Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

OpenMS

Make mass spectrometry analysis accessible to anyone
Collective - Host: opensource - https://opencollective.com/openms - Website: https://openms.org - Code: https://github.com/openms

[fix] fixed memory leaks in RibonucleotideDB class

github.com/OpenMS/OpenMS - 3d7140b7f47a849715eb8f94e11e6cbbce25d9c3 authored over 1 year ago by Samuel Wein <[email protected]>
Update CometAdapter.cpp (#6802)

github.com/OpenMS/OpenMS - 88a34cba71dac260c9900593f22ae4784198176e authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #378 from axelwalter/master

Update export to pandas dataframes file - solves warnings during notebook generation

github.com/OpenMS/pyopenms-docs - af55784bb2d2cc8e13eb214eeae25c90d3597ef7 authored over 1 year ago by axelwalter <[email protected]>
changed h4 layout

github.com/OpenMS/OpenMS-website - b98af0d51e0dd322f319b1f81cba7a9d66af0916 authored over 1 year ago by matteopilz <[email protected]>
Merge remote-tracking branch 'matteo/main' into main

github.com/OpenMS/OpenMS-website - 7a8880839309a689c08699354bbe201c6e70c88b authored over 1 year ago by matteopilz <[email protected]>
update website structure

github.com/OpenMS/OpenMS-website - a7dc8f6071b368976a02a577e0e0435b3124a87b authored over 1 year ago by matteopilz <[email protected]>
Update export_pandas_dataframe.rst

- escape | character not to be interpreted as reference

github.com/OpenMS/pyopenms-docs - d6de64cac90ec91d00504ebd192ffba8f45f0e29 authored over 1 year ago by axelwalter <[email protected]>
Update export_pandas_dataframe.rst

- edit link to installation
- remove Python Class references

github.com/OpenMS/pyopenms-docs - 279cf3d224229f3ec9ba026bb84c286be6393a6a authored over 1 year ago by axelwalter <[email protected]>
fix memory leak in ElementDB (when overwriting existing elements) and… (#6799)

* fix memory leak in ElementDB (when overwriting existing elements) and make it more robust agai...

github.com/OpenMS/OpenMS - 92d414e61fe584b05f6cf5548337798b014e9c1a authored over 1 year ago by Chris Bielow <[email protected]>
Merge remote-tracking branch 'origin/main' into main

github.com/OpenMS/OpenMS-website - b7f1dc90aa07c569ebe46a8360d71dc417e32062 authored over 1 year ago by matteopilz <[email protected]>
Update vcpkg.json (#6801)

github.com/OpenMS/OpenMS - 7a6e70eccf763d085919b5f3d543e8be1e50a3aa authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update vcpkg.json (#6800)

github.com/OpenMS/OpenMS - 636fcfb9e6da27d8c7d79326f498b0b275d8619e authored over 1 year ago by Timo Sachsenberg <[email protected]>
fix memory leak DeconvolvedSpectrum

github.com/OpenMS/OpenMS - ae90f23670fa58096c1538efb09781577569f5fd authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #2 from axelwalter/update-publications

Update Publications

github.com/OpenMS/OpenMS-website - 3e91fb389fb3160d207120ff1fb6bcf22e36ec7a authored over 1 year ago by axelwalter <[email protected]>
Update Publications

github.com/OpenMS/OpenMS-website - c41dacfeaeef1c8260f03b5a93a7e4f600f6eaad authored over 1 year ago by axelwalter <[email protected]>
update versions of steps

github.com/OpenMS/OpenMS-website - c3a13046048052bc5b3d66553890f0fc7dcb5fb4 authored over 1 year ago by axelwalter <[email protected]>
update path to publications.md

github.com/OpenMS/OpenMS-website - a827c75bd2e341ce0409c23be3af572a27507c31 authored over 1 year ago by axelwalter <[email protected]>
dont set path

github.com/OpenMS/OpenMS-website - 8f57557db6ac174b031517d1ee80c880d15d61f4 authored over 1 year ago by axelwalter <[email protected]>
update path to script

