Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

OpenMS

Make mass spectrometry analysis accessible to anyone
Collective - Host: opensource - https://opencollective.com/openms - Website: https://openms.org - Code: https://github.com/openms

Parameter ms1_isotopes ignored

github.com/OpenMS/OpenMS - cbielow opened this issue 9 months ago
When making pxd file for wrapping class, question about cimport.

github.com/OpenMS/OpenMS - JKVISION1101 opened this issue 9 months ago
Always set working dir in pyopenms tests

github.com/OpenMS/OpenMS - jpfeuffer opened this pull request 10 months ago
After building pyopenms, ctest failed, although importing pyopenms worked well,

github.com/OpenMS/OpenMS - JKVISION1101 opened this issue 10 months ago
deisotopeAndSingleCharge: Removes Highest Intensity Peaks, bug?

github.com/OpenMS/OpenMS - CCranney opened this issue 10 months ago
Bump tj-actions/changed-files from 34.6.1 to 41.0.0 in /.github/workflows

github.com/OpenMS/OpenMS - dependabot[bot] opened this pull request 10 months ago
Bump tj-actions/changed-files from 35 to 41 in /.github/workflows

github.com/OpenMS/pyopenms-docs - dependabot[bot] opened this pull request 10 months ago
[ByGitAction] Updated year number in the header of files

github.com/OpenMS/OpenMS - github-actions[bot] opened this pull request 10 months ago
Bump umetaflow-gui from `050e0ec` to `8440fc3`

github.com/OpenMS/streamlit-deployment - dependabot[bot] opened this pull request 10 months ago
cmake cleanup

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 10 months ago
Is there an elegant way to present the ProteomicsLFQ results?

github.com/OpenMS/OpenMS - liuxiawei opened this issue 10 months ago
Bump umetaflow-gui from `3eb18e2` to `050e0ec`

github.com/OpenMS/streamlit-deployment - dependabot[bot] opened this pull request 10 months ago
Bump umetaflow-gui from `3eb18e2` to `5d5071e`

github.com/OpenMS/streamlit-deployment - dependabot[bot] opened this pull request 10 months ago
fix: remove CWL CI and pregenerated tool description files

github.com/OpenMS/OpenMS - SGSSGene opened this pull request 10 months ago
Allow different sizes of compressed output in zlib unit tests

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 10 months ago
Bump umetaflow-gui from `3eb18e2` to `2aa4dc5`

github.com/OpenMS/streamlit-deployment - dependabot[bot] opened this pull request 10 months ago
Update plotting tutorials

github.com/OpenMS/pyopenms-docs - matteopilz opened this pull request 10 months ago
Display proper exit code when external process crashes

github.com/OpenMS/OpenMS - cbielow opened this pull request 10 months ago
[FEATURE] Concurrent MSGF+ database indexing

github.com/OpenMS/OpenMS - cbielow opened this pull request 10 months ago
7 tests fail when using zlib-ng

github.com/OpenMS/OpenMS - tuliom opened this issue 10 months ago
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - poshul opened this pull request 10 months ago
Bump umetaflow-gui from `6cc740f` to `3eb18e2`

github.com/OpenMS/streamlit-deployment - dependabot[bot] opened this pull request 10 months ago
Bump brew python to 3.12

github.com/OpenMS/OpenMS - poshul opened this pull request 10 months ago
[NOP] renamed "thirdparty" folder to the more common "extern"

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 10 months ago
Bump contrib from `69e61f2` to `5e42765`

github.com/OpenMS/OpenMS - dependabot[bot] opened this pull request 10 months ago
Spectramerger sprint

github.com/OpenMS/pyopenms-docs - KyowonJeong opened this pull request 10 months ago
Delete cmake/Modules/FindHDF5.cmake

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 10 months ago
Generate __str__ and __repr__

github.com/OpenMS/autowrap - timosachsenberg opened this issue 10 months ago
add __repr__

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 10 months ago
Bump src/pyOpenMS/pyopenms-docs from `64016e7` to `bb095b8`

github.com/OpenMS/OpenMS - dependabot[bot] opened this pull request 10 months ago
Aligning Parameters/ New SpectrumGenerator

github.com/OpenMS/OpenMS - Trapho opened this pull request 10 months ago
support tools with multiple headers and cpp files

