Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

OpenMS

Make mass spectrometry analysis accessible to anyone
Collective - Host: opensource - https://opencollective.com/openms - Website: https://openms.org - Code: https://github.com/openms

Adding menu bar for training

github.com/OpenMS/OpenMS-website - 8d3026df204316ffc10410315f567b2e49d5bd91 authored over 2 years ago by rahul799 <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum in PeakGroup.cpp. Changing PeakGroup so scoring is included inside as private functions. 70% done.

github.com/OpenMS/OpenMS-1 - 730151e86d9a6451e7b43ffa03610b9e282ae7f3 authored over 2 years ago by kyowonjeong <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum in PeakGroup.cpp. Changing PeakGroup so scoring is included inside as private functions. 70% done.

github.com/OpenMS/OpenMS - 730151e86d9a6451e7b43ffa03610b9e282ae7f3 authored over 2 years ago by kyowonjeong <[email protected]>
minimal support for IM Frame data in 2D

github.com/OpenMS/OpenMS - bf132c6d28eafb2826d1fff5a07d41020ad211d0 authored over 2 years ago by bielow <[email protected]>
minimal support for IM Frame data in 2D

github.com/OpenMS/OpenMS-1 - bf132c6d28eafb2826d1fff5a07d41020ad211d0 authored over 2 years ago by bielow <[email protected]>
Merge pull request #6196 from OpenMS/Delete-uncrustify-config-and-uncrustify_branch.sh-file

Delete uncrustify config and uncrustify_branch.sh file

github.com/OpenMS/OpenMS-1 - 23e67e187650b0b656d6343cf7c977da738d1b40 authored over 2 years ago by Samuel Wein <[email protected]>
Merge pull request #6196 from OpenMS/Delete-uncrustify-config-and-uncrustify_branch.sh-file

Delete uncrustify config and uncrustify_branch.sh file

github.com/OpenMS/OpenMS - 23e67e187650b0b656d6343cf7c977da738d1b40 authored over 2 years ago by Samuel Wein <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum ins PeakGroup.cpp. Changing PeakGroup so scoring is included inside as private functions. 50% done.

github.com/OpenMS/OpenMS - ff855adcf17af05aa45e10e2df80e128616b80fd authored over 2 years ago by kyowonjeong <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum ins PeakGroup.cpp. Changing PeakGroup so scoring is included inside as private functions. 50% done.

github.com/OpenMS/OpenMS-1 - ff855adcf17af05aa45e10e2df80e128616b80fd authored over 2 years ago by kyowonjeong <[email protected]>
Add CMake test explorer to gitpod

github.com/OpenMS/OpenMS-1 - 4643431f4026f02622b35d1154cd5c6e6ad617eb authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Add CMake test explorer to gitpod

github.com/OpenMS/OpenMS - 4643431f4026f02622b35d1154cd5c6e6ad617eb authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum ins PeakGroup.cpp. Changing PeakGroup so scoring is included inside as private functions.

github.com/OpenMS/OpenMS - 35c188033b1dfabe175c086c785c08710d4469b4 authored over 2 years ago by kyowonjeong <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum ins PeakGroup.cpp. Changing PeakGroup so scoring is included inside as private functions.

github.com/OpenMS/OpenMS-1 - 35c188033b1dfabe175c086c785c08710d4469b4 authored over 2 years ago by kyowonjeong <[email protected]>
Add support for shift operators

github.com/OpenMS/autowrap - 9064efe1ccc8aeed1816e22bdb8410fb2bbde8e2 authored over 2 years ago by Erik Whiting <[email protected]>
Add support for modulus op and iop

github.com/OpenMS/autowrap - 6193b3624135cd1b3f3e9b96e9b3b8e03867e898 authored over 2 years ago by Erik Whiting <[email protected]>
Publishing Site OpenMS/openms.de at 84f59ea7f380a38d72bdd764f5f649818ac8f494 on Sun Jun 26 16:25:11 UTC 2022

