github.com/OpenMS/pyopenms-docs commits | Ecosyste.ms: OpenCollective

Update algorithms.rst

53266c708820fdbd05ed0059d74db8dc02c8ad52 authored almost 3 years ago by Timo Sachsenberg <[email protected]>

Merge branch 'master' of https://github.com/OpenMS/pyopenms-extra

6b631f1c797e7a96dfabd4accb33c23aaf928108 authored almost 3 years ago by root <[email protected]>

fix some python errors in examples

8cb02104947361ea369f55c738f55e3a72184ef4 authored almost 3 years ago by root <[email protected]>

Doc/installation wheels (#176)

* add wheels installation to doc

* Update installation.rst

* fixes to installation doc

...

6ec861e9d6f4d0db12b66b78a77fc72b0d9f1322 authored almost 3 years ago by JangJang3 <[email protected]>

Merge pull request #175 from kazoni/master

Removed redundant pyopenms imports - Fixes #163

3809fa1e287f835f2e74cf0aebcf8e061d99f21a authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Merge branch 'master' of https://github.com/kazoni/pyopenms-extra

0a1478f0d366add54beac9fcbf22ad1a05e0849e authored almost 3 years ago by kazoni <[email protected]>

sphinx_copybutton package added

a63d59284268423c7ca6dba94a866d3f027486e2 authored almost 3 years ago by rahul799 <[email protected]>

Removed redundant pyopenms import statements - Fixes #163

Reversed one removal and corrected the linting error

32d3ecaad20405e03ef66c45736550bc14b41099 authored almost 3 years ago by kazoni <[email protected]>

Merge branch 'master' of https://github.com/kazoni/pyopenms-extra

968f18b21ea7df9fda2be8cfb13cb8f6e7657c81 authored almost 3 years ago by kazoni <[email protected]>

Reversed one removal and corrected the linting error

317b8e468eeb0f9ec2b405e1a816c502ba6db22f authored almost 3 years ago by kazoni <[email protected]>

Merge branch 'OpenMS:master' into master

550464ba582184e2ed241260375a422256ed2270 authored almost 3 years ago by kazoni <[email protected]>

Removed redundant pyopenms import statements - Fixes #163

6923b983b6761bb39afc95b592b6187602c847cc authored almost 3 years ago by kazoni <[email protected]>

Merge pull request #174 from OpenMS/feature/addCopyButton

Copy button added in code snippets

9eabe7cdbe8a49dfe5ec01004550b49d7386d573 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

sphinx_copybutton package added

d9acb8e4e7a9ff6a5b2ba478146698917c0b919a authored almost 3 years ago by rahul799 <[email protected]>

add pandas to requirements

60de787b970f82fe79a78a715ead10de025bb290 authored almost 3 years ago by axelwalter <[email protected]>

Update id_by_mz.rst

f4ea052cb311072fea8f0875d4da253767ba072f authored almost 3 years ago by axelwalter <[email protected]>

Update id_by_mz.rst

8f67bbe58123757334e8642ddf9605fe551420b3 authored almost 3 years ago by axelwalter <[email protected]>

formatting id_by_mz

c0c3b276761b6d3b62b50da6a20dd0fcb884642b authored almost 3 years ago by axelwalter <[email protected]>

Merge pull request #173 from OpenMS/feature/example-wf-id-by-mz

add example workflow id by mz

bd009b37a55235cdde09a20ae0527248772c2dc5 authored almost 3 years ago by axelwalter <[email protected]>

add example workflow id by mz

61d37ba3c551f5bba2d66d3a94c2ec37154fb16c authored almost 3 years ago by axelwalter <[email protected]>

Update test-pr.yaml

7e1cc6e7a3b6cba3403f8cc2ae15c1e1812aae43 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Update flake8 test.yml

206ec8abc0a743d8b91786536d605def4b2c4555 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Update test-pr.yaml

4037d6d85be1c56e9d5ac1809710bb9358f65999 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Update test-pr.yaml

2d0b11a88346c2fa3285a8c4de2f15cf191632e2 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Update test-pr.yaml

1c3fe30370db18f5cc546d9b95d88d70bd5bcd10 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Update test-pr.yaml

c64a606d7cfc7ccad476ffa6a523c989fef709f5 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Update test-pr.yaml

d75a6268048f77401e7714e0ad0bf640f63b8428 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Update test-pr.yaml

e9639795dbb480cd8b0ccdb63754b9d726002240 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Create PR workflow

6d3ff74dab3077bec35c3442e3970c857022af0c authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Use nightly pyopenms for tests

3fd50539766887faa57242a5c12c22a1d08687d7 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Remove wheel build from workflow

df509fdfa3142efeee367f859beeb8b7ad6c86c8 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Merge pull request #161 from rahul799/master

Adding postbuild script

84b21e627691eec3804e18b16c77c662375bc0d9 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Update postBuild

Co-authored-by: Julianus Pfeuffer <[email protected]>

5a92755341bce13ad4cebab255b8906e9939ac28 authored almost 3 years ago by Rahul Agrawal <[email protected]>

