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An open API service for software projects hosted on Open Collective.

OpenMS

Make mass spectrometry analysis accessible to anyone
Collective - Host: opensource - https://opencollective.com/openms - Website: https://openms.org - Code: https://github.com/openms

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Co-authored-by: Chris Bielow <[email protected]>

github.com/OpenMS/OpenMS - 598afeb9ee8b6f603938e9a13cfe8476dded7f7f authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Apply suggestions from code review

Co-authored-by: Chris Bielow <[email protected]>

github.com/OpenMS/OpenMS-1 - 598afeb9ee8b6f603938e9a13cfe8476dded7f7f authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update doc/doxygen/install/install-win.doxygen

Co-authored-by: Chris Bielow <[email protected]>

github.com/OpenMS/OpenMS-1 - c0b080081d456dd6b7771704d1d4cb5b0f74f10b authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update doc/doxygen/install/install-win.doxygen

Co-authored-by: Chris Bielow <[email protected]>

github.com/OpenMS/OpenMS - c0b080081d456dd6b7771704d1d4cb5b0f74f10b authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge branch 'develop' into jpfeuffer-patch-4

github.com/OpenMS/OpenMS - b82e09ab7e2ae60ae2fa46d4924ce2c7f4d3dfa0 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge branch 'develop' into jpfeuffer-patch-4

github.com/OpenMS/OpenMS-1 - b82e09ab7e2ae60ae2fa46d4924ce2c7f4d3dfa0 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
[NOP, COMMENT, TEST, DOC] minor fixes

Fix whitespaces and tabs
Add documentation for findSwathMapsPasef function
Fix OpenSwath Test 23...

github.com/OpenMS/OpenMS-1 - 0294cab23b173fc76b0db60dca6721fe570982a8 authored about 2 years ago by Joshua <[email protected]>
[NOP, COMMENT, TEST, DOC] minor fixes

Fix whitespaces and tabs
Add documentation for findSwathMapsPasef function
Fix OpenSwath Test 23...

github.com/OpenMS/OpenMS - 0294cab23b173fc76b0db60dca6721fe570982a8 authored about 2 years ago by Joshua <[email protected]>
Merge pull request #6328 from poshul/feature_onemodule_py

Fix tooling to compile pyopenms as a single module

github.com/OpenMS/OpenMS - 3c4f8ba175e3d70cac7fdcaaa02642b5b2b443e9 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6328 from poshul/feature_onemodule_py

Fix tooling to compile pyopenms as a single module

github.com/OpenMS/OpenMS-1 - 3c4f8ba175e3d70cac7fdcaaa02642b5b2b443e9 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
fix app

github.com/OpenMS/pyopenms-docs - 03919192e47ec430529bb92cff8038bcf1a3a35a authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update CMakeLists.txt

github.com/OpenMS/OpenMS - fda3eff629c264a3eaa75e5f88801268538820e2 authored about 2 years ago by Samuel Wein <[email protected]>
Update CMakeLists.txt

github.com/OpenMS/OpenMS-1 - fda3eff629c264a3eaa75e5f88801268538820e2 authored about 2 years ago by Samuel Wein <[email protected]>
Merge remote-tracking branch 'upstream/develop' into feature/FLASHDeconv

github.com/OpenMS/OpenMS-1 - 748041ece468e65cb6aaca75d032570113f50db3 authored about 2 years ago by JeeH-K <[email protected]>
Merge remote-tracking branch 'upstream/develop' into feature/FLASHDeconv

github.com/OpenMS/OpenMS - 748041ece468e65cb6aaca75d032570113f50db3 authored about 2 years ago by JeeH-K <[email protected]>
fix text for typing info

github.com/OpenMS/OpenMS - 8aebf21e9cbde5ab3deb730671c3b7d344a1f72d authored about 2 years ago by Samuel Wein <[email protected]>
fix text for typing info

github.com/OpenMS/OpenMS-1 - 8aebf21e9cbde5ab3deb730671c3b7d344a1f72d authored about 2 years ago by Samuel Wein <[email protected]>
Merge branch 'develop' into feature/OswImCalibOutput

