Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

OpenMS

Make mass spectrometry analysis accessible to anyone
Collective - Host: opensource - https://opencollective.com/openms - Website: https://openms.org - Code: https://github.com/openms

Merge remote-tracking branch 'upstream/nightly' into feature/FLASHDeconv

github.com/OpenMS/OpenMS-1 - 38c66f5403e103663469d17ccfcf92e89d3cbd6e authored over 2 years ago by JeeH-K <[email protected]>
Merge remote-tracking branch 'upstream/nightly' into feature/FLASHDeconv

github.com/OpenMS/OpenMS - 38c66f5403e103663469d17ccfcf92e89d3cbd6e authored over 2 years ago by JeeH-K <[email protected]>
Merge remote-tracking branch 'upstream/develop' into delete-dups

github.com/OpenMS/OpenMS - 03fb606803db8a29ef0aa9fa32535dbc263b583f authored over 2 years ago by Tapasweni Pathak <[email protected]>
Merge remote-tracking branch 'upstream/develop' into delete-dups

github.com/OpenMS/OpenMS-1 - 03fb606803db8a29ef0aa9fa32535dbc263b583f authored over 2 years ago by Tapasweni Pathak <[email protected]>
update changelog

github.com/OpenMS/OpenMS-1 - fb509babb544916254ba534329286c1d430dceaf authored over 2 years ago by Tapasweni Pathak <[email protected]>
update changelog

github.com/OpenMS/OpenMS - fb509babb544916254ba534329286c1d430dceaf authored over 2 years ago by Tapasweni Pathak <[email protected]>
Delete: duplicate pages in openms rtd and doxgen

Ref: https://github.com/OpenMS/OpenMS-docs/issues/4#issuecomment-1125150286.

github.com/OpenMS/OpenMS - 22141b3490deb89eb85948a960c527b8d93d1ccc authored over 2 years ago by Tapasweni Pathak <[email protected]>
Delete: duplicate pages in openms rtd and doxgen

Ref: https://github.com/OpenMS/OpenMS-docs/issues/4#issuecomment-1125150286.

github.com/OpenMS/OpenMS-1 - 22141b3490deb89eb85948a960c527b8d93d1ccc authored over 2 years ago by Tapasweni Pathak <[email protected]>
Publishing Site OpenMS/openms.de at 12c22ab1a386d8987c5fa4b14ec16209c5a20e1d on Wed Jun 8 15:11:02 UTC 2022

github.com/OpenMS/openms.github.io - 2d9d2170416817b70cc829f67bc333c63416d730 authored over 2 years ago by rahul799 <[email protected]>
tag changed

github.com/OpenMS/OpenMS-website - 12c22ab1a386d8987c5fa4b14ec16209c5a20e1d authored over 2 years ago by rahul799 <[email protected]>
images-added

github.com/OpenMS/OpenMS-website - bb822413bd56bef966eb396ff70f325d0e1cdc8e authored over 2 years ago by rahul799 <[email protected]>
Publishing Site OpenMS/openms.de at 5c4b6644dc9f1baed872ead7acb64031c0e9aeb1 on Wed Jun 8 14:30:47 UTC 2022

github.com/OpenMS/openms.github.io - 8c63ce62adde8ff07fe7533f891d5880f62ce022 authored over 2 years ago by rahul799 <[email protected]>
Enhancememnt

github.com/OpenMS/OpenMS-website - 5c4b6644dc9f1baed872ead7acb64031c0e9aeb1 authored over 2 years ago by rahul799 <[email protected]>
Publishing Site OpenMS/openms.de at cc009519f98b072d5ef64e1b1deede76c69e7cb4 on Wed Jun 8 14:13:02 UTC 2022

github.com/OpenMS/openms.github.io - 95359aa7d82bf04ef0ecad2517c04deb9d301fda authored over 2 years ago by rahul799 <[email protected]>
applications page added

github.com/OpenMS/OpenMS-website - cc009519f98b072d5ef64e1b1deede76c69e7cb4 authored over 2 years ago by rahul799 <[email protected]>
fix: grammatical errors docs/guides/user-guides/user-quickstart-guide.md