github.com/OpenMS/OpenMS-website - 2bf4dd9570dcdff8f433d30c1888e1a2196afda4 authored over 1 year ago by axelwalter <[email protected]>
print working directory

github.com/OpenMS/OpenMS-website - ac2a89795cdadb19800c0e78428e8dab3a03cacc authored over 1 year ago by axelwalter <[email protected]>
add action to update publications from PubMed

github.com/OpenMS/OpenMS-website - 0e20dacc5abdbb35613b412a4bd57924ba19c80b authored over 1 year ago by axelwalter <[email protected]>
Merge branch 'OpenMS:main' into main

github.com/OpenMS/OpenMS-website - 6565aab629618041f81601e64bd799a898e25d22 authored over 1 year ago by Matteo Pilz <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

github.com/OpenMS/OpenMS - c1e95236c35d22aaa804966694d652db081368fa authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fix regression

github.com/OpenMS/OpenMS - 9761f2906ae23f7bafaa1863f4da1fed535a3673 authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed bug in fileinfo

github.com/OpenMS/OpenMS - b623c5b44404a852a269a88c94bdda39d94d1654 authored over 1 year ago by Samuel Wein <[email protected]>
change badge from github-pages to netlify

github.com/OpenMS/.github - 711e4c2075b13b14a1887508c7c3fba606904316 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Merge pull request #77 from OpenMS/jpfeuffer-patch-1

Add netlify badge

github.com/OpenMS/OpenMS-website - 22cfbc315367272dcc784143b4a7c26042f9953d authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update README.md

github.com/OpenMS/OpenMS-website - ce5128794100b2abf00885a74b4f8e677cba7ebd authored over 1 year ago by Julianus Pfeuffer <[email protected]>
[fix] fixed MaRaCluster Adapter

github.com/OpenMS/OpenMS - 93507d76e56d575900cee482b5c5bb7532edd142 authored over 1 year ago by Samuel Wein <[email protected]>
Piwik scripts added (#181)

* piwik scripts added

* include js the correct way

---------

Co-authored-by: Julianus P...

github.com/OpenMS/OpenMS-docs - b66d4c5267404975cc9ba3fb9330ff7667258f2d authored over 1 year ago by Rahul Agrawal <[email protected]>
Merge pull request #76 from tjeerdijk/patch-2

fix-redirects

github.com/OpenMS/OpenMS-website - ee8639c8c5fa10345b58a6c52ab1a1610406168b authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update ModifiedPeptideGenerator.pxd (#6798)

github.com/OpenMS/OpenMS - f1f580d1592f3c6acff3554fc3ca3362a5ae162d authored over 1 year ago by Timo Sachsenberg <[email protected]>
updated nase

github.com/OpenMS/OpenMS-website - 734e5ec0e6f5021ed88eedeb9822285f670baa68 authored over 1 year ago by Tjeerd Dijkstra <[email protected]>
Update ModifiedPeptideGenerator.pxd

github.com/OpenMS/OpenMS - 81eb197a6e6a1785a826099c8f7b4d58972bdf7e authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update background.rst

github.com/OpenMS/pyopenms-docs - 012faa655f1377953475814327b52d005f4e844c authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update ModifiedPeptideGenerator.pxd

github.com/OpenMS/OpenMS - fece5c528a537aa023012dd913ed5e9677366db3 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #376 from OpenMS/Ayesha-Feroz-patch-1