github.com/OpenMS/openms.github.io - f7f881276c38bd0f848a5d124413f88a98c750d8 authored over 2 years ago by rahul799 <[email protected]>
Publishing Site OpenMS/openms.de at a1f1562f3dcaa6a15db5b7adefc87d18adfcbb6d on Sun Jun 26 16:24:30 UTC 2022

github.com/OpenMS/openms.github.io - b29891befabeb02f82ec1ec0a747225338206446 authored over 2 years ago by rahul799 <[email protected]>
Fixing mentions of unused tools

github.com/OpenMS/OpenMS-website - a1f1562f3dcaa6a15db5b7adefc87d18adfcbb6d authored over 2 years ago by rahul799 <[email protected]>
Publishing Site OpenMS/openms.de at 4c0f3c1e5bb728b1cbfed0f08e18d2adfe8ff807 on Sun Jun 26 16:13:08 UTC 2022

github.com/OpenMS/openms.github.io - 322a9eb3ebb4f9731a234a301b30fbe2e1952869 authored over 2 years ago by rahul799 <[email protected]>
fix, wip: debugging spectral library matching

github.com/OpenMS/OpenMS-1 - 13a201d4407a07a7c1698b7c9cd1d0da27908160 authored over 2 years ago by dmccloskey <[email protected]>
fix, wip: debugging spectral library matching

github.com/OpenMS/OpenMS - 13a201d4407a07a7c1698b7c9cd1d0da27908160 authored over 2 years ago by dmccloskey <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum ins PeakGroup.cpp. This function collects all peaks from each mass before scoring. Fine tuning will follow.

github.com/OpenMS/OpenMS - da5512d3bac82582953fcbb956e4d879019b22bd authored over 2 years ago by kyowonjeong <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum ins PeakGroup.cpp. This function collects all peaks from each mass before scoring. Fine tuning will follow.

github.com/OpenMS/OpenMS-1 - da5512d3bac82582953fcbb956e4d879019b22bd authored over 2 years ago by kyowonjeong <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum ins PeakGroup.cpp. This function collects all peaks from each mass before scoring. Fine tuning will follow.

github.com/OpenMS/OpenMS-1 - d2224d1a5ff6cc2810f35f4b6462e40c1e184560 authored over 2 years ago by kyowonjeong <[email protected]>
Big performance boost by introducing recurteAllPeaksInSepctrum ins PeakGroup.cpp. This function collects all peaks from each mass before scoring. Fine tuning will follow.

github.com/OpenMS/OpenMS - d2224d1a5ff6cc2810f35f4b6462e40c1e184560 authored over 2 years ago by kyowonjeong <[email protected]>
fix, wip: refining matchSpectra and library generation routines

github.com/OpenMS/OpenMS - d12d83330c3f4f7677fddfc93bb9bc92aa6858dd authored over 2 years ago by dmccloskey <[email protected]>
fix, wip: refining matchSpectra and library generation routines

github.com/OpenMS/OpenMS-1 - d12d83330c3f4f7677fddfc93bb9bc92aa6858dd authored over 2 years ago by dmccloskey <[email protected]>
Further corrected documents placed within 120 chars, Ref 73. (#110)

* more introduction.md edits

* introduction.md complete

* Fixed Additional Resources, Doc ...

github.com/OpenMS/OpenMS-docs - 958a2ae15a3ae23cc1b351242f5449373419cb69 authored over 2 years ago by Julian PG Riches <[email protected]>
fix: cleaned up AnnotateSpectra to reduce reudandant code

github.com/OpenMS/OpenMS-1 - f9733c175d99937a393fd99bfb8dda4fdae956d5 authored over 2 years ago by dmccloskey <[email protected]>
fix: cleaned up AnnotateSpectra to reduce reudandant code

github.com/OpenMS/OpenMS - f9733c175d99937a393fd99bfb8dda4fdae956d5 authored over 2 years ago by dmccloskey <[email protected]>
+ allow showing a single spectrum in 2D view (fix RT margins)