Co-authored-by: Eugen Netz <[email protected]>

github.com/OpenMS/OpenMS-docs - c690e51b77c5f38dc93ccb83c31b03609eac8077 authored over 2 years ago by Tapasweni Pathak <[email protected]>
fix: grammatical errors docs/installations/installation-on-gnu-linux.md

Co-authored-by: Eugen Netz <[email protected]>

github.com/OpenMS/OpenMS-docs - 3bbb4b447e4d1754b1fae05034a2a29dd191ddf1 authored over 2 years ago by Tapasweni Pathak <[email protected]>
fix: grammatical errors docs/installations/installation-on-gnu-linux.md

Co-authored-by: Eugen Netz <[email protected]>

github.com/OpenMS/OpenMS-docs - 30f7541f4350f32d1157cae3169e5db122dfda83 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Address review comments by @enetz and @jpfeuffer (#83)

Ref https://github.com/OpenMS/OpenMS-docs/pull/65.

github.com/OpenMS/OpenMS-docs - a6c592bcf71d5e6c2b43d1d62fa7fedbdf712f7a authored over 2 years ago by Tapasweni Pathak <[email protected]>
Address review comments by @timosachsenberg (#78)

Ref: https://github.com/OpenMS/OpenMS-docs/pull/65.

github.com/OpenMS/OpenMS-docs - f3a6dc8fe8c7e2e6b9f44b5ab121d6bcaf82ed86 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Address review comments by @greengypsy (#77)

Ref: https://github.com/OpenMS/OpenMS-docs/pull/65.

github.com/OpenMS/OpenMS-docs - 5493c1eadc19ed1fec4b22c21b9085bdf633bca2 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Address review comments by @erik-whiting (#82)

Ref https://github.com/OpenMS/OpenMS-docs/pull/65.

github.com/OpenMS/OpenMS-docs - 6ea8049f85f248d124e4dde10257943234a627fc authored over 2 years ago by Tapasweni Pathak <[email protected]>
made changed to documentation according to feedback

github.com/OpenMS/OpenMS-1 - a36baf23b48e8bb81e06f9d7e90f6b6a92c299b6 authored over 2 years ago by greengypsy <[email protected]>
made changed to documentation according to feedback

github.com/OpenMS/OpenMS - a36baf23b48e8bb81e06f9d7e90f6b6a92c299b6 authored over 2 years ago by greengypsy <[email protected]>
Merged develop and added metavalue num_of_datapoints.

github.com/OpenMS/OpenMS - f9f4581bd9c9e64fcd2842288a6354a313996041 authored over 2 years ago by Virginia Rossow <[email protected]>
Merged develop and added metavalue num_of_datapoints.

github.com/OpenMS/OpenMS-1 - f9f4581bd9c9e64fcd2842288a6354a313996041 authored over 2 years ago by Virginia Rossow <[email protected]>
Merge branch 'develop' into maxquant-output

github.com/OpenMS/OpenMS-1 - 72209fc950fef1c32a22502d03193d69ab5d5292 authored over 2 years ago by Virginia Rossow <[email protected]>
Merge branch 'develop' into maxquant-output

github.com/OpenMS/OpenMS - 72209fc950fef1c32a22502d03193d69ab5d5292 authored over 2 years ago by Virginia Rossow <[email protected]>
Added the compatible version of MSFragger into the MSFraggerAdapter documentation. (#6154)

github.com/OpenMS/OpenMS - a686a995efc5d2f38519666039d856566a571654 authored over 2 years ago by tillenglert <[email protected]>
Added the compatible version of MSFragger into the MSFraggerAdapter documentation. (#6154)

github.com/OpenMS/OpenMS-1 - a686a995efc5d2f38519666039d856566a571654 authored over 2 years ago by tillenglert <[email protected]>
Feature/GNPSexport_split_files (#6152)

* Separate class for GNPSQuantificationFile and adding GNPSMetaValueFile

* add new files

*...

github.com/OpenMS/OpenMS-1 - 1acb92a7d2ded2f5fc706045be36b6bf87ca1f5b authored over 2 years ago by Timo Sachsenberg <[email protected]>
Feature/GNPSexport_split_files (#6152)