Update postBuild

f9551fc18f6209a6753734770bce99294f940101 authored almost 3 years ago by Rahul Agrawal <[email protected]>

Adding postbuild script

a1572a66b331e917a5881de651ee33e0cc3237c4 authored almost 3 years ago by Rahul Agrawal <[email protected]>

Merge pull request #160 from OpenMS/feature/remove_BB

remove big binder button

42414728aab5db1eaf92eefffe107def99dd17d7 authored almost 3 years ago by Rahul Agrawal <[email protected]>

wrong path to wheelhouse

0a3a0d979a8b5e25e92ff76d84990696220d7a92 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Use py37 during testing to be compatible with the build

2e980a143dd8cfa310150e850e4d4735e0d8b419 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

remove big binder button

2c47ac55fa9a6b3c60de0e71c0babd4c762c3f27 authored almost 3 years ago by Timo Sachsenberg <[email protected]>

Tests: try to install from the local wheelhouse

6dc3ce13c3ac01acdf0eec957a82c6a8723bc9a3 authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

Change badge to "Try online with Binder"

f83bd4f296bc6fa0c30a1f6d1788dbe67b9dc81f authored almost 3 years ago by Julianus Pfeuffer <[email protected]>

wrong path in test-notebooks action

40648a94be0f5e98803007c1e60fde88ab5ab451 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Merge pull request #156 from OpenMS/update/rtdbuild

[Update] Readthedocs build

233efbb82a09226968edcfdeec81ad5db97b4d3e authored about 3 years ago by Julianus Pfeuffer <[email protected]>

better adjustment

0397cc28ad26a834072feeb88f0fd5abb6cbdeba authored about 3 years ago by Julianus Pfeuffer <[email protected]>

adjust anchors for sticky header

eaf69145947dcdf7fcdf15c8af696e1f2aaf96db authored about 3 years ago by Julianus Pfeuffer <[email protected]>

div class changed in current version

da93389419d72965519dd09d7f04414397fe7f9b authored about 3 years ago by Julianus Pfeuffer <[email protected]>

custom css for sticky header

90598807b451ad1455887febfa929b62c8f43b69 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Update datastructures.rst

add code to load experiments used as examples for plotting functions

2f10813e9858e59b785a7f7124f8d4912ce0f79c authored about 3 years ago by axelwalter <[email protected]>

[lint] newline

ce495fafbe788fbdc1962bc717f2d8e073bfc160 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

remove source dir hack

79d6c8655cabd4b8ad0aed590c84f4d841aa7f0f authored about 3 years ago by Julianus Pfeuffer <[email protected]>

fix deprecation of add_stylsheet

012d80028eda40e20a01daeb2dc927e175f3c23a authored about 3 years ago by Julianus Pfeuffer <[email protected]>

oh man.. wrong folder in the .rtd.yml

e8868fd75f703dd4a4dac7e2eadc0ce4e116469a authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Update normalization.rst

739e336fa28c3a4297935c9722a24e7faa7723cd authored about 3 years ago by Timo Sachsenberg <[email protected]>

[FIX] notebook tests

e2926cda8f8658595dc07ae95c403f69d05f211b authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Update normalization.rst

dd60db057b332c1bbeada89e101de1a1d07fcf52 authored about 3 years ago by Timo Sachsenberg <[email protected]>

Update normalization.rst

fd97a574040f1684978c9c2cd0e2c4a6b03a8736 authored about 3 years ago by Timo Sachsenberg <[email protected]>

change sourcedir in conf.py?

3945d3dec5ac262deef62ed851798cdf2814a69f authored about 3 years ago by Julianus Pfeuffer <[email protected]>

edit versions

3e845f08533eecf0b1e7dfd195b467dccb6c5fde authored about 3 years ago by Julianus Pfeuffer <[email protected]>

fix error

ce611dcd1ea9eaed692a0feece8bd2342751e7c5 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

update and pin doc packaging versions

4f98880a61ec35a5c40b2034b73bb7dae4faa3cd authored about 3 years ago by Julianus Pfeuffer <[email protected]>

add rtd config yaml

6d7c47da0db17e6f03d2aad27a79f41791cc14e3 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Edit and add badges for Build, test and sphinx/RTD (#155)

dcde24756fcd2ca223a537dbe96a6080795e30a0 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Update test-notebooks.yml

d8d0d879ae98c4edb749a399e1719aafdd709ebf authored about 3 years ago by Rahul Agrawal <[email protected]>

Update .gitignore

388b9d2d892be73a64b7ca65aa29318cc1cb837f authored about 3 years ago by Rahul Agrawal <[email protected]>

Update test-notebooks.yml

2bf1d3c36e6365cc99a109f95eca8aef00cfc7ab authored about 3 years ago by Rahul Agrawal <[email protected]>

Allow manual trigger of test workflow

c5b518e199c5496e9782c181c9822dc2d584873a authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Update .gitignore

f3c7ffd2e7e87cb6d0906b3748cb88415e9b541a authored about 3 years ago by Rahul Agrawal <[email protected]>