Update wrapping_workflows_new_classes.rst

github.com/OpenMS/pyopenms-docs - 3e684a2f8eb3329cc79cd224b2e5e846d02ea766 authored over 1 year ago by Timo Sachsenberg <[email protected]>
fixes

github.com/OpenMS/OpenMS - 05ac115f3ff3bfb9cf5624ba6200e131bb4f8387 authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed issue with fileMerger not getting the correct output type

github.com/OpenMS/OpenMS - 77cb8169e1e70ae9e9c5dc5b5d23cebdf05ccec8 authored over 1 year ago by Samuel Wein <[email protected]>
Fixed redirects

github.com/OpenMS/OpenMS-website - 804181902392df6d9e2a3b1a2ff3d974eb61da4f authored over 1 year ago by Tjeerd Dijkstra <[email protected]>
changed header layout

github.com/OpenMS/OpenMS-website - 7344057ffdd37f9ded45431220f0c883be91376d authored over 1 year ago by matteopilz <[email protected]>
changed header layout

github.com/OpenMS/OpenMS-website - 43caf92db329e0f3a20bcc546ed421c0858bc836 authored over 1 year ago by matteopilz <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

github.com/OpenMS/OpenMS - 246a73db20035508ecc023cfdb6cd7b67d2f291d authored over 1 year ago by Samuel Wein <[email protected]>
fix tutorial bug

github.com/OpenMS/OpenMS - 1648c1cccb64c1f94fce03ca597a06137a55f935 authored over 1 year ago by Samuel Wein <[email protected]>
[fix] more test fixes

github.com/OpenMS/OpenMS - 51b1ef8e6293d1972b4c1b2f88634588039a119d authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6793 from cbielow/tv_fixgoto

TOPPView: fix goto dialogs

github.com/OpenMS/OpenMS - febfa0441bf149ba67f43d77266881f0b6d6e302 authored over 1 year ago by Chris Bielow <[email protected]>
[fix] fix tests

github.com/OpenMS/OpenMS - cc601d467a8c1979d3783a92554b9b4d1d70f19a authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6482 from poshul/feature/modomicsJSON

Feature/modomics json

github.com/OpenMS/OpenMS - 5ccab49fa98806b374febdb4dde3c7bcc1f1ebf5 authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'develop' into feature/modomicsJSON

github.com/OpenMS/OpenMS - 02a0765538e2cf4d401d980e5a0f40b1a7b9a2ab authored over 1 year ago by Samuel Wein <[email protected]>
Update RibonucleotideDB.cpp

github.com/OpenMS/OpenMS - 4312d0f9acb4b2746edf58519b2be43cee0a1c1b authored over 1 year ago by Samuel Wein <[email protected]>
fix test errors

github.com/OpenMS/OpenMS - 64da798f5a44dec8abcc55250ea68ba0c193a30d authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed calls to old bool syntax for fileHandler

github.com/OpenMS/OpenMS - 050f120c25feec8d54844b1eb6273caced67b4d0 authored over 1 year ago by Samuel Wein <[email protected]>
some cleanup

github.com/OpenMS/OpenMS - 2c0b4dc38b4952a140b03b928f5d4d9f2a35f2d8 authored over 1 year ago by Samuel Wein <[email protected]>
update THIRDPARTY

github.com/OpenMS/OpenMS - 17637fac4ef3ab38063469210f1d9c975b234cbc authored over 1 year ago by Samuel Wein <[email protected]>
[fix] fixed capitalization of storeIdentifications

github.com/OpenMS/OpenMS - a4f7eaba92f1add8111f0c5a994a4333371fe152 authored over 1 year ago by Samuel Wein <[email protected]>
Removed bool returns from fileHandler, replaced with throws

github.com/OpenMS/OpenMS - c84ee8ae947db3815d9c5aa6e23aa597215ad0a5 authored over 1 year ago by Samuel Wein <[email protected]>
install nightly pyopenms

github.com/OpenMS/streamlit-template - 5a1fb05a129166d18b453d3e34dab255ba9662f9 authored over 1 year ago by axelwalter <[email protected]>
fetch complete df in view

github.com/OpenMS/streamlit-template - d1b7ab51a1304af8bef3447a8d27c9dea8d3c81d authored over 1 year ago by axelwalter <[email protected]>
update requirements

github.com/OpenMS/streamlit-template - 8eea9dd41548e7716eac1767c1f9006943a5282d authored over 1 year ago by axelwalter <[email protected]>
setup basic app template