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 10 months ago
Rewrite generation of _get_item_

github.com/OpenMS/autowrap - jpfeuffer opened this issue 10 months ago
Move CWL outputs to own build subfolder

github.com/OpenMS/OpenMS - jpfeuffer opened this issue 10 months ago
removed reference to isotopewavelet

github.com/OpenMS/pyopenms-docs - timosachsenberg opened this pull request 10 months ago
Removed email signup field in the footer

github.com/OpenMS/OpenMS-website - enetz opened this pull request 10 months ago
Replaced outdated OpenMS logo

github.com/OpenMS/OpenMS-website - enetz opened this pull request 10 months ago
Error report in XTandemAdapter, IDScoreSwitcher, and ProteomicsLFQ

github.com/OpenMS/OpenMS - liuxiawei opened this issue 10 months ago
Added link to FLASHQuant installer files

github.com/OpenMS/OpenMS-website - JeeH-K opened this pull request 11 months ago
add wrap-return-self to change default behavior from returning a copy to a reference

github.com/OpenMS/autowrap - timosachsenberg opened this issue 11 months ago
Add conversion for MSSpectrum & PeptideHit to spectrum_utils MsmsSpectrum

github.com/OpenMS/OpenMS - matteopilz opened this pull request 11 months ago
Update TOPPAS tutorial

github.com/OpenMS/OpenMS - cbielow opened this pull request 11 months ago
Run example TOPPAS workflows with CI

github.com/OpenMS/OpenMS - cbielow opened this issue 11 months ago
our example mzML files could use an update

github.com/OpenMS/OpenMS - cbielow opened this issue 11 months ago
Running MSGF+ in parallel crashes when input DB is new

github.com/OpenMS/OpenMS - cbielow opened this issue 11 months ago
TOPPView: Running TOPP tools fails

github.com/OpenMS/OpenMS - cbielow opened this issue 11 months ago
fix warning in traml handler

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 11 months ago
The incomplete documentation makes beginners feel extremely difficult.

github.com/OpenMS/OpenMS - liuxiawei opened this issue 11 months ago
Make ParamIterator a real iterator

github.com/OpenMS/OpenMS - timosachsenberg opened this issue 11 months ago
fix doc

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 11 months ago
Patch/extend osw output

github.com/OpenMS/OpenMS - jcharkow opened this pull request 11 months ago
[Feature request] Add more low-level MSExperiment multidimensional access functions

github.com/OpenMS/OpenMS - jpfeuffer opened this issue 11 months ago
fix wrong OpenMP max_threads in OpenMSInfo TOPP tool

github.com/OpenMS/OpenMS - cbielow opened this pull request 11 months ago
How do I perform quantitative analysis on PRM data using OpenMS?

github.com/OpenMS/OpenMS - Allen188 opened this issue 11 months ago
Check if this excludes vcpkg from dependabot.yml updates

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 11 months ago
links to wiki go nowhere

github.com/OpenMS/OpenMS-docs - timosachsenberg opened this issue 11 months ago
Bump vcpkg from `64ca152` to `e85cafa`

github.com/OpenMS/OpenMS - dependabot[bot] opened this pull request 11 months ago
Plotting fix - matched peaks highlighting

github.com/OpenMS/OpenMS - matteopilz opened this pull request 11 months ago
Bump vcpkg from `64ca152` to `4cac260`

github.com/OpenMS/OpenMS - dependabot[bot] opened this pull request 11 months ago
Check pyopenms compatibility with Cython < 3.0

github.com/OpenMS/OpenMS - jpfeuffer opened this issue 11 months ago
more robust precursor purity (PR 3 of X)

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 11 months ago
[cleanup] remove outdated RNPxl tool (PR 2 of X)

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 11 months ago
[refactoring] moving files into more appropriate folders (PR 1 of X)

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 11 months ago
[FEATURE] z* and z' ions for ExD (fixed tests)

