OpenMS commits | Ecosyste.ms: OpenCollective

Masstrace isotope bug fixed

github.com/OpenMS/OpenMS-1 - 3dc8d62105cb6960cd6e42e065a92d5f6b6ba829 authored about 2 years ago by kyowonjeong <[email protected]>

Publishing Site OpenMS/openms.de at 7c05216772a29c03939d6e0d841aa28d71775d16 on Tue Sep 20 14:02:29 UTC 2022

github.com/OpenMS/openms.github.io - 0e131b301a1f269347362476213297dee0ac039c authored about 2 years ago by rahul799 <[email protected]>

fixing links

github.com/OpenMS/OpenMS-website - 7c05216772a29c03939d6e0d841aa28d71775d16 authored about 2 years ago by rahul799 <[email protected]>

Publishing Site OpenMS/openms.de at 1fdffe17a0014a1d616fc2baa51b8ba9f8a8fdec on Tue Sep 20 13:47:24 UTC 2022

github.com/OpenMS/openms.github.io - 2e13f31000661f15c12a39d1429d1e22e27dd848 authored about 2 years ago by rahul799 <[email protected]>

typo

github.com/OpenMS/OpenMS-website - 1fdffe17a0014a1d616fc2baa51b8ba9f8a8fdec authored about 2 years ago by rahul799 <[email protected]>

Merge pull request #6284 from OpenMS/feature/MSP_spectral_matching

[Feature] MetaboliteSpectralMatcher input databases in msp and mgf file format

github.com/OpenMS/OpenMS - a0b4326b7e2ed868f48a310f89ede6bb556cd659 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6284 from OpenMS/feature/MSP_spectral_matching

[Feature] MetaboliteSpectralMatcher input databases in msp and mgf file format

github.com/OpenMS/OpenMS-1 - a0b4326b7e2ed868f48a310f89ede6bb556cd659 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6344 from OpenMS/fix_scoregetter

correct parameters

github.com/OpenMS/OpenMS-1 - 14ef63f24f8781c8e54425828de256a0cad733cd authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6344 from OpenMS/fix_scoregetter

correct parameters

github.com/OpenMS/OpenMS - 14ef63f24f8781c8e54425828de256a0cad733cd authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6343 from OpenMS/remove_qtconcurrent

remove dependency to QtConcurrent

github.com/OpenMS/OpenMS - 1f511f0ecb14d44855e26e75983e1e410d2e1b4d authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6343 from OpenMS/remove_qtconcurrent

remove dependency to QtConcurrent

github.com/OpenMS/OpenMS-1 - 1f511f0ecb14d44855e26e75983e1e410d2e1b4d authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6345 from OpenMS/fix_pyopenms

fix pyOpenMS wrapping of ExperimentalDesign

github.com/OpenMS/OpenMS-1 - d4ae8bde64597b45f24170f4d4c4ba51369ac2ff authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6345 from OpenMS/fix_pyopenms

fix pyOpenMS wrapping of ExperimentalDesign

github.com/OpenMS/OpenMS - d4ae8bde64597b45f24170f4d4c4ba51369ac2ff authored about 2 years ago by Timo Sachsenberg <[email protected]>

fix pyOpenMS wrapping of ExperimentalDesign

github.com/OpenMS/OpenMS - 1cba615dec175d2798000d204125b9afcbfba23c authored about 2 years ago by Timo Sachsenberg <[email protected]>

fix pyOpenMS wrapping of ExperimentalDesign

github.com/OpenMS/OpenMS-1 - 1cba615dec175d2798000d204125b9afcbfba23c authored about 2 years ago by Timo Sachsenberg <[email protected]>