+ update axis when switching intensity mode

github.com/OpenMS/OpenMS - 8a15772cfc9329b57705d66e0b65ceaceb20cae5 authored over 2 years ago by bielow <[email protected]>
+ allow showing a single spectrum in 2D view (fix RT margins)

+ update axis when switching intensity mode

github.com/OpenMS/OpenMS-1 - 8a15772cfc9329b57705d66e0b65ceaceb20cae5 authored over 2 years ago by bielow <[email protected]>
support Chroms in 1D natively

lots of fixes and simplifications

github.com/OpenMS/OpenMS-1 - d2621c3392e848d2331a206428778a62407c355e authored over 2 years ago by bielow <[email protected]>
support Chroms in 1D natively

lots of fixes and simplifications

github.com/OpenMS/OpenMS - d2621c3392e848d2331a206428778a62407c355e authored over 2 years ago by bielow <[email protected]>
fix: updated ConstructTransitionList transition creation logic to account for duplicate names and RTs

github.com/OpenMS/OpenMS - 18e4ab03d2c757debdeccb9131131a06089b06e5 authored over 2 years ago by dmccloskey <[email protected]>
fix: updated ConstructTransitionList transition creation logic to account for duplicate names and RTs

github.com/OpenMS/OpenMS-1 - 18e4ab03d2c757debdeccb9131131a06089b06e5 authored over 2 years ago by dmccloskey <[email protected]>
Merge pull request #6173 from OpenMS/fix/psmpepfdr_plfq

[Fix] PSM and Pep FDR in PLFQ

github.com/OpenMS/OpenMS-1 - 394b1492e732625f44b4036f8a873a22258d15cc authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6173 from OpenMS/fix/psmpepfdr_plfq

[Fix] PSM and Pep FDR in PLFQ

github.com/OpenMS/OpenMS - 394b1492e732625f44b4036f8a873a22258d15cc authored over 2 years ago by Julianus Pfeuffer <[email protected]>
removed uncrustify_branch.sh

github.com/OpenMS/OpenMS - 3ea5b86134d102bf2475f084476ebd286ef6d079 authored over 2 years ago by matteopilz <[email protected]>
removed uncrustify_branch.sh

github.com/OpenMS/OpenMS-1 - 3ea5b86134d102bf2475f084476ebd286ef6d079 authored over 2 years ago by matteopilz <[email protected]>
Delete uncrustify.cfg

github.com/OpenMS/OpenMS-1 - d9b392e1efd91de8fcfd879b398a15358fe9af1a authored over 2 years ago by Matteo Pilz <[email protected]>
Delete uncrustify.cfg

github.com/OpenMS/OpenMS - d9b392e1efd91de8fcfd879b398a15358fe9af1a authored over 2 years ago by Matteo Pilz <[email protected]>
Bug fixes in negative MS mode

github.com/OpenMS/OpenMS - 844920b868457c285c3399b7e771c19129d06fbf authored over 2 years ago by kyowonjeong <[email protected]>
Bug fixes in negative MS mode

github.com/OpenMS/OpenMS-1 - 844920b868457c285c3399b7e771c19129d06fbf authored over 2 years ago by kyowonjeong <[email protected]>
fix: bugs from merge

github.com/OpenMS/OpenMS-1 - d1b04f5cf1f9fb4e2386d0a62d3bd1491c38c2a6 authored over 2 years ago by dmccloskey <[email protected]>
fix: bugs from merge

github.com/OpenMS/OpenMS - d1b04f5cf1f9fb4e2386d0a62d3bd1491c38c2a6 authored over 2 years ago by dmccloskey <[email protected]>
Merge pull request #6167 from tapaswenipathak/delete-dups