github.com/OpenMS/OpenMS-1 - 30ea02ab431fdb926cdedcabe91b70e99a1a5f55 authored about 2 years ago by Joshua Charkow <[email protected]>
Merge branch 'develop' into feature/OswImCalibOutput

github.com/OpenMS/OpenMS - 30ea02ab431fdb926cdedcabe91b70e99a1a5f55 authored about 2 years ago by Joshua Charkow <[email protected]>
Merge branch 'develop' into feature_onemodule_py

github.com/OpenMS/OpenMS - 1692ce9f7f8a9e9d22049e1b8a759b25f50b436e authored about 2 years ago by Samuel Wein <[email protected]>
Merge branch 'develop' into feature_onemodule_py

github.com/OpenMS/OpenMS-1 - 1692ce9f7f8a9e9d22049e1b8a759b25f50b436e authored about 2 years ago by Samuel Wein <[email protected]>
reverted suffix addition in CMakeLists, fixed create_cpp_extension to handle single module compilation, fixed CMakeLists to map imports properly

github.com/OpenMS/OpenMS-1 - d1732a4c3296878d9473d78963f443c2203e7958 authored about 2 years ago by Samuel Wein <[email protected]>
reverted suffix addition in CMakeLists, fixed create_cpp_extension to handle single module compilation, fixed CMakeLists to map imports properly

github.com/OpenMS/OpenMS - d1732a4c3296878d9473d78963f443c2203e7958 authored about 2 years ago by Samuel Wein <[email protected]>
Build version 06092022

github.com/OpenMS/OpenMS - 2ce9ccddb5d83c469a5aa26633a4ae1f5ef17eae authored about 2 years ago by kyowonjeong <[email protected]>
Build version 06092022

github.com/OpenMS/OpenMS-1 - 2ce9ccddb5d83c469a5aa26633a4ae1f5ef17eae authored about 2 years ago by kyowonjeong <[email protected]>
handling case where we have only a single pyopenms module

github.com/OpenMS/OpenMS-1 - 40f165f8118ead065f53dbc87595f60942020fda authored about 2 years ago by Samuel Wein <[email protected]>
handling case where we have only a single pyopenms module

github.com/OpenMS/OpenMS - 40f165f8118ead065f53dbc87595f60942020fda authored about 2 years ago by Samuel Wein <[email protected]>
[DOC][COMMENT] minor doc fixes to new changes

github.com/OpenMS/OpenMS - 081cb47b8c3b488e5a34d6f139d11c7328aabc2b authored about 2 years ago by Joshua <[email protected]>
[DOC][COMMENT] minor doc fixes to new changes

github.com/OpenMS/OpenMS-1 - 081cb47b8c3b488e5a34d6f139d11c7328aabc2b authored about 2 years ago by Joshua <[email protected]>
Better Installation instructions (#169)

* Major fix of installation instructions

* Fix

* use new tab syntax

* fix links

* fi...

github.com/OpenMS/OpenMS-docs - b03e3c8822d7801dea8c238115237156c9b6c213 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-1 - 784375c0ea77ba1728f14755bb777a35f1cff2be authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update README.md

github.com/OpenMS/OpenMS - 784375c0ea77ba1728f14755bb777a35f1cff2be authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update README.md

github.com/OpenMS/OpenMS - 1a8a3d4ba2af9ea91a7148c6722c67ff452fee1e authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-1 - 1a8a3d4ba2af9ea91a7148c6722c67ff452fee1e authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-1 - 86dc96c7f8c775267e4af84c9f7c6cdee8916e66 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update README.md

github.com/OpenMS/OpenMS - 86dc96c7f8c775267e4af84c9f7c6cdee8916e66 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update README.md

github.com/OpenMS/OpenMS - 3f8a01d69dc2812d3deb08ac790e5c427c9aa595 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-1 - 3f8a01d69dc2812d3deb08ac790e5c427c9aa595 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update installation-on-macos.md (#171)