Update TOPPASOutputFileListVertex.cpp

github.com/OpenMS/OpenMS-1 - 32723d8f43278893e79c1a05eed9e1ea8c0f0046 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Update TOPPASOutputFileListVertex.cpp

github.com/OpenMS/OpenMS - 32723d8f43278893e79c1a05eed9e1ea8c0f0046 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge branch 'develop' into feature/MSP_spectral_matching

github.com/OpenMS/OpenMS - 4f81379514e12a2cdd3acd566095a02538a57fd9 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge branch 'develop' into feature/MSP_spectral_matching

github.com/OpenMS/OpenMS-1 - 4f81379514e12a2cdd3acd566095a02538a57fd9 authored about 2 years ago by Timo Sachsenberg <[email protected]>

correct parameters

github.com/OpenMS/OpenMS-1 - e53ef6d4a9ee651352c2c8b0dd63559d083beed5 authored about 2 years ago by Timo Sachsenberg <[email protected]>

correct parameters

github.com/OpenMS/OpenMS - e53ef6d4a9ee651352c2c8b0dd63559d083beed5 authored about 2 years ago by Timo Sachsenberg <[email protected]>

remove dependency to QtConcurrent

github.com/OpenMS/OpenMS - b4bd33dce50b5d292f340bbd00b0ccf1fdd041dc authored about 2 years ago by Timo Sachsenberg <[email protected]>

remove dependency to QtConcurrent

github.com/OpenMS/OpenMS-1 - b4bd33dce50b5d292f340bbd00b0ccf1fdd041dc authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge branch 'develop' into feature/nase_debug

github.com/OpenMS/OpenMS-1 - 91a23c146e5ebd3c31c0d74c48dae01510c2d886 authored about 2 years ago by Samuel Wein <[email protected]>

Merge branch 'develop' into feature/nase_debug

github.com/OpenMS/OpenMS - 91a23c146e5ebd3c31c0d74c48dae01510c2d886 authored about 2 years ago by Samuel Wein <[email protected]>

[fix] fix merging of NASequence thiol code

github.com/OpenMS/OpenMS - 121f93755231b953d5bd3ac9951ca310bc16bdcf authored about 2 years ago by Samuel Wein <[email protected]>

[fix] fix merging of NASequence thiol code

github.com/OpenMS/OpenMS-1 - 121f93755231b953d5bd3ac9951ca310bc16bdcf authored about 2 years ago by Samuel Wein <[email protected]>

Merge branch 'feature/new_thiols' of ssh://github.com/poshul/OpenMS into feature/new_thiols

github.com/OpenMS/OpenMS-1 - 39edffac7ab94f2ebdd704233b3ed97ef83923ad authored about 2 years ago by Samuel Wein <[email protected]>

Merge branch 'feature/new_thiols' of ssh://github.com/poshul/OpenMS into feature/new_thiols

github.com/OpenMS/OpenMS - 39edffac7ab94f2ebdd704233b3ed97ef83923ad authored about 2 years ago by Samuel Wein <[email protected]>

Merge pull request #6342 from OpenMS/fix/pep_prot_quant

[fix] don't crash on empty peptide hits vector in PeptideAndProteinQuant

github.com/OpenMS/OpenMS - a0826c37f77996b66125c64373a7dc207234e517 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6342 from OpenMS/fix/pep_prot_quant

[fix] don't crash on empty peptide hits vector in PeptideAndProteinQuant

github.com/OpenMS/OpenMS-1 - a0826c37f77996b66125c64373a7dc207234e517 authored about 2 years ago by Timo Sachsenberg <[email protected]>

don't crash on empty peptie hits vector in PeptideAndProteinQuant

github.com/OpenMS/OpenMS-1 - 5064187a0e66d426a9375d3de9e6011030be544e authored about 2 years ago by Timo Sachsenberg <[email protected]>

don't crash on empty peptie hits vector in PeptideAndProteinQuant

github.com/OpenMS/OpenMS - 5064187a0e66d426a9375d3de9e6011030be544e authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge branch 'develop' into feature/nase_debug

github.com/OpenMS/OpenMS - 6ae250fba2fb01c9c4b77a853ee878d82d1849e4 authored about 2 years ago by Samuel Wein <[email protected]>