Delete: duplicate pages in openms rtd and doxgen

github.com/OpenMS/OpenMS - 9905029a1d9b5e8e65c1387f322abd0f835e76c6 authored over 2 years ago by Samuel Wein <[email protected]>
Merge pull request #6167 from tapaswenipathak/delete-dups

Delete: duplicate pages in openms rtd and doxgen

github.com/OpenMS/OpenMS-1 - 9905029a1d9b5e8e65c1387f322abd0f835e76c6 authored over 2 years ago by Samuel Wein <[email protected]>
Merge branch 'delete-dups' of github.com:tapaswenipathak/OpenMS into delete-dups

github.com/OpenMS/OpenMS-1 - 75e150f6dc6ad532b214357be068dd0d0abf0f55 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Merge branch 'delete-dups' of github.com:tapaswenipathak/OpenMS into delete-dups

github.com/OpenMS/OpenMS - 75e150f6dc6ad532b214357be068dd0d0abf0f55 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Add OpenMS tut pages on RTD

github.com/OpenMS/OpenMS - 7a704cc3b25282ab3b2acc101b86d028a2f05d25 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Add OpenMS tut pages on RTD

github.com/OpenMS/OpenMS-1 - 7a704cc3b25282ab3b2acc101b86d028a2f05d25 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Add TOPPAS Tutorial RTD link

github.com/OpenMS/OpenMS-1 - 602a9f50f56c551b09ac3d6a3a01a28ca5d5d9d0 authored over 2 years ago by Tapasweni Pathak <[email protected]>
Add TOPPAS Tutorial RTD link

github.com/OpenMS/OpenMS - 602a9f50f56c551b09ac3d6a3a01a28ca5d5d9d0 authored over 2 years ago by Tapasweni Pathak <[email protected]>
merge develop

github.com/OpenMS/OpenMS - efb805ca3e7b5bc567558c3cbe179ff25c6b63f9 authored over 2 years ago by dmccloskey <[email protected]>
merge develop

github.com/OpenMS/OpenMS-1 - efb805ca3e7b5bc567558c3cbe179ff25c6b63f9 authored over 2 years ago by dmccloskey <[email protected]>
Merge branch 'develop' into delete-dups

github.com/OpenMS/OpenMS-1 - 588f514dc34f16189b3a662fda32ca02132393fc authored over 2 years ago by Tapasweni Pathak <[email protected]>
Merge branch 'develop' into delete-dups

github.com/OpenMS/OpenMS - 588f514dc34f16189b3a662fda32ca02132393fc authored over 2 years ago by Tapasweni Pathak <[email protected]>
Publishing Site OpenMS/openms.de at b533e475d28700b0e2fbaffb910a5b34360a47b5 on Wed Jun 22 17:37:16 UTC 2022

github.com/OpenMS/openms.github.io - 73cd9a24ffdbe14c954111557d9dbdfb2043f820 authored over 2 years ago by rahul799 <[email protected]>
Publishing Site OpenMS/openms.de at 652d39018fca0e79ca059a4f0c0e2cee0875b053 on Wed Jun 22 17:31:40 UTC 2022

github.com/OpenMS/openms.github.io - 3376d3efec4f39ba25a2ffb9a2a753f28b8c4870 authored over 2 years ago by rahul799 <[email protected]>
all-files-added

github.com/OpenMS/OpenMS-website - 652d39018fca0e79ca059a4f0c0e2cee0875b053 authored over 2 years ago by rahul799 <[email protected]>
Merge branch 'develop' into fix/psmpepfdr_plfq

github.com/OpenMS/OpenMS-1 - 0add0f4b09a1220d6abc56e88bba135db8092a93 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Merge branch 'develop' into fix/psmpepfdr_plfq

github.com/OpenMS/OpenMS - 0add0f4b09a1220d6abc56e88bba135db8092a93 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6193 from bertrandboudaud/fix/pyOpenMS_storeSpectraTraML_not_found