* Separate class for GNPSQuantificationFile and adding GNPSMetaValueFile

* add new files

*...

github.com/OpenMS/OpenMS - 1acb92a7d2ded2f5fc706045be36b6bf87ca1f5b authored over 2 years ago by Timo Sachsenberg <[email protected]>
fixed signed and unsigned int comparison (#6150)

Co-authored-by: Timo Sachsenberg <[email protected]>

github.com/OpenMS/OpenMS - 988bfef13dd389a6b973bc70e0b4c35b70d6c320 authored over 2 years ago by KyowonJeong <[email protected]>
fixed signed and unsigned int comparison (#6150)

Co-authored-by: Timo Sachsenberg <[email protected]>

github.com/OpenMS/OpenMS-1 - 988bfef13dd389a6b973bc70e0b4c35b70d6c320 authored over 2 years ago by KyowonJeong <[email protected]>
Create faq.rst (#282)

* Create faq.rst

* Update faq.rst

Change headings formattings to the one discussed.

* U...

github.com/OpenMS/pyopenms-docs - 5e59a178aa72c63ceefba17d1ab10184f1224d19 authored over 2 years ago by greengypsy <[email protected]>
[PARAM, FEATURE] FileConverter, disable zlib compression flag (#6151)

github.com/OpenMS/OpenMS-1 - db0229516839ba59004032f0b9e04ab553bb81a6 authored over 2 years ago by Eugen Netz <[email protected]>
[PARAM, FEATURE] FileConverter, disable zlib compression flag (#6151)

github.com/OpenMS/OpenMS - db0229516839ba59004032f0b9e04ab553bb81a6 authored over 2 years ago by Eugen Netz <[email protected]>
fix unneded pragma warning in cpp (#6148)

github.com/OpenMS/OpenMS - ac113412ef7524d51f648e696f81fecceab3de98 authored over 2 years ago by Timo Sachsenberg <[email protected]>
fix unneded pragma warning in cpp (#6148)

github.com/OpenMS/OpenMS-1 - ac113412ef7524d51f648e696f81fecceab3de98 authored over 2 years ago by Timo Sachsenberg <[email protected]>
added pull request checklist link

github.com/OpenMS/OpenMS-1 - de5d92d770adcd488b2ccb8392d09bc1f61cf064 authored over 2 years ago by greengypsy <[email protected]>
added pull request checklist link

github.com/OpenMS/OpenMS - de5d92d770adcd488b2ccb8392d09bc1f61cf064 authored over 2 years ago by greengypsy <[email protected]>
Publishing Site OpenMS/openms.de at 7c13084f64e1ce7d5999fe8a547193d0b55c2138 on Thu Jun 2 06:49:57 UTC 2022

github.com/OpenMS/openms.github.io - 0bb2525c75758cb9b470b6fb02eb86eec0ad109d authored over 2 years ago by rahul799 <[email protected]>
Logo Updated

github.com/OpenMS/OpenMS-website - 7c13084f64e1ce7d5999fe8a547193d0b55c2138 authored over 2 years ago by rahul799 <[email protected]>
Publishing Site OpenMS/openms.de at f1f3a4f21716989158358fecb0f8228adc7015cd on Wed Jun 1 11:42:03 UTC 2022

github.com/OpenMS/openms.github.io - da72154904a358ed58c139f5fce00aca73050212 authored over 2 years ago by rahul799 <[email protected]>
key-features added

github.com/OpenMS/OpenMS-website - f1f3a4f21716989158358fecb0f8228adc7015cd authored over 2 years ago by rahul799 <[email protected]>
modified developer-faq to include questions not included in contributor-faq.md

github.com/OpenMS/OpenMS - 40c0a14276cf1b574960dae58c60f37701fbe76a authored over 2 years ago by greengypsy <[email protected]>
modified developer-faq to include questions not included in contributor-faq.md

github.com/OpenMS/OpenMS-1 - 40c0a14276cf1b574960dae58c60f37701fbe76a authored over 2 years ago by greengypsy <[email protected]>
Publishing Site OpenMS/openms.de at 9a51c17af68f4c133fa660a512edb9520223f9f7 on Tue May 31 09:19:11 UTC 2022