Merge branch 'develop' into feature/nase_debug

github.com/OpenMS/OpenMS-1 - 6ae250fba2fb01c9c4b77a853ee878d82d1849e4 authored about 2 years ago by Samuel Wein <[email protected]>

[fix] include proper retention time in NASE debugging output

github.com/OpenMS/OpenMS-1 - d261e9ece1142437e0108a770fbdf9ab567d103a authored about 2 years ago by Samuel Wein <[email protected]>

[fix] include proper retention time in NASE debugging output

github.com/OpenMS/OpenMS - d261e9ece1142437e0108a770fbdf9ab567d103a authored about 2 years ago by Samuel Wein <[email protected]>

[feature] add wrapping for NucleicAcidSpectrumGenerator

github.com/OpenMS/OpenMS - 48c7ec67b258005a25bc4e719fac7412510e4286 authored about 2 years ago by Samuel Wein <[email protected]>

[feature] add wrapping for NucleicAcidSpectrumGenerator

github.com/OpenMS/OpenMS-1 - 48c7ec67b258005a25bc4e719fac7412510e4286 authored about 2 years ago by Samuel Wein <[email protected]>

[fix] include proper retention time in NASE debugging output

github.com/OpenMS/OpenMS-1 - 1e8ef1b466649e8e4b4f069eeca3068b9e8a7901 authored about 2 years ago by Samuel Wein <[email protected]>

[fix] include proper retention time in NASE debugging output

github.com/OpenMS/OpenMS - 1e8ef1b466649e8e4b4f069eeca3068b9e8a7901 authored about 2 years ago by Samuel Wein <[email protected]>

Publishing Site OpenMS/openms.de at 7b4c3299efa9e43de47c68b176fef8a09b1a8a37 on Fri Sep 16 07:23:42 UTC 2022

github.com/OpenMS/openms.github.io - e3b04449206bd6ab873f37542ac93706866166bb authored about 2 years ago by rahul799 <[email protected]>

teams page updated

github.com/OpenMS/OpenMS-website - 7b4c3299efa9e43de47c68b176fef8a09b1a8a37 authored about 2 years ago by rahul799 <[email protected]>

Merge pull request #6339 from OpenMS/fix/plfq_bugs

fix some bugs recently introduced in large refactoring

github.com/OpenMS/OpenMS - e3dd2c934a49a4008494cbc1eda830dbbfa2f85c authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6339 from OpenMS/fix/plfq_bugs

fix some bugs recently introduced in large refactoring

github.com/OpenMS/OpenMS-1 - e3dd2c934a49a4008494cbc1eda830dbbfa2f85c authored about 2 years ago by Timo Sachsenberg <[email protected]>

workaround for duplicated score types

github.com/OpenMS/OpenMS-1 - 3f9515639508d740e37794948c0496a64bef7e54 authored about 2 years ago by timosachsenberg <[email protected]>

workaround for duplicated score types

github.com/OpenMS/OpenMS - 3f9515639508d740e37794948c0496a64bef7e54 authored about 2 years ago by timosachsenberg <[email protected]>

if scores have same name, old one gets tilde appended

github.com/OpenMS/OpenMS - 8b61c88f2ba67dbea554d22497e2d085b4a82165 authored about 2 years ago by timosachsenberg <[email protected]>

if scores have same name, old one gets tilde appended

github.com/OpenMS/OpenMS-1 - 8b61c88f2ba67dbea554d22497e2d085b4a82165 authored about 2 years ago by timosachsenberg <[email protected]>

Publishing Site OpenMS/openms.de at 3c93a84efab058e41d5761af5b163fd60941deeb on Thu Sep 15 15:32:03 UTC 2022

github.com/OpenMS/openms.github.io - 084409c74a0f611e926a68981ffd62bdffe37d1b authored about 2 years ago by rahul799 <[email protected]>

bottom radius added ref #59

github.com/OpenMS/OpenMS-website - 3c93a84efab058e41d5761af5b163fd60941deeb authored about 2 years ago by rahul799 <[email protected]>

