Ecosyste.ms: OpenCollective

An open API service for software projects hosted on Open Collective.

OpenMS

Make mass spectrometry analysis accessible to anyone
Collective - Host: opensource - https://opencollective.com/openms - Website: https://openms.org - Code: https://github.com/openms

fix bug

github.com/OpenMS/OpenMS - 81cdab16639603d3ed5a867d688a47dff8895c09 authored over 1 year ago by Chris Bielow <[email protected]>
print full logs in case of failure on gha ci

github.com/OpenMS/OpenMS - f0783ac97f730641298fbd44607dc1abe1a8f665 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
fix CMake warnings

github.com/OpenMS/OpenMS - 0f80cbfc1360ebf1979decad97b5f9dc355b8689 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Merge pull request #16 from Arslan-Siraj/app_exe

App exe

github.com/OpenMS/streamlit-template - cd9a81e2cfbd4faadde82ee9d5d92b41a02c25cc authored over 1 year ago by axelwalter <[email protected]>
add main file to dist/

github.com/OpenMS/streamlit-template - 0d0fccb2982593ada225bd917085d965bd12c855 authored over 1 year ago by Arslan Siraj <[email protected]>
Merge pull request #7024 from OpenMS/full_multijob_matrix_gha

Full multijob matrix gha

github.com/OpenMS/OpenMS - 566d789d70c7ed8019484b0db20c67b49b66d3f6 authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'full_multijob_matrix_gha' of ssh://github.com/OpenMS/OpenMS into full_multijob_matrix_gha

github.com/OpenMS/OpenMS - fb21db36bd60ae5b2138cb4628e866f8c35638b0 authored over 1 year ago by Samuel Wein <[email protected]>
Remove old CI script

github.com/OpenMS/OpenMS - 3925284499cd8432c26916212128ebfbcfa791f9 authored over 1 year ago by Samuel Wein <[email protected]>
Update build-windows-executable-app.yaml

github.com/OpenMS/streamlit-template - 46a3f49ef1f2eeca1746d5973ad3a131a39f8afc authored over 1 year ago by Arslan Siraj <[email protected]>
Update openms_ci_matrix_full.yml

Re-comment out actual upload, add some description for what this action does.

github.com/OpenMS/OpenMS - 44bb16895a2737d31340d59a9efabeda3e823a54 authored over 1 year ago by Samuel Wein <[email protected]>
modify env path

github.com/OpenMS/streamlit-template - e6286353c231fc1adb8be6a0569428ce888b9616 authored over 1 year ago by Arslan <[email protected]>
test and build with OpenMS

github.com/OpenMS/streamlit-template - eac3d4be9e9cd1f4288769072a3eb4c9fead08f6 authored over 1 year ago by Arslan <[email protected]>
Update openms_ci_matrix_full.yml

Fix Brew flag for doxygen et al installation

github.com/OpenMS/OpenMS - c9d57e0c221e66ceee3a9c73b06d0aca96563b58 authored over 1 year ago by Samuel Wein <[email protected]>
streamlit test added

github.com/OpenMS/streamlit-template - 9df2fe17107c54d985448f522fe8f55926a0802f authored over 1 year ago by Arslan <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - fa6530b4a0a1c7ca293ac89b882339c31e4170ae authored over 1 year ago by Julianus Pfeuffer <[email protected]>
find depth param

github.com/OpenMS/OpenMS - a8604ad4e47f5406686b0c627ba16aab19e912be authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - 3d8237391ef8cb20ec8dd246c25ee359f14afc75 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - 70345399c654bf870c230b0efb9a6b3b6e0ed45d authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - 3bd347e29afa9bb3483db76bfdd53df2403d25f8 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update cipackage.cmake

github.com/OpenMS/OpenMS - b4669af163a07f2953a8d018d8fd157110cc3dec authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - 9bde7e491962712099025ea452a711d7bb056ac7 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - c8e7c1c597e021bd4b9171f9b208e13cb24ff16e authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - 71b8aa5b74737df4849ebde4dd285bdc5cf5f3c5 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update knime_package_support.cmake