Fixed pyOpenMS build: storeSpectraTraML has been renamed constructTra…

github.com/OpenMS/OpenMS - 7fcfaf66fee9678713faf759b8b2dbda39610585 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6193 from bertrandboudaud/fix/pyOpenMS_storeSpectraTraML_not_found

Fixed pyOpenMS build: storeSpectraTraML has been renamed constructTra…

github.com/OpenMS/OpenMS-1 - 7fcfaf66fee9678713faf759b8b2dbda39610585 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Fixed pxd for extractSpectra

github.com/OpenMS/OpenMS-1 - 8d132e137c4a8814f6340b21295ccb042fa6dab8 authored over 2 years ago by bertrandboudaud <[email protected]>
Fixed pxd for extractSpectra

github.com/OpenMS/OpenMS - 8d132e137c4a8814f6340b21295ccb042fa6dab8 authored over 2 years ago by bertrandboudaud <[email protected]>
Publishing Site OpenMS/openms.de at 204567ab49488e70668a78d8d0d1710eb21989f3 on Wed Jun 22 09:54:32 UTC 2022

github.com/OpenMS/openms.github.io - f937d8b238e7b61d31befc0f70ce5969305355d4 authored over 2 years ago by rahul799 <[email protected]>
removing unwanted files

github.com/OpenMS/OpenMS-website - 204567ab49488e70668a78d8d0d1710eb21989f3 authored over 2 years ago by rahul799 <[email protected]>
Fixed pyOpenMS build: storeSpectraTraML has been renamed constructTransitionsList

github.com/OpenMS/OpenMS-1 - fd4c8bef86cfc4e21f3622e23a6bba6d03a9e617 authored over 2 years ago by bertrandboudaud <[email protected]>
Fixed pyOpenMS build: storeSpectraTraML has been renamed constructTransitionsList

github.com/OpenMS/OpenMS - fd4c8bef86cfc4e21f3622e23a6bba6d03a9e617 authored over 2 years ago by bertrandboudaud <[email protected]>
Lines within 120 characters for several documents. Ref 73. (#108)

* more introduction.md edits

* introduction.md complete

* Fixed Additional Resources, Doc ...

github.com/OpenMS/OpenMS-docs - b36e02355cdc7f9063e2355cd48150f7e81db03b authored over 2 years ago by Julian PG Riches <[email protected]>
Merge branch 'develop' into fix/psmpepfdr_plfq

github.com/OpenMS/OpenMS-1 - 659e9c93f1a919b538e05fd701094a151db38b14 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Merge branch 'develop' into fix/psmpepfdr_plfq

github.com/OpenMS/OpenMS - 659e9c93f1a919b538e05fd701094a151db38b14 authored over 2 years ago by Julianus Pfeuffer <[email protected]>
[FIX] some style and pyopenms

github.com/OpenMS/OpenMS - 7295a715ec305f754e3c3c3edc2c62a79ef600a9 authored over 2 years ago by jpfeuffer <[email protected]>
[FIX] some style and pyopenms

github.com/OpenMS/OpenMS-1 - 7295a715ec305f754e3c3c3edc2c62a79ef600a9 authored over 2 years ago by jpfeuffer <[email protected]>
[FIX] Last fixes for pepFDR in plfq

github.com/OpenMS/OpenMS-1 - 6aaaebff8030edf436741a93c8e446149b95a741 authored over 2 years ago by jpfeuffer <[email protected]>
[FIX] Last fixes for pepFDR in plfq

github.com/OpenMS/OpenMS - 6aaaebff8030edf436741a93c8e446149b95a741 authored over 2 years ago by jpfeuffer <[email protected]>
Update README.md

github.com/OpenMS/.github - 6c3691fb78b0568f54b7bea66bc508991bf436af authored over 2 years ago by Julianus Pfeuffer <[email protected]>
Publishing Site OpenMS/openms.de at 9fa373aa28947442db89c7f43b7d1072379abb2f on Tue Jun 21 13:35:40 UTC 2022