Fix typo for thiol+methyl parsing

github.com/OpenMS/OpenMS - 8362b409a7635947beb8c5413b96e68087a23323 authored about 2 years ago by Samuel Wein <[email protected]>

Fix typo for thiol+methyl parsing

github.com/OpenMS/OpenMS-1 - 8362b409a7635947beb8c5413b96e68087a23323 authored about 2 years ago by Samuel Wein <[email protected]>

fix rel. vs. basename in other direction

github.com/OpenMS/OpenMS-1 - 163c5d1549c754e3d3ffd5d1626364fd25f9678d authored about 2 years ago by timosachsenberg <[email protected]>

fix rel. vs. basename in other direction

github.com/OpenMS/OpenMS - 163c5d1549c754e3d3ffd5d1626364fd25f9678d authored about 2 years ago by timosachsenberg <[email protected]>

fix some bugs recently introduced in large refactoring

github.com/OpenMS/OpenMS - 4b238c7405b4e74135681e3fd2b937d90ebe8dbf authored about 2 years ago by timosachsenberg <[email protected]>

fix some bugs recently introduced in large refactoring

github.com/OpenMS/OpenMS-1 - 4b238c7405b4e74135681e3fd2b937d90ebe8dbf authored about 2 years ago by timosachsenberg <[email protected]>

Publishing Site OpenMS/openms.de at f89fd52898bcd9e690db04d6940ad59f876fd46e on Wed Sep 14 12:45:31 UTC 2022

github.com/OpenMS/openms.github.io - bc85b87059f69352cdfbb5a6e8d02b9175167ffc authored about 2 years ago by rahul799 <[email protected]>

templating heroItems ref #59

github.com/OpenMS/OpenMS-website - f89fd52898bcd9e690db04d6940ad59f876fd46e authored about 2 years ago by rahul799 <[email protected]>

enhancement

github.com/OpenMS/OpenMS-website - abbb56afabfdb8a31abf3da4ae79c7920441f3d0 authored about 2 years ago by rahul799 <[email protected]>

Merge branch 'develop' into feature/OswImCalibOutput

github.com/OpenMS/OpenMS - e829919fc0964a3eaaa9d96853d1a1ed3f12ff57 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge branch 'develop' into feature/OswImCalibOutput

github.com/OpenMS/OpenMS-1 - e829919fc0964a3eaaa9d96853d1a1ed3f12ff57 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6306 from jpfeuffer/fix/syncIDQuantPLFQ

Huge refactor of PLFQ and Experimental design

github.com/OpenMS/OpenMS-1 - e4143aacf975dc1f7017aa91edb82c2ce95cd3ac authored about 2 years ago by Timo Sachsenberg <[email protected]>

Merge pull request #6306 from jpfeuffer/fix/syncIDQuantPLFQ

Huge refactor of PLFQ and Experimental design

github.com/OpenMS/OpenMS - e4143aacf975dc1f7017aa91edb82c2ce95cd3ac authored about 2 years ago by Timo Sachsenberg <[email protected]>

Update src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp

Co-authored-by: Julianus Pfeuffer <[email protected]>

github.com/OpenMS/OpenMS - 644311b91f81551f30ea425c83f4996816b32109 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Update src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp

Co-authored-by: Julianus Pfeuffer <[email protected]>

github.com/OpenMS/OpenMS-1 - 644311b91f81551f30ea425c83f4996816b32109 authored about 2 years ago by Timo Sachsenberg <[email protected]>

[fix] fix linter's mess

github.com/OpenMS/OpenMS-1 - a855f17db0e528015e5f6ecc7dc88024ffe819b2 authored about 2 years ago by Samuel Wein <[email protected]>