github.com/OpenMS/openms.github.io - c6a1838142780411a707d462f1e0e8406a82b1ae authored over 2 years ago by rahul799 <[email protected]>
git submodule updated

github.com/OpenMS/OpenMS-website - 9a51c17af68f4c133fa660a512edb9520223f9f7 authored over 2 years ago by rahul799 <[email protected]>
Publishing Site OpenMS/openms.de at 4c862764c21f3022b66971958070a39ccc82c577 on Tue May 31 09:12:54 UTC 2022

github.com/OpenMS/openms.github.io - 5185865caca7f1ddd4c302592948ad2976c0e623 authored over 2 years ago by rahul799 <[email protected]>
Privacy Policy added

github.com/OpenMS/OpenMS-website - 4c862764c21f3022b66971958070a39ccc82c577 authored over 2 years ago by rahul799 <[email protected]>
fixup: use :term: in .rst!

github.com/OpenMS/OpenMS-docs - d4bbf8ecd240ec58d1cc067f3aa2b0286565e2c1 authored over 2 years ago by Tapasweni Pathak <[email protected]>
fixes: improvements: touchup and cleanup (#64)

github.com/OpenMS/OpenMS-docs - 5097262ddaffdd3f8f62f0922920eb1f886e1651 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Merge pull request #6136 from zhuchcn/uclacds-develop

Add support of "no cleavage" for XTandemAdapter & CometAdapter

github.com/OpenMS/OpenMS-1 - 1f903c020948ae0ddfea70b21440047b6e328c23 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6136 from zhuchcn/uclacds-develop

Add support of "no cleavage" for XTandemAdapter & CometAdapter

github.com/OpenMS/OpenMS - 1f903c020948ae0ddfea70b21440047b6e328c23 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #156 from erik-whiting/add-lint-automation

Add lint automation

github.com/OpenMS/autowrap - 050e63292b857a97b3cea7991d82bdedaaf7e4ee authored over 2 years ago by Julianus Pfeuffer <[email protected]>
fixes

github.com/OpenMS/OpenMS-1 - 8952f5f98e7f710aa19a008d79495a9e2766dce4 authored over 2 years ago by bielow <[email protected]>
fixes

github.com/OpenMS/OpenMS - 8952f5f98e7f710aa19a008d79495a9e2766dce4 authored over 2 years ago by bielow <[email protected]>
Merge branch 'develop' of https://github.com/OpenMS/OpenMS into refact_toppview

# Conflicts:
# src/openms/source/CONCEPT/CommonEnums.cpp
# src/openms_gui/source/VISUAL/ANNOTATI...

github.com/OpenMS/OpenMS - 0f637941b4db69b8f22e4c0dbf9d107c63c8f538 authored over 2 years ago by bielow <[email protected]>
Merge branch 'develop' of https://github.com/OpenMS/OpenMS into refact_toppview

# Conflicts:
# src/openms/source/CONCEPT/CommonEnums.cpp
# src/openms_gui/source/VISUAL/ANNOTATI...

github.com/OpenMS/OpenMS-1 - 0f637941b4db69b8f22e4c0dbf9d107c63c8f538 authored over 2 years ago by bielow <[email protected]>
progress...

github.com/OpenMS/OpenMS-1 - 66c4132380f901ad57954d8932770939ee426f5e authored over 2 years ago by bielow <[email protected]>
progress...

github.com/OpenMS/OpenMS - 66c4132380f901ad57954d8932770939ee426f5e authored over 2 years ago by bielow <[email protected]>
Add linter to CI

github.com/OpenMS/autowrap - 99e6a42c26ae3376130588422f087ea72d9a3bae authored over 2 years ago by erik-whiting <[email protected]>
fix: rendering in subsection sidebar

github.com/OpenMS/OpenMS-docs - 007e1738a814c2bda72ef99ad918c2629967f47d authored over 2 years ago by Tapasweni Pathak <[email protected]>
fix: cleanup: dup

github.com/OpenMS/OpenMS-docs - 1940391ef34a2e3d87075bec0ac3ebbbe3843b3e authored over 2 years ago by Tapasweni Pathak <[email protected]>
Production ready[2]: Touchup and cleanup (#58)