github.com/OpenMS/streamlit-template - a8ff30a415027ed262102b39a9637652086b02ac authored over 1 year ago by axelwalter <[email protected]>
fix bug (operate on wrong range)

github.com/OpenMS/OpenMS - 15006992331c8848c5f2c3c6ce6d68de43351bbd authored over 1 year ago by Chris Bielow <[email protected]>
fix compile error

github.com/OpenMS/OpenMS - 4b19b15b4c4e0bb32134a99b9b5b49c4ebd03e0e authored over 1 year ago by Chris Bielow <[email protected]>
add missing typename

github.com/OpenMS/OpenMS - 5cd095ccbd4f7c8794cc9348d218ddcfb93df32f authored over 1 year ago by Chris Bielow <[email protected]>
fix bug: wrong labels/swapped RT/mz dimensions in 2d GoTo dialogs.

github.com/OpenMS/OpenMS - c6624bf265ce1192ab9f411d82bbcb784f3b9dcc authored over 1 year ago by Chris Bielow <[email protected]>
add new method for minimal range in each dimension

github.com/OpenMS/OpenMS - 9c52b487a1fa93c2e6a110dbf075dfbe29701166 authored over 1 year ago by Chris Bielow <[email protected]>
fix possible bug

github.com/OpenMS/OpenMS - 40075d85a2f4d55081d583a69597f83d07e4fcbf authored over 1 year ago by Chris Bielow <[email protected]>
support shrinking to center point

github.com/OpenMS/OpenMS - d8661a1b3a43f56b3fa0404ab0c98d7a505abf3e authored over 1 year ago by Chris Bielow <[email protected]>
add extend support

github.com/OpenMS/OpenMS - f5e47fadc62f6c30919544684bdc2b64e0167992 authored over 1 year ago by Chris Bielow <[email protected]>
FIX knime fix_deps variable

github.com/OpenMS/OpenMS - 9f4c98476dbb4d087db74ab15f1edac662f9d8b2 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime-openms Dockerfile

replace informatik url

github.com/OpenMS/dockerfiles - fc2acfdb0d143eb7bfd96df3eec6f4818d56800c authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update informatik url

github.com/OpenMS/OpenMS - 5cdc72b5515b3bf97934c6f66a3e697abe86fdff authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

github.com/OpenMS/OpenMS - 003a248bafadd6a966a2e715b506c1088873ad4a authored over 1 year ago by Julianus Pfeuffer <[email protected]>
use local R lib knime_tests.yml

github.com/OpenMS/OpenMS - 1d181ea6bb67e329981ad2fc59608417bd3d2792 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

github.com/OpenMS/OpenMS - 9d7e880fdfe94a434d367d40983c09fcbe12603f authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

github.com/OpenMS/OpenMS - 6e10caac6261d8e2758366ca1d9e70fc2d8d908b authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_tests.yml

github.com/OpenMS/OpenMS - a6cfdfdadaeff434639fb4cc9b48006026674b14 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Create knime_tests.yml

github.com/OpenMS/OpenMS - 558070e85eb240336ab277d1aa3443b106c46c5e authored over 1 year ago by Julianus Pfeuffer <[email protected]>
try extended regex sed

github.com/OpenMS/OpenMS - 56c6fa911625be46103ec19ba88653b6ac6d4447 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
fix memory leaks (#6792)

* fix memory leak in elementsdb

* fix FLASHDeconv test memory leak

* another test

* som...