* Update installation-on-macos.md

* restored images

* Update installation-on-macos.md

github.com/OpenMS/OpenMS-docs - 656c5cbb1cffb8bad9515b63fc4b8dd322a2934d authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge remote-tracking branch 'upstream/develop' into feature/FLASHDeconv

github.com/OpenMS/OpenMS-1 - 62abdb4ff6836c20cf50cf4cd9e6795c24312122 authored about 2 years ago by JeeH-K <[email protected]>
Merge remote-tracking branch 'upstream/develop' into feature/FLASHDeconv

github.com/OpenMS/OpenMS - 62abdb4ff6836c20cf50cf4cd9e6795c24312122 authored about 2 years ago by JeeH-K <[email protected]>
Build version 01092022

github.com/OpenMS/OpenMS - d616afb70a117a1e629a8cd3b0a0162403eeac71 authored about 2 years ago by kyowonjeong <[email protected]>
Build version 01092022

github.com/OpenMS/OpenMS-1 - d616afb70a117a1e629a8cd3b0a0162403eeac71 authored about 2 years ago by kyowonjeong <[email protected]>
Modify background (#170)

* modified content of background and added one image of peak map

* added link to openms commu...

github.com/OpenMS/OpenMS-docs - 96fa2d8fd708d716c6812a117f04f00f00d8ecbe authored about 2 years ago by greengypsy <[email protected]>
first running version. and updated tests

github.com/OpenMS/OpenMS-1 - ebe2a1f2c120b78e9a4ba59da7ce4a55132a9e45 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
first running version. and updated tests

github.com/OpenMS/OpenMS - ebe2a1f2c120b78e9a4ba59da7ce4a55132a9e45 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update introduction.rst

Many minor edits. I shortened the text here and there and made the concepts more consistent espe...

github.com/OpenMS/pyopenms-docs - 170440291f4f3d0685ec5470d878a7748289397c authored about 2 years ago by Tjeerd Dijkstra <[email protected]>
Update NASequence.cpp

Clarify comment

github.com/OpenMS/OpenMS - 5f43372c929d053ec2c6cf09f84a852c6a0332dc authored about 2 years ago by Samuel Wein <[email protected]>
Update NASequence.cpp

Clarify comment

github.com/OpenMS/OpenMS-1 - 5f43372c929d053ec2c6cf09f84a852c6a0332dc authored about 2 years ago by Samuel Wein <[email protected]>
Merge pull request #6319 from axelwalter/feature/sirius-login

[Feature] Sirius user account login

github.com/OpenMS/OpenMS-1 - 3cbb868b31dacda665f0a5a037c1ab34f2fa9d50 authored about 2 years ago by axelwalter <[email protected]>
Merge pull request #6319 from axelwalter/feature/sirius-login

[Feature] Sirius user account login

github.com/OpenMS/OpenMS - 3cbb868b31dacda665f0a5a037c1ab34f2fa9d50 authored about 2 years ago by axelwalter <[email protected]>
Change number of cards per row for smaller screens. (#168)

github.com/OpenMS/OpenMS-docs - bd70e0b860a2bca72414932911d74da293138181 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
more cleanups and fixes. implement coverage and mod collection for consensusmaps

github.com/OpenMS/OpenMS - ac07ea08d93e588045202bd05af7bff2ddf2cd30 authored about 2 years ago by jpfeuffer <[email protected]>
more cleanups and fixes. implement coverage and mod collection for consensusmaps

github.com/OpenMS/OpenMS-1 - ac07ea08d93e588045202bd05af7bff2ddf2cd30 authored about 2 years ago by jpfeuffer <[email protected]>
fix one table design

github.com/OpenMS/OpenMS-1 - a30bd100a359a76535bfe26513caf879718f8872 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
fix one table design

github.com/OpenMS/OpenMS - a30bd100a359a76535bfe26513caf879718f8872 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
FIX invalid file names.. (#166)

* FIX invalid file names..