github.com/OpenMS/openms.github.io - da708abf61a9a2b6095553d4c2a78b4cef9addec authored over 2 years ago by rahul799 <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-website - 9fa373aa28947442db89c7f43b7d1072379abb2f authored over 2 years ago by Rahul Agrawal <[email protected]>
Publishing Site OpenMS/openms.de at cec378e6d83e19c5ce7de4be7b1cdeaae7473cfd on Tue Jun 21 13:34:16 UTC 2022

github.com/OpenMS/openms.github.io - cbe77a3dc09bb52e188e9052279d0ecbc6fedb08 authored over 2 years ago by rahul799 <[email protected]>
Publishing Site OpenMS/openms.de at 984f2a2ad33be12283110a4f0e98f4ba2707e408 on Tue Jun 21 13:32:53 UTC 2022

github.com/OpenMS/openms.github.io - 5c456d7745c5c4241c6d8dbffc21052cdcfa0877 authored over 2 years ago by rahul799 <[email protected]>
Merge branch 'main' of https://github.com/OpenMS/openms.de

github.com/OpenMS/OpenMS-website - 62f892331de935236891d8e36af37c7c253834dc authored over 2 years ago by rahul799 <[email protected]>
example-workflow-added

github.com/OpenMS/OpenMS-website - 941ab68f7d1d01be68b153a324937051f4a23069 authored over 2 years ago by rahul799 <[email protected]>
Merge pull request #20 from eseiler/patch-8

Update seqan_versions.txt

github.com/OpenMS/usage_plots - 23d87fa96bf16f45919d571a8aa4bdeb1ec0d2f4 authored over 2 years ago by Svenja Mehringer <[email protected]>
Update seqan_versions.txt

github.com/OpenMS/usage_plots - 288582ab54906d5c663bd873bee5f79c6f00965d authored over 2 years ago by Enrico Seiler <[email protected]>
Publishing Site OpenMS/openms.de at 3f4685c7cd05692ea8754c52f930db1333e82342 on Mon Jun 20 09:15:56 UTC 2022

github.com/OpenMS/openms.github.io - af82ced915fb4b8c5520527534ce54bbd7de5c8c authored over 2 years ago by rahul799 <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-website - 3f4685c7cd05692ea8754c52f930db1333e82342 authored over 2 years ago by Rahul Agrawal <[email protected]>
Publishing Site OpenMS/openms.de at 150afa575d8efd1fd79de787ea9cae6ef845b06a on Mon Jun 20 08:31:03 UTC 2022

github.com/OpenMS/openms.github.io - 72bc51aa118b7a276d6f1b9ed1cd42c9494c262e authored over 2 years ago by rahul799 <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-website - 150afa575d8efd1fd79de787ea9cae6ef845b06a authored over 2 years ago by Rahul Agrawal <[email protected]>
Publishing Site OpenMS/openms.de at 005610b6378cad9507a5ca8c03b939ad200d91f0 on Mon Jun 20 08:04:28 UTC 2022

github.com/OpenMS/openms.github.io - e47c298ad2ead096606472b814a7d29aa1db3ea8 authored over 2 years ago by rahul799 <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-website - 005610b6378cad9507a5ca8c03b939ad200d91f0 authored over 2 years ago by Rahul Agrawal <[email protected]>
Publishing Site OpenMS/openms.de at 05ddb851eef41b2b458fb1ef6998bc1d4f70366b on Mon Jun 20 07:58:57 UTC 2022

github.com/OpenMS/openms.github.io - f17a5ac0e6ebe19e4e12b2cb7e02e83262d0849a authored over 2 years ago by rahul799 <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-website - 05ddb851eef41b2b458fb1ef6998bc1d4f70366b authored over 2 years ago by Rahul Agrawal <[email protected]>