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 11 months ago
Added port file to use qt from system libraries, fixed bug in LPWrapper cmake files (thanks Julianus)

github.com/OpenMS/OpenMS - timosachsenberg opened this pull request 11 months ago
FindCOIN.cmake use imported targets

github.com/OpenMS/OpenMS - jpfeuffer opened this pull request 11 months ago
SiriusAdapter replaced with SiriusExport and adaptations to AssayGeneratorMetabo

github.com/OpenMS/OpenMS - axelwalter opened this pull request 11 months ago
Refactoring FragmentIndex

github.com/OpenMS/OpenMS - Trapho opened this pull request 11 months ago
[SageAdapter] Feature req: Have a load-only functionality

github.com/OpenMS/OpenMS - jpfeuffer opened this issue 11 months ago
work around Clang bug

github.com/OpenMS/OpenMS - cbielow opened this pull request 11 months ago
always print error when MSGF+ fails

github.com/OpenMS/OpenMS - jpfeuffer opened this pull request 11 months ago
Follow a specification for fragment ion annotations

github.com/OpenMS/OpenMS - jpfeuffer opened this issue 11 months ago
move cwl generation into release action

github.com/OpenMS/OpenMS - timosachsenberg opened this issue 11 months ago
[FEATURE] z* and z' ions for ExD

github.com/OpenMS/OpenMS - jpfeuffer opened this pull request 11 months ago
Fix resampler

github.com/OpenMS/OpenMS - cbielow opened this pull request 11 months ago
[Typestubs] Declare classes that implement iterators as Iterable

github.com/OpenMS/autowrap - jpfeuffer opened this issue 11 months ago
vcpkg might have more requirements than our contrib

github.com/OpenMS/OpenMS - timosachsenberg opened this issue 11 months ago
Bump src/pyOpenMS/pyopenms-docs from `64016e7` to `5fc3503`

github.com/OpenMS/OpenMS - dependabot[bot] opened this pull request 11 months ago
Update spectrum_normalization.rst

github.com/OpenMS/pyopenms-docs - Ayesha-Feroz opened this pull request 11 months ago
OpenSWATH: Differences Between OSW and TSV File Contents

github.com/OpenMS/OpenMS - bruadi opened this issue 11 months ago
[FIX] TOPPView: fix crash when viewing certain Chromatograms

github.com/OpenMS/OpenMS - cbielow opened this pull request 11 months ago
terminate called after throwing an instance of 'std::length_error' what(): vector::_M_range_insert

github.com/OpenMS/OpenMS - AmmarkoV opened this issue 11 months ago
Support different proton abstracted, radicalized, ... c/z ions for ECD

github.com/OpenMS/OpenMS - jpfeuffer opened this issue 11 months ago
Handle coinor from brew as well

github.com/OpenMS/OpenMS - jpfeuffer opened this pull request 11 months ago
how to build pyopenms

github.com/OpenMS/OpenMS - JKVISION1101 opened this issue 11 months ago
Fix SpectrumAnnotator small metadata issue

github.com/OpenMS/OpenMS - jpfeuffer opened this pull request 11 months ago
Fix plotting.py for existing annotations from SpectrumAnnotator

github.com/OpenMS/OpenMS - jpfeuffer opened this pull request 11 months ago
pyopenms 3.1 not available for Silicon macs

github.com/OpenMS/OpenMS - jpfeuffer opened this issue 11 months ago
[FIX] TOPPAS: open files in TOPPView

github.com/OpenMS/OpenMS - cbielow opened this pull request 11 months ago
Asking for some questions

github.com/OpenMS/pyopenms-docs - chulexuexibiedebushihewo opened this issue 11 months ago
An AttributeError: 'pyopenms.pyopenms_1.ConsensusMap' object has no attribute 'get_df'

github.com/OpenMS/pyopenms-docs - chulexuexibiedebushihewo opened this issue 11 months ago
Allow nogil for most types of methods

github.com/OpenMS/autowrap - jpfeuffer opened this pull request 11 months ago
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - poshul opened this pull request 11 months ago
Resampler uses Da instead of PPM

github.com/OpenMS/OpenMS - cbielow opened this issue 11 months ago
Release action

github.com/OpenMS/OpenMS - poshul opened this pull request 11 months ago
Feature/csv comments

github.com/OpenMS/OpenMS - enetz opened this pull request 11 months ago
[NOMERGE] Release3.0.0 winfix

github.com/OpenMS/OpenMS - cbielow opened this pull request 11 months ago
Bump umetaflow-gui from `9e84685` to `6cc740f`

github.com/OpenMS/streamlit-deployment - dependabot[bot] opened this pull request 11 months ago
[fix] add licenses for tool_description_lib

github.com/OpenMS/OpenMS - poshul opened this pull request 11 months ago
NOP

github.com/OpenMS/OpenMS - timosachsenberg opened this issue 11 months ago