* wow.. fix everything

github.com/OpenMS/OpenMS-docs - 59915fefc130eaa0c263e67c1108cc18ad8b6586 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
check login info in SiriusAdapter

github.com/OpenMS/OpenMS - c93d3156737915dc2ee025129543e1ed5ddb643d authored about 2 years ago by axelwalter <[email protected]>
check login info in SiriusAdapter

github.com/OpenMS/OpenMS-1 - c93d3156737915dc2ee025129543e1ed5ddb643d authored about 2 years ago by axelwalter <[email protected]>
Add logos and cards as initially discussed (#163)

github.com/OpenMS/OpenMS-docs - d40a17f3e4c3bc0cc3555ec2c29913a579d78638 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
replaced abibuilder.informatik with abibuilder.cs (#165)

github.com/OpenMS/OpenMS-docs - deb59ab22d42766210b92293a2856ccce3790e61 authored about 2 years ago by greengypsy <[email protected]>
wrap sirius login function

github.com/OpenMS/OpenMS-1 - a71618afac61b325824d4ad8d952c6a2f3e3a0cd authored about 2 years ago by axelwalter <[email protected]>
wrap sirius login function

github.com/OpenMS/OpenMS - a71618afac61b325824d4ad8d952c6a2f3e3a0cd authored about 2 years ago by axelwalter <[email protected]>
implement login for SiriusAdapter

github.com/OpenMS/OpenMS - 1452e744959b93c95edc981f7a2ebab237ac14ba authored about 2 years ago by axelwalter <[email protected]>
implement login for SiriusAdapter

github.com/OpenMS/OpenMS-1 - 1452e744959b93c95edc981f7a2ebab237ac14ba authored about 2 years ago by axelwalter <[email protected]>
modified entry points title and content and modified image (#162)

* modified entry points title and content and modified image

* added entry points page to index

github.com/OpenMS/OpenMS-docs - 576196bc029a1bb07b575aa75f70175c57b89d94 authored about 2 years ago by greengypsy <[email protected]>
Merge branch 'develop' into jpfeuffer-patch-4

github.com/OpenMS/OpenMS-1 - e45e1dbfc1e6e4674a9cdd48f34331e3bbac4d33 authored about 2 years ago by Timo Sachsenberg <[email protected]>
Merge branch 'develop' into jpfeuffer-patch-4

github.com/OpenMS/OpenMS - e45e1dbfc1e6e4674a9cdd48f34331e3bbac4d33 authored about 2 years ago by Timo Sachsenberg <[email protected]>
Update .gitpod.Dockerfile

github.com/OpenMS/OpenMS - 908c8d935556c2ebcea41e75265e3e479b5a0045 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update .gitpod.Dockerfile

github.com/OpenMS/OpenMS-1 - 908c8d935556c2ebcea41e75265e3e479b5a0045 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update deploy-manylinux-docker.yml

github.com/OpenMS/contrib - 0866c5edc8b85dbe6a7a894df88ec575479993ae authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update deploy-manylinux-docker.yml

github.com/OpenMS/contrib - a0b28cb0612bdaf8d2d7a1c2028f71d0bd9c110c authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Update deploydocker.yml

github.com/OpenMS/contrib - 4b05c9aa148f87b1838901836442bb8510da6dd9 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6318 from OpenMS/updateContrib

[Update] submodule with new archive URLs

github.com/OpenMS/OpenMS-1 - bf3db80f461c2b6f8c7ed339d9b5367c4b30b1af authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6318 from OpenMS/updateContrib

[Update] submodule with new archive URLs

github.com/OpenMS/OpenMS - bf3db80f461c2b6f8c7ed339d9b5367c4b30b1af authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Install QtSQL sqlite plugin

github.com/OpenMS/dockerfiles - 1d1bc66193d69566d2cae62616791e32e45d077c authored about 2 years ago by Julianus Pfeuffer <[email protected]>
[Update] submodule with new archive URLs

github.com/OpenMS/OpenMS-1 - 30d554f2aa112dd91341fdd1840c864302a0af5e authored about 2 years ago by jpfeuffer <[email protected]>
[Update] submodule with new archive URLs

github.com/OpenMS/OpenMS - 30d554f2aa112dd91341fdd1840c864302a0af5e authored about 2 years ago by jpfeuffer <[email protected]>
[Update] Archive URL after infrastructure move

github.com/OpenMS/contrib - f90ad2686ec88cd85974630d8b9c7fe62c0f41c3 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6311 from OpenMS/jpfeuffer-patch-1