github.com/OpenMS/OpenMS - e1fb33c9058358417c3cd4db03c21cdc81fbd0d8 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update containerdeploy.yml

github.com/OpenMS/OpenMS - edb12773cb7e7c9a8cc301a13eb18aa590a8102d authored over 1 year ago by Julianus Pfeuffer <[email protected]>
try singularity directly on runner

github.com/OpenMS/OpenMS - 9a34c6d5fe251024c54e67b2b09669290d0a207d authored over 1 year ago by Julianus Pfeuffer <[email protected]>
move MzMLFile includes to where they are actually still needed and comment

github.com/OpenMS/OpenMS - c3cfc8e06823ff59f8d4297d3806af14c1be1d6c authored over 1 year ago by Samuel Wein <[email protected]>
fixed extensions for external tool tests, cleaned up docstrings in FileHandler

github.com/OpenMS/OpenMS - 67949daa0ea38600a1ee07bf6543ec010245b192 authored over 1 year ago by Samuel Wein <[email protected]>
fixed extensions for external tool tests, cleaned up docstrings in FileHandler

github.com/OpenMS/OpenMS - e76b892f006c56663832c46f15ef9781d2759328 authored over 1 year ago by Samuel Wein <[email protected]>
Merge pull request #6791 from OpenMS/feature/setGlobalLogLevel

[FEATURE] allow setting global log level easily.

github.com/OpenMS/OpenMS - dec7622ffdf93536e5fac330223fe5227132a4e7 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
[fix] fixed bug in tutorials, cleaned up Filehandler and made sure docs were updated. Updated FileHandler_test to deal with proper exception checking

github.com/OpenMS/OpenMS - 1c346961a677e3460ada2ef847d4e31a0c42eda4 authored over 1 year ago by Samuel Wein <[email protected]>
forgot cimports

github.com/OpenMS/OpenMS - 25edff2366b0b3c5d6de47684dcd9e72ce8d37cf authored over 1 year ago by jpfeuffer <[email protected]>
fix tests

github.com/OpenMS/OpenMS - e38e622b12636944a0475544cae5824365f984c6 authored over 1 year ago by jpfeuffer <[email protected]>
[FEATURE] allow setting global log level easily.

github.com/OpenMS/OpenMS - dde2b58450923f57b3c5033266389fc1e6907ef4 authored over 1 year ago by jpfeuffer <[email protected]>
finished conversion

github.com/OpenMS/OpenMS - 66f6b101e950190d85654574657105dae62bf8b0 authored over 1 year ago by Samuel Wein <[email protected]>
more conversions, added overload to ClassTest to allow creation of temp files with specified extensions

github.com/OpenMS/OpenMS - 0510b1bcc9add345ec07a31af776f482be2a3981 authored over 1 year ago by Samuel Wein <[email protected]>
more

github.com/OpenMS/OpenMS - 9d82b4fe89f44083f1cf4bc9310d763e731b9139 authored over 1 year ago by Samuel Wein <[email protected]>
Update environment.yml

github.com/OpenMS/streamlit-template - 8659def5514335b5fcec1ee962ed7b158238832d authored over 1 year ago by axelwalter <[email protected]>
Update environment.yml

github.com/OpenMS/streamlit-template - 73e189559fd52e8b94e53ab770a6da5227f28419 authored over 1 year ago by axelwalter <[email protected]>
Update environment.yml

github.com/OpenMS/streamlit-template - c8862e0bf311ccc659d59da3cf7309dbe1e060e7 authored over 1 year ago by axelwalter <[email protected]>
Update environment.yml

github.com/OpenMS/streamlit-template - ccd42aacf49e96b24a78f5a2def8df260e418a4f authored over 1 year ago by axelwalter <[email protected]>
Update environment.yml

github.com/OpenMS/streamlit-template - 103df3e7d337b7b76d20dfabcc1908ab259a6fb7 authored over 1 year ago by axelwalter <[email protected]>
Create environment.yml

github.com/OpenMS/streamlit-template - db68bb3aa51e6f86362ea567b2c23f02c88ab143 authored over 1 year ago by axelwalter <[email protected]>
Create Template.py

github.com/OpenMS/streamlit-template - 743a8f08dba6ef9fcb98c45d15be7945e55c749d authored over 1 year ago by axelwalter <[email protected]>
Initial commit

github.com/OpenMS/streamlit-template - ffd10901456c131ab424c52bec935a863564b20f authored over 1 year ago by axelwalter <[email protected]>