github.com/OpenMS/pyopenms-docs issues | Ecosyste.ms: OpenCollective

Allow sphinx testing with other wheels.

poshul opened this pull request 18 days ago

doc enhancements

cbielow opened this pull request 20 days ago

Update conf.py version number and copyright

poshul opened this pull request 27 days ago

Revert "remove old pyqt code"

timosachsenberg opened this pull request about 1 month ago

Adding plt.show()

r-sayar opened this pull request 3 months ago

Error when loading pyOpenMS libraries!

LCLazari opened this issue 3 months ago

How to extract isotope EIC when using FeatureFinder () ?

grimace9527 opened this issue 3 months ago

make copyright year dynamic

jcharkow opened this pull request 3 months ago

Tutorial enhancements

cbielow opened this pull request 4 months ago

add code snipped on how to filter by native id

timosachsenberg opened this issue 6 months ago

Prepare for OpenMS 3.2.0 release

mr-c opened this pull request 6 months ago

Question

chulexuexibiedebushihewo opened this issue 6 months ago

Extract specific information from feature_map and matched to ConsensusMap

chulexuexibiedebushihewo opened this issue 6 months ago

Get wrong MassTraceDetection results

xieyying opened this issue 6 months ago

add Tutorial on saving a subset of data (zoomed in 2D area)

timosachsenberg opened this issue 7 months ago

correction charge in mzML file

neel-lab opened this issue 7 months ago

Remove twitter icon

timosachsenberg opened this pull request 8 months ago

Update peptides_proteins.rst

Ayesha-Feroz opened this pull request 10 months ago

Update peptides_proteins.rst

Ayesha-Feroz opened this pull request 10 months ago

Update OpenMS.svg

poshul opened this pull request 10 months ago

openMS input files

saassli21 opened this issue 11 months ago

Bump readthedocs-sphinx-search from 0.3.1 to 0.3.2 in /docs

dependabot[bot] opened this pull request 11 months ago

Bump tj-actions/changed-files from 35 to 41 in /.github/workflows

dependabot[bot] opened this pull request 12 months ago

Update plotting tutorials

matteopilz opened this pull request about 1 year ago

Spectramerger sprint

KyowonJeong opened this pull request about 1 year ago

removed reference to isotopewavelet

timosachsenberg opened this pull request about 1 year ago

Update spectrum_normalization.rst

Ayesha-Feroz opened this pull request about 1 year ago

Asking for some questions

chulexuexibiedebushihewo opened this issue about 1 year ago

An AttributeError: 'pyopenms.pyopenms_1.ConsensusMap' object has no attribute 'get_df'

chulexuexibiedebushihewo opened this issue about 1 year ago

Revisit and Add spectrum merger tutorial

timosachsenberg opened this issue about 1 year ago

Add spectrum filtering menu item

timosachsenberg opened this issue about 1 year ago

Adduct detection tutorial

axelwalter opened this pull request about 1 year ago

Expand spectrum normalization tutorial

timosachsenberg opened this issue about 1 year ago

Update charge_isotope_deconvolution.rst

poshul opened this pull request about 1 year ago

Add some tutorial on basic OpenSWATH chromatogram algorithms

timosachsenberg opened this issue about 1 year ago

choose binder instance able to run our notebooks

timosachsenberg opened this pull request about 1 year ago

DONT MERGE Master+ipynb

poshul opened this pull request about 1 year ago

Update test-pr.yaml to use conda

poshul opened this pull request about 1 year ago

Use stable pyopenms

poshul opened this pull request about 1 year ago

Change in Isotope Pattern Generator

dlon450 opened this issue over 1 year ago

Update ms_data.rst

poshul opened this pull request over 1 year ago

Test notebooks action does not trigger correctly!!

jpfeuffer opened this issue over 1 year ago

automatically add dev tag based on branch (RTD-only)

jpfeuffer opened this pull request over 1 year ago

add page on logging

jpfeuffer opened this pull request over 1 year ago

Update supported versions of python

radusuciu opened this pull request over 1 year ago

Find a way to automatically update versions at release

jpfeuffer opened this issue over 1 year ago

Documentation about Ionic mobility

PierreSnell opened this issue over 1 year ago

add new-binderIntegration.gif

Arslan-Siraj opened this pull request over 1 year ago

Update installation.rst

Arslan-Siraj opened this pull request over 1 year ago

Update installation.rst for pyopenms

KyowonJeong opened this pull request over 1 year ago

small change to py domain pandoc filter

jpfeuffer opened this pull request over 1 year ago

Convert References to html Links for ipynb

matteopilz opened this pull request over 1 year ago

Update peptides_proteins.rst

Ayesha-Feroz opened this pull request over 1 year ago

Fix MS consumer Code blocks

jpfeuffer opened this issue over 1 year ago

Explicitly import pyOpenMS in the example python codes

JeeH-K opened this pull request over 1 year ago

Wheel/Packages server is returning 503.

PierreSnell opened this issue over 1 year ago

Update scoring_spectra_hyperscore.rst

timosachsenberg opened this pull request over 1 year ago

create pyopenms logo

timosachsenberg opened this issue over 1 year ago

Revert "Update peptides_proteins.rst"

jpfeuffer opened this pull request over 1 year ago

Update peptides_proteins.rst

Ayesha-Feroz opened this pull request over 1 year ago

Update peptides_proteins.rst

timosachsenberg opened this pull request over 1 year ago

Update documentation issue or request template

matteopilz opened this pull request over 1 year ago

Translate dataframes functions to cython

jpfeuffer opened this issue over 1 year ago

Create Vector wrapper for PeptideIdentifications and ProteinIdentifications

jpfeuffer opened this issue over 1 year ago

Update postBuild to use or new nightly pyopenms name scheme

timosachsenberg opened this pull request over 1 year ago

modify icon bar

jpfeuffer opened this pull request over 1 year ago

text for userguide subpage and uncollapse toc

jpfeuffer opened this pull request over 1 year ago

interactive_plots.rst binder doesn't work because it runs out of memory

timosachsenberg opened this issue over 1 year ago

Pydata theme notemplates

jpfeuffer opened this pull request over 1 year ago

Try pandoc 3.x for generating ipynbs

jpfeuffer opened this pull request over 1 year ago

Fix some code blocks

jpfeuffer opened this pull request over 1 year ago

Update requirements.txt

jpfeuffer opened this pull request over 1 year ago

Update export to pandas dataframes file - solves warnings during notebook generation

axelwalter opened this pull request over 1 year ago

Memory errors when exporting GNPS files

wkindschuh opened this issue almost 2 years ago

Update wrapping_workflows_new_classes.rst

Ayesha-Feroz opened this pull request almost 2 years ago

Verbosity level

PierreSnell opened this issue almost 2 years ago

Feature: Get variance from different experiements.

PierreSnell opened this issue almost 2 years ago

Potential useful information to review and add to the readthedocs page - from learning unit 11