* fix: follow Sentence case for h2 or less

* fix: glossary terms in introduction page

* ad...

github.com/OpenMS/OpenMS-docs - b7019d473792ce5a470f64e2c8b97c68de535ff6 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Spell out RC

github.com/OpenMS/OpenMS-docs - f58c6d639f8a3471bfe8c4f31fd39affef2accdd authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Production ready[1]: Touchup and cleanup (#51)

* Add: build-openms-from-source in sidebar menu

* let's make everything work on staging-openm...

github.com/OpenMS/OpenMS-docs - 13229e7f14afe1d0d0c09ab10edafdf26fbf6df4 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Add: Glossary :tada: (#49)

github.com/OpenMS/OpenMS-docs - 4af256d8c3b6979489d7cd9d0cdc2599f291af60 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Add wiki and a few more docs (#48)

* Add: Adding your own tool to the TOPP suite

* Add: writing and shipping external code using...

github.com/OpenMS/OpenMS-docs - e105635176b028fc00cab217a0f2a316da0b2606 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Create README.md

github.com/OpenMS/openms.github.io - 123e664a542586980288ca9d7030abaa8f4eae8e authored over 2 years ago by Rahul Agrawal <[email protected]>
Publishing Site OpenMS/openms.de at fde136f16fbcab078dfd69fc307567ae816e73b8 on Sun May 29 10:10:19 UTC 2022

github.com/OpenMS/openms.github.io - 21ca49ab06c7c73343cde31d1e5dd260187f8d64 authored over 2 years ago by rahul799 <[email protected]>
disabled languages removed

github.com/OpenMS/OpenMS-website - fde136f16fbcab078dfd69fc307567ae816e73b8 authored over 2 years ago by rahul799 <[email protected]>
Merge branch 'main' of https://github.com/OpenMS/openms.de

github.com/OpenMS/OpenMS-website - 3e4bda12c4a5ac8da16ec4d7f95cb9fc8def82ee authored over 2 years ago by rahul799 <[email protected]>
Disabled languages removed

github.com/OpenMS/OpenMS-website - 457a78a9ea15fc6b000c172080e085700619ed5d authored over 2 years ago by rahul799 <[email protected]>
Teams page added

github.com/OpenMS/OpenMS-website - b333714344adc8ae7041c1b975c8c2001681b1d8 authored over 2 years ago by rahul799 <[email protected]>
Publication page added

github.com/OpenMS/OpenMS-website - 5cf5455ff0835734407a2fadf4483a8c47124140 authored over 2 years ago by rahul799 <[email protected]>
added discussed doxygen files

github.com/OpenMS/OpenMS-1 - 572a9a2a218b67a407e401707474562947cb6e56 authored over 2 years ago by greengypsy <[email protected]>
added discussed doxygen files

github.com/OpenMS/OpenMS - 572a9a2a218b67a407e401707474562947cb6e56 authored over 2 years ago by greengypsy <[email protected]>
Publishing Site OpenMS/openms.de at c8f5b411dd0390ab7aff4c63d7e381296aafc2f3 on Sat May 28 12:03:44 UTC 2022

github.com/OpenMS/openms.github.io - 49a2c5f34191d0a7f3ef4ca52870ad15d8c417c9 authored over 2 years ago by poshul <[email protected]>
Update LICENSE

Added missing acknowledgement to conform with Numpy.org's BSD license.

github.com/OpenMS/OpenMS-website - c8f5b411dd0390ab7aff4c63d7e381296aafc2f3 authored over 2 years ago by Samuel Wein <[email protected]>
Add conda installation instructions and a few reorderings (#38)

Fixes https://github.com/OpenMS/OpenMS-docs/issues/15.
Fixes https://github.com/OpenMS/OpenMS-d...

github.com/OpenMS/OpenMS-docs - 0c3261f52002cc34775586c4d998ed7b16326dff authored over 2 years ago by Tapasweni Pathak <[email protected]>
Add lexers to project (#47)