Merge pull request #152 from rahul799/stash-PR1

stash-commit-to-test-workflows

3c42bfd3afe67ff5067b11f9d3168239ed4327d0 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Fixing Dependency Issues

9e6c244b8e961b161fbeded45a809347896321f0 authored about 3 years ago by Rahul Agrawal <[email protected]>

Why does the build not work anymore??

d7d1a79bcb340fb577559a6b5729bcdfd172d907 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

stash-commit-to-test-workflows

29bc8a2ca61acf8977e513cbb93aaad301ddf424 authored about 3 years ago by Rahul Agrawal <[email protected]>

Change Workflow name

891eebb007a4ae833f39310f171cfda146c84ce2 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Removed documentation note (#145)

a904ec94618a7d981e6083777468857f2d6d784f authored about 3 years ago by Vipul Bajaj <[email protected]>

Merge pull request #149 from OpenMS/jpfeuffer-patch-2

Add testing workflow

acc965d1661ff3aa97fb054a79e4d04ac79a9dde authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Add testing workflow

7f69a4526db2f997c0c56bfdd104de2ae528445c authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Merge pull request #148 from OpenMS/jpfeuffer-patch-2

Add badge for build status

df13c4fde76ca8c217b29d2eb9661675062f35d7 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Add badge for build status

c805cbb6d02757f22b0ca45c415a5fc842db31f7 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

[FIX] install pandocfilters package

f9616b0378d6e2f1fcc89bccb23f20cf10dc8ac8 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Merge pull request #123 from OpenMS/feat/pandocconversion

Added pandoc filters for a conversion with plain pandoc

42ad520430f638355a7f9f83588fc2ad3d896719 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

fix linting

d6199da9ba48eb16d78245818d59836a66aae355 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

fix linting

6680668f2a5052e2582425b7e3e2239b5a493e42 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

remove patch (#142)

402b280455ebb7185dbce91da9b61c83303e33fa authored about 3 years ago by Timo Sachsenberg <[email protected]>

update FeatureFinder class names

Updated the FeatureFinder class names according to their implementation in pyOpenMS.

ab5077493a8eb6e5ef27f585848b0451fa9db98c authored about 3 years ago by axelwalter <[email protected]>

Merge branch 'master' into feat/pandocconversion

ace05197f767a43db537f569d7315b455bfdbcd3 authored about 3 years ago by Rahul Agrawal <[email protected]>

workflow [FIX]

9f0a33009b7095c411144b0f41f5deecc47fcf3c authored about 3 years ago by rahul799 <[email protected]>

classes added

f42539b7500d2c4e6a05803697ff2588cde2fa56 authored about 3 years ago by rahul799 <[email protected]>

Merge pull request #131 from OpenMS/fixes

Fixed template and fixed some warnings

15fc95294dd419a69ba9d986c49c82f8f47bdd96 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Fixed template and fixed some warnings

eb95a69275e1bf86f45ee9c574f9946e1ccb22b7 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

move templates

fe28971533336247935c9966158cb42c1481ddd2 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Merge pull request #129 from OpenMS/feat/binderheader

rename folder

731b6b3d0b59e3aadf5ade40ed6c43ed06db9008 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Merge pull request #127 from OpenMS/fix/brackets

remove brackets >>> in code

1780fa371a9a8cc29bc1f4ae3623fa0d20bd9169 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

rename

cf0c22a81ad4567fd49afc05e6c3b31181a28d41 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Merge pull request #128 from OpenMS/feat/binderheader

Tries to add binder to RTD header via sphinx

9cdb8533d82e19345a8294b3c41f42b48386c6fb authored about 3 years ago by Julianus Pfeuffer <[email protected]>

forgot to add folder

b35f8fb627223d45336affd90406391f2a3a516a authored about 3 years ago by Julianus Pfeuffer <[email protected]>

remove brackets

14565f0a9961e3bde008da059d08a155bfbc79c8 authored about 3 years ago by Julianus Pfeuffer <[email protected]>

Update digestion.rst

b998aa5b94777b28c52df0c8ebbfaa54e2f60023 authored about 3 years ago by Timo Sachsenberg <[email protected]>

Update digestion.rst

e894350969bc14729bb05de4b648429caac733c0 authored about 3 years ago by Timo Sachsenberg <[email protected]>

Update digestion.rst

280fd4f8bdef334e7114ee9cac53b4d9932cfca6 authored about 3 years ago by Timo Sachsenberg <[email protected]>

Update digestion.rst

52965c9d566827a28bcdc74c98d976c86a102486 authored about 3 years ago by Timo Sachsenberg <[email protected]>

[DRAFT] Introduction/Background (#119)

* Indroduction/Background draft

* Update introduction.rst

* add figures, todo

* [ADD] M...

34be27e2462f2440ac584cbf8ed71dc4aaadc934 authored about 3 years ago by Oliver Alka <[email protected]>