pyopenms class doc link

github.com/OpenMS/OpenMS - 2e5747ce1d56a6d66642448ac75e2996ac0f1920 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6311 from OpenMS/jpfeuffer-patch-1

pyopenms class doc link

github.com/OpenMS/OpenMS-1 - 2e5747ce1d56a6d66642448ac75e2996ac0f1920 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Further fixes and cleans

github.com/OpenMS/OpenMS-1 - f6a87fb83370c2fdcab7d1f91a831d44c50fcad0 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Further fixes and cleans

github.com/OpenMS/OpenMS - f6a87fb83370c2fdcab7d1f91a831d44c50fcad0 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
fix missing electron masses

github.com/OpenMS/OpenMS - 562b018de2f6e657278dfbfe1e99e2f3bcd5c3f7 authored about 2 years ago by Samuel Wein <[email protected]>
fix missing electron masses

github.com/OpenMS/OpenMS-1 - 562b018de2f6e657278dfbfe1e99e2f3bcd5c3f7 authored about 2 years ago by Samuel Wein <[email protected]>
do not `cd..` for evergreen headers

github.com/OpenMS/OpenMS-1 - c84e0e75f788eb2785a89db788502941168e7a03 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
do not `cd..` for evergreen headers

github.com/OpenMS/OpenMS - c84e0e75f788eb2785a89db788502941168e7a03 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Move install location of thirdparty headers into openms include dir

fixes #6314
fixes #6315

github.com/OpenMS/OpenMS - 562fd7e1b123cbf95f19482e1cf5e4de058ab833 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Move install location of thirdparty headers into openms include dir

fixes #6314
fixes #6315

github.com/OpenMS/OpenMS-1 - 562fd7e1b123cbf95f19482e1cf5e4de058ab833 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge tutorials (#160)

* move metabolomics tutorial inside openms user tutorial

* move metabolomics tutorial inside ...

github.com/OpenMS/OpenMS-docs - f70c324527cb53475eddfce1eb2d4bf369e4c34d authored about 2 years ago by greengypsy <[email protected]>
actually update URL to new server

github.com/OpenMS/build-scripts - 93e4b170f06b2310d30bd52d14fb681b84d3c994 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
fix lint

github.com/OpenMS/OpenMS-1 - bf468c314b01205e042d092c0f90e1268fc4c6e1 authored about 2 years ago by GitHub Linter <[email protected]>
fix lint

github.com/OpenMS/OpenMS - bf468c314b01205e042d092c0f90e1268fc4c6e1 authored about 2 years ago by GitHub Linter <[email protected]>
[REFACTOR] update archive URLs

github.com/OpenMS/build-scripts - f72fc34745ed984936ac50e1bfa4edcb9d0f49f3 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge branch 'develop' into NASE_charge_fix

github.com/OpenMS/OpenMS-1 - 2cc575f1b908bec1a8243eb7ca6f8a7ef869693d authored about 2 years ago by Samuel Wein <[email protected]>
Merge branch 'develop' into NASE_charge_fix

github.com/OpenMS/OpenMS - 2cc575f1b908bec1a8243eb7ca6f8a7ef869693d authored about 2 years ago by Samuel Wein <[email protected]>
Merge pull request #6308 from OpenMS/fix/abibuilderURLs

[FIX] update abibuilder urls

github.com/OpenMS/OpenMS - 6fe57740e67feefccb64500d6cafcf7387e062a4 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
Merge pull request #6308 from OpenMS/fix/abibuilderURLs

[FIX] update abibuilder urls

github.com/OpenMS/OpenMS-1 - 6fe57740e67feefccb64500d6cafcf7387e062a4 authored about 2 years ago by Julianus Pfeuffer <[email protected]>
[nop] Added documentation for some NASequence functions that needed it.

github.com/OpenMS/OpenMS-1 - 3b919f9e7fa4dc467c426825244be2bb810cc57a authored about 2 years ago by Samuel Wein <[email protected]>
[nop] Added documentation for some NASequence functions that needed it.

github.com/OpenMS/OpenMS - 3b919f9e7fa4dc467c426825244be2bb810cc57a authored about 2 years ago by Samuel Wein <[email protected]>