pull request over 1 year ago

Wheel/Packages server is returning 503.

PierreSnell opened this issue over 1 year ago

Update scoring_spectra_hyperscore.rst

timosachsenberg opened this pull request over 1 year ago

create pyopenms logo

timosachsenberg opened this issue over 1 year ago

Revert "Update peptides_proteins.rst"

jpfeuffer opened this pull request over 1 year ago

Update peptides_proteins.rst

Ayesha-Feroz opened this pull request over 1 year ago

Update peptides_proteins.rst

timosachsenberg opened this pull request over 1 year ago

Update documentation issue or request template

matteopilz opened this pull request over 1 year ago

Translate dataframes functions to cython

jpfeuffer opened this issue over 1 year ago

Create Vector wrapper for PeptideIdentifications and ProteinIdentifications

jpfeuffer opened this issue over 1 year ago

Update postBuild to use or new nightly pyopenms name scheme

timosachsenberg opened this pull request over 1 year ago

modify icon bar

jpfeuffer opened this pull request over 1 year ago

text for userguide subpage and uncollapse toc

jpfeuffer opened this pull request over 1 year ago

interactive_plots.rst binder doesn't work because it runs out of memory

timosachsenberg opened this issue over 1 year ago

Pydata theme notemplates

jpfeuffer opened this pull request over 1 year ago

Try pandoc 3.x for generating ipynbs

jpfeuffer opened this pull request over 1 year ago

Fix some code blocks

jpfeuffer opened this pull request over 1 year ago

Update requirements.txt

jpfeuffer opened this pull request almost 2 years ago

Update export to pandas dataframes file - solves warnings during notebook generation

axelwalter opened this pull request almost 2 years ago

Memory errors when exporting GNPS files

wkindschuh opened this issue almost 2 years ago

Update wrapping_workflows_new_classes.rst

Ayesha-Feroz opened this pull request almost 2 years ago

Verbosity level

PierreSnell opened this issue almost 2 years ago

Feature: Get variance from different experiements.

PierreSnell opened this issue almost 2 years ago

Potential useful information to review and add to the readthedocs page - from learning unit 11