* modified conf.py and requirements.txt to include pygments code

* added lexers to code in se...

github.com/OpenMS/OpenMS-docs - 9153f1bec4a1ea41bb891d9168616878b43ff0e6 authored over 2 years ago by greengypsy <[email protected]>
Msms works + test added

github.com/OpenMS/OpenMS - abdc0a9d2658a5d4eac7d3393397b3d3737aceb3 authored over 2 years ago by Virginia Rossow <[email protected]>
Msms works + test added

github.com/OpenMS/OpenMS-1 - abdc0a9d2658a5d4eac7d3393397b3d3737aceb3 authored over 2 years ago by Virginia Rossow <[email protected]>
Merge branch 'OpenMS:develop' into develop

github.com/OpenMS/OpenMS-1 - 969cf912d2adb7a8c0bc3430ddc85a85a0cb0a35 authored over 2 years ago by greengypsy <[email protected]>
Merge branch 'OpenMS:develop' into develop

github.com/OpenMS/OpenMS - 969cf912d2adb7a8c0bc3430ddc85a85a0cb0a35 authored over 2 years ago by greengypsy <[email protected]>
More docs (#40)

* created About.rst

* linked Developer FAQ to external website

* linked Developer FAQ to e...

github.com/OpenMS/OpenMS-docs - df40058a0b1b4932cac4bc6814e76dca5da0d3d1 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Add introduction of a few concepts (#39)

* Add introduction of a few concepts

Fixes https://github.com/OpenMS/OpenMS-docs/issues/14.
...

github.com/OpenMS/OpenMS-docs - 5bc8d23987781007599c5c82077df20150e4350e authored over 2 years ago by Tapasweni Pathak <[email protected]>
Merge pull request #41 from tapaswenipathak/add-downloads

Add downloads page

github.com/OpenMS/OpenMS-docs - 2963baf32db1fcbb74d69080eae31d0f23ee9410 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Add downloads page

github.com/OpenMS/OpenMS-docs - 6ed29fc5b77e96c906885ce5959f2b15200d973a authored over 2 years ago by Tapasweni Pathak <[email protected]>
Publishing Site OpenMS/openms.de at 26361219cc596e5f6c46e8d99b2f261d48576164 on Thu May 26 07:51:39 UTC 2022

github.com/OpenMS/openms.github.io - fc40c0794361e0db6924b05adba93733dfbf9b35 authored over 2 years ago by rahul799 <[email protected]>
enhancements

github.com/OpenMS/OpenMS-website - 26361219cc596e5f6c46e8d99b2f261d48576164 authored over 2 years ago by rahul799 <[email protected]>
Apply changes from black linter

github.com/OpenMS/autowrap - b670b34a5d25e32c19f30f9c39d7a5f6cb6c2770 authored over 2 years ago by erik-whiting <[email protected]>
Merge pull request #6141 from cbielow/api_extensions

some preps for upcoming GUI PR

github.com/OpenMS/OpenMS-1 - e0e8d0ebdd89b5f43cda84b5a6548d5af6772a9e authored over 2 years ago by Chris Bielow <[email protected]>
Merge pull request #6141 from cbielow/api_extensions

some preps for upcoming GUI PR

github.com/OpenMS/OpenMS - e0e8d0ebdd89b5f43cda84b5a6548d5af6772a9e authored over 2 years ago by Chris Bielow <[email protected]>
MQEvidence Test now working with fasta

github.com/OpenMS/OpenMS - 9c865feb468d5ed941f854a971fca676421ea2ee authored over 2 years ago by lennykovac <[email protected]>
MQEvidence Test now working with fasta

github.com/OpenMS/OpenMS-1 - 9c865feb468d5ed941f854a971fca676421ea2ee authored over 2 years ago by lennykovac <[email protected]>
add tests

github.com/OpenMS/OpenMS-1 - 6e9dda69331a78b2555281bb2774899c4dad02d9 authored over 2 years ago by bielow <[email protected]>
add tests

github.com/OpenMS/OpenMS - 6e9dda69331a78b2555281bb2774899c4dad02d9 authored over 2 years ago by bielow <[email protected]>