github.com/OpenMS/OpenMS - b684de680f2811edef2f1d2158696db25b89d39c authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - 4b62b4cac5d4fe31b667f05fa04e9bb7770d4300 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - 785bc16204c2def5ea272c6acab26fff3a942f3d authored over 1 year ago by Julianus Pfeuffer <[email protected]>
I hate cmake

github.com/OpenMS/OpenMS - aec142b96ec85663217c4fb7222914ca727603da authored over 1 year ago by Julianus Pfeuffer <[email protected]>
se_dir

github.com/OpenMS/OpenMS - 929d6bd455f2d0269e474ae715bde04887f435a0 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
?????????

github.com/OpenMS/OpenMS - e71781c3eae832799d53370903f166d4d93a22fc authored over 1 year ago by Julianus Pfeuffer <[email protected]>
fix win compiler name

github.com/OpenMS/OpenMS - e44d24921516a5f21ef98ecef77220613be4f027 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Use 7z???

github.com/OpenMS/OpenMS - ffd2220f561052601e96101fd25b302864826ffe authored over 1 year ago by Julianus Pfeuffer <[email protected]>
cmake quotes

github.com/OpenMS/OpenMS - c331f13af2b8c8abd5c49f75dc577e74cd81e478 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
fix curl contrib?

github.com/OpenMS/OpenMS - ed50f8fc480acea2c68bffdf2685e511076db8a1 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
don't fail fast

github.com/OpenMS/OpenMS - 3f779ee29be9cf5daa16d62b6c712714815166d8 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Use macro

github.com/OpenMS/OpenMS - 43ace8bc27c42249f77e7ef34fa2a4328332d2df authored over 1 year ago by Julianus Pfeuffer <[email protected]>
parent scope?

github.com/OpenMS/OpenMS - 24b25981c21dcf8de691c7f11fa65a5c2a67c742 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update cibuild.cmake

github.com/OpenMS/OpenMS - c0b17c81b8eed840ca6fa40a2636324c47ccc5a7 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
debug........

github.com/OpenMS/OpenMS - d694e5a151a3c4e2b6a9b8b5f3d9840cb3b34430 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
foreach

github.com/OpenMS/OpenMS - 1d48dbae56c87125e325f1b430907cc3965ec44a authored over 1 year ago by Julianus Pfeuffer <[email protected]>
cmake function

github.com/OpenMS/OpenMS - 1ba32f099dd1dc1430bc375d06ae679dac7ca63b authored over 1 year ago by Julianus Pfeuffer <[email protected]>
no quotes

github.com/OpenMS/OpenMS - 08be780e67c5aecf1079ee3bcce7ac9d529e568c authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - fbe01e1adc17ee7da6bbacf03b4a30c383005fcc authored over 1 year ago by Julianus Pfeuffer <[email protected]>
no quotes

github.com/OpenMS/OpenMS - 9ad141aacb60627569603908b600b11cb73c80d6 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
quotes?

github.com/OpenMS/OpenMS - 781d89c33b7354441fce510e54cbeb1ba6650e16 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
package ifcase

github.com/OpenMS/OpenMS - 1fb4553c3bbb75d261c3824364850127d040a5d6 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - bda5e3218daacba6db82cf605f6c03ed1d5e6955 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
Use double brackets?

github.com/OpenMS/OpenMS - a141283f09db4d21bb145f125ba31b63d6427052 authored over 1 year ago by Julianus Pfeuffer <[email protected]>
move SIMDe code into cpp

github.com/OpenMS/OpenMS - 8da84c8a191e607e7f132c21cf8ad06a6da2471b authored over 1 year ago by Chris Bielow <[email protected]>
Merge branch 'simd_removeWhitespace' into feat_simd_whitespace

github.com/OpenMS/OpenMS - c720c67f8bc92873a5bb7c3ed89cb60f0abaef19 authored over 1 year ago by Chris Bielow <[email protected]>
create common SIMDe header

github.com/OpenMS/OpenMS - eba0658e932947c7b1baab5787c14ab5477a3d67 authored over 1 year ago by Chris Bielow <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - 5d655e2fc8f2f80283a93805900e1ec708847b1f authored over 1 year ago by Samuel Wein <[email protected]>
Update openms_ci_matrix_full.yml

Force DO_PACKAGE for testing.

github.com/OpenMS/OpenMS - f08ef8cb8d047d4a42f9b69601b2395bf34312c8 authored over 1 year ago by Samuel Wein <[email protected]>
Update openms_ci_matrix_full.yml

nop. changed workflow name to be less confusing

github.com/OpenMS/OpenMS - 933f49841254c61c641fb53c4e40983ac30db260 authored over 1 year ago by Samuel Wein <[email protected]>
Update openms_ci_matrix_full.yml

github.com/OpenMS/OpenMS - b9cf643a1a9da10c54bf8bc90536e14bcfb8b93e authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'develop' into full_multijob_matrix_gha

github.com/OpenMS/OpenMS - 3fcf06f9f92c3fc07df48732877faca4ee1acc51 authored over 1 year ago by Samuel Wein <[email protected]>
Update openms_ci_matrix_full.yml

Added secrets for ssh upload. NB there is still an issue with https://unix.stackexchange.com/que...

github.com/OpenMS/OpenMS - 68dbc4512af9800026c938d30122a0c995acf9af authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

github.com/OpenMS/OpenMS - 6b73f8817a20805337cbb7525c4332673e82faa5 authored over 1 year ago by Timo Sachsenberg <[email protected]>
add option to filter spectra by peptide (#7021)

* add option to filter spectra by peptide

* Update src/topp/IDFilter.cpp

github.com/OpenMS/OpenMS - 2ac52ad51a70eaad36077f95d898c7cfc4fd1d44 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Bump contrib from `1240564` to `04d64c6` (#7023)

Bumps [contrib](https://github.com/OpenMS/contrib) from `1240564` to `04d64c6`.
- [Commits](htt...

github.com/OpenMS/OpenMS - 6e2ab75ae5565bfea0550d1bfc6e85e1401fe345 authored over 1 year ago by dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com>
Merge pull request #7022 from cbielow/fix_neon

[FEATURE] Report active ISA extensions

github.com/OpenMS/OpenMS - 15e8641e9b6fad76e8314448a808d68231a93088 authored over 1 year ago by Chris Bielow <[email protected]>
Merge branch 'fix_neon' of https://github.com/cbielow/OpenMS into fix_neon

github.com/OpenMS/OpenMS - f44456c018b207517aa3de23bb4ecaa89a045810 authored over 1 year ago by Chris Bielow <[email protected]>
fix unreferenced formal param

github.com/OpenMS/OpenMS - a8309c88f2d79673b72564bcfd4227bfaf26e688 authored over 1 year ago by Chris Bielow <[email protected]>
Merge branch 'develop' into fix_neon

github.com/OpenMS/OpenMS - 45c96b02dd17d24575a34bd153f8d59a056725f1 authored over 1 year ago by Chris Bielow <[email protected]>
add Changelog

github.com/OpenMS/OpenMS - 6fb46094470f0611f1270bdda1baa41d01bbe7be authored over 1 year ago by Chris Bielow <[email protected]>
code to detect ISA extensions

github.com/OpenMS/OpenMS - 61ba87a9bccdfe00a580db1e40c701cbf7acc343 authored over 1 year ago by Chris Bielow <[email protected]>
fix compile error on MacOS-ARM

github.com/OpenMS/OpenMS - d0bfe5c428ee7ed33a8ad684b591b1298d979261 authored over 1 year ago by Chris Bielow <[email protected]>
removed EnzymaticDigestionLogModel (#7019)

github.com/OpenMS/OpenMS - f6d5eba065ca0aff6096d2b8e6325195a98bf83e authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge pull request #15 from axelwalter/github-action-for-exe

Add action to build windows executable

github.com/OpenMS/streamlit-template - 23e97c47d849e7db328a6bce41ec7a43ab6eccc6 authored over 1 year ago by axelwalter <[email protected]>
fixed broken / deprecated link (#7018)

github.com/OpenMS/OpenMS - 26ef14f86200e36e45ea2352a5b4387b38faab84 authored over 1 year ago by Matteo Pilz <[email protected]>
removed obsolete gsl patches

github.com/OpenMS/contrib - 04d64c6ae206a24cd3bf0d553022f58df86175eb authored over 1 year ago by Timo Sachsenberg <[email protected]>
add action to build windows executable

github.com/OpenMS/streamlit-template - 17572df5e6d4e7f889127edc5099e295eff3154b authored over 1 year ago by axelwalter <[email protected]>
Merge pull request #10 from Arslan-Siraj/exe-check

Exe check

github.com/OpenMS/streamlit-template - 6f3a2e98f1cc5e74d8a133f2afd8e536ca4725b7 authored over 1 year ago by axelwalter <[email protected]>
Merge pull request #7017 from cbielow/fix_neon

fix neon flags (not needed)

github.com/OpenMS/OpenMS - a4e4891a5e79cb043e84de6145ef7978c5381dea authored over 1 year ago by Chris Bielow <[email protected]>
[cleanup] remove DocumentIDTagger and IDPool from share (#7015)

* remove DocumentIDTagger and IDPool from share

* fix cmake files

* ammend

---------

...

github.com/OpenMS/OpenMS - 13f8c6cd4cd689714432dd2417d3a4d0c75df2f1 authored over 1 year ago by Timo Sachsenberg <[email protected]>
fix neon flags (not needed)

github.com/OpenMS/OpenMS - 73ff760e2b04c7a3e96a209fad0bc3a41f7631f2 authored over 1 year ago by Chris Bielow <[email protected]>
[cleanup] remove linear mapping PIP (#7016)

* remove linear mapping PIP

* remove tutorial and test

* update some cmake files

------...

github.com/OpenMS/OpenMS - 29f4f7137ec42854f3592e56dce802d4e25641aa authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge branch 'Feature/GenericFileLoad' of ssh://github.com/poshul/OpenMS into Feature/GenericFileLoad

github.com/OpenMS/OpenMS - 28abe2199ee34514b694fcb7312b91c68dcfd3a3 authored over 1 year ago by Samuel Wein <[email protected]>
nop fix typo

github.com/OpenMS/OpenMS - 68589aa32a9e97a857845cd97c6067d35c1d3489 authored over 1 year ago by Samuel Wein <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

github.com/OpenMS/OpenMS - 5caa220692c58f5830b01e9c2b69ed02651822a5 authored over 1 year ago by Samuel Wein <[email protected]>
Update content/en/applications/flashida.md

Co-authored-by: Julianus Pfeuffer <[email protected]>

github.com/OpenMS/OpenMS-website - d2a699142d712d58f5d0071a8d7d44f84c01dbb6 authored over 1 year ago by Matteo Pilz <[email protected]>
added flashida applications page

github.com/OpenMS/OpenMS-website - 91aac083f31bdc0c0e63ed052328ce9de13d8804 authored over 1 year ago by matteopilz <[email protected]>
remove errorstring from XMLHandler.pxd (#7014)

github.com/OpenMS/OpenMS - 8c4f936896eeefe4de91d939773f3db1d3d050b8 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update src/openms/source/FORMAT/FileHandler.cpp

github.com/OpenMS/OpenMS - 2c40cc96c33bb8d4cc3b329e6ad112f341e21d6f authored over 1 year ago by Samuel Wein <[email protected]>
remove UTIL from build scripts

github.com/OpenMS/build-scripts - 17043bb70ab2be1d92f17ab00550ba587584dd20 authored over 1 year ago by Timo Sachsenberg <[email protected]>
update build scripts

github.com/OpenMS/build-scripts - 89384282cdf836c6c35133e001c10650ef2df50c authored over