[fix] fix linter's mess

github.com/OpenMS/OpenMS - a855f17db0e528015e5f6ecc7dc88024ffe819b2 authored about 2 years ago by Samuel Wein <[email protected]>

fix lint

github.com/OpenMS/OpenMS - e345464076927aa4a33f2fcc7c5fc212e02ccba9 authored about 2 years ago by GitHub Linter <[email protected]>

fix lint

github.com/OpenMS/OpenMS-1 - e345464076927aa4a33f2fcc7c5fc212e02ccba9 authored about 2 years ago by GitHub Linter <[email protected]>

Merge branch 'develop' into feature/new_thiols

github.com/OpenMS/OpenMS-1 - 2fbf174dacb9b109b62b81964772b963883e5990 authored about 2 years ago by Samuel Wein <[email protected]>

Merge branch 'develop' into feature/new_thiols

github.com/OpenMS/OpenMS - 2fbf174dacb9b109b62b81964772b963883e5990 authored about 2 years ago by Samuel Wein <[email protected]>

[nop] clean up some comments

github.com/OpenMS/OpenMS - c933155a86663e2d4dafd06a0987eadd5f8b9120 authored about 2 years ago by Samuel Wein <[email protected]>

[nop] clean up some comments

github.com/OpenMS/OpenMS-1 - c933155a86663e2d4dafd06a0987eadd5f8b9120 authored about 2 years ago by Samuel Wein <[email protected]>

[feature] fixed calculation for thiol linkages

github.com/OpenMS/OpenMS-1 - 9a2c4b493acdd8b7676416a0a3cc8998c9e2244f authored about 2 years ago by Samuel Wein <[email protected]>

[feature] fixed calculation for thiol linkages

github.com/OpenMS/OpenMS - 9a2c4b493acdd8b7676416a0a3cc8998c9e2244f authored about 2 years ago by Samuel Wein <[email protected]>

fix small compile error/warning

github.com/OpenMS/OpenMS - 1d3b3b2e6fe2c380fd6a1576c6337ec876862732 authored about 2 years ago by Timo Sachsenberg <[email protected]>

fix small compile error/warning

github.com/OpenMS/OpenMS-1 - 1d3b3b2e6fe2c380fd6a1576c6337ec876862732 authored about 2 years ago by Timo Sachsenberg <[email protected]>

Publishing Site OpenMS/openms.de at f844ff12c966d571f058e98641ed7df211bb78fa on Sun Sep 11 15:41:36 UTC 2022

github.com/OpenMS/openms.github.io - 1bf98e9cbdb1c1d4a85b5917b91b0e6152de25f6 authored about 2 years ago by rahul799 <[email protected]>

ref #53

github.com/OpenMS/OpenMS-website - f844ff12c966d571f058e98641ed7df211bb78fa authored about 2 years ago by rahul799 <[email protected]>

Fix the very last tests that I overlooked.

github.com/OpenMS/OpenMS - b9bdfd0f9d914bc295893e0313f4b81fd93e422b authored about 2 years ago by Julianus Pfeuffer <[email protected]>

Fix the very last tests that I overlooked.

github.com/OpenMS/OpenMS-1 - b9bdfd0f9d914bc295893e0313f4b81fd93e422b authored about 2 years ago by Julianus Pfeuffer <[email protected]>

Allow merged IDs for spectralCounting. Fix some bugs with empty CMaps.

Update tests.

github.com/OpenMS/OpenMS-1 - 9abcb77e7bec40b733435a6f4ba234f5c0f908ad authored about 2 years ago by Julianus Pfeuffer <[email protected]>

Allow merged IDs for spectralCounting. Fix some bugs with empty CMaps.

Update tests.

github.com/OpenMS/OpenMS - 9abcb77e7bec40b733435a6f4ba234f5c0f908ad authored about 2 years ago by Julianus Pfeuffer <[email protected]>

Merge branch 'develop' into fix/syncIDQuantPLFQ

github.com/OpenMS/OpenMS - 344ff681b6d6987e92e0ad6133a7237114d0d540 authored about 2 years ago by Julianus Pfeuffer <[email protected]>

Merge branch 'develop' into fix/syncIDQuantPLFQ

github.com/OpenMS/OpenMS-1 - 344ff681b6d6987e92e0ad6133a7237114d0d540 authored about 2 years ago by Julianus Pfeuffer <[email protected]>

fix tests. mostly 0 vs 1 based issues

github.com/OpenMS/OpenMS-1 - 34aaa7eb5a215a24b248b7694b7c768fe37f598b authored about 2 years ago by jpfeuffer <[email protected]>

fix tests. mostly 0 vs 1 based issues

github.com/OpenMS/OpenMS - 34aaa7eb5a215a24b248b7694b7c768fe37f598b authored about 2 years ago by jpfeuffer <[email protected]>

[FIX] Alter gene select and join query to deal with multi gene-peptide mapping

github.com/OpenMS/OpenMS - 3fc6961cb94ebb92009a51035f2d1cabb0e9738a authored about 2 years ago by singjc <[email protected]>

[MINOR] Move name in Authors list and add change to CHANGELOG

github.com/OpenMS/OpenMS - 5e16b71e6afd136bbe3589130ba4ae5b4cd5c6b2 authored about 2 years ago by singjc <[email protected]>

[FIX] Alter gene select and join query to deal with multi gene-peptide mapping

github.com/OpenMS/OpenMS - 75bf0d1a7873db97bc5b61975be00c53a7cf8c7d authored about 2 years ago by singjc <[email protected]>

[NOP] Fix spacing

github.com/OpenMS/OpenMS - fdcd6ae31711048f5de522c676f976631e6433bc authored about 2 years ago by Joshua Charkow <[email protected]>

[NOP] Fix spacing

github.com/OpenMS/OpenMS-1 - fdcd6ae31711048f5de522c676f976631e6433bc authored about 2 years ago by Joshua Charkow <[email protected]>

[FIX] Alter gene select and join query to deal with multi gene-peptide mapping

github.com/OpenMS/OpenMS-1 - 3fc6961cb94ebb92009a51035f2d1cabb0e9738a authored about 2 years ago by singjc <[email protected]>

[FIX] Alter gene select and join query to deal with multi gene-peptide mapping

github.com/OpenMS/OpenMS-1 - 75bf0d1a7873db97bc5b61975be00c53a7cf8c7d authored about 2 years ago by singjc <[email protected]>

[MINOR] Move name in Authors list and add change to CHANGELOG

github.com/OpenMS/OpenMS-1 - 5e16b71e6afd136bbe3589130ba4ae5b4cd5c6b2 authored about 2 years ago by singjc <[email protected]>

Merge pull request #6288 from jpfeuffer/fix/ninjaOnWin

Allow configuring and building on Win with MSVC and nonVS generators

github.com/OpenMS/OpenMS-1 - e5eed0428852668f67a8c130eff25bf7331aae8c authored about 2 years ago by Julianus Pfeuffer <[email protected]>

Merge pull request #6288 from jpfeuffer/fix/ninjaOnWin

Allow configuring and building on Win with MSVC and nonVS generators

github.com/OpenMS/OpenMS - e5eed0428852668f67a8c130eff25bf7331aae8c authored about 2 years ago by Julianus Pfeuffer <[email protected]>

Merge branch 'develop' into fix/ninjaOnWin

github.com/OpenMS/OpenMS - 9875e6ea8658fb1e575ed177dca71e65a89783f1 authored about 2 years ago by Julianus Pfeuffer <[email protected]>

Merge branch 'develop' into fix/ninjaOnWin

github.com/OpenMS/OpenMS-1 - 9875e6ea8658fb1e575ed177dca71e65a89783f1 authored about 2 years ago by Julianus Pfeuffer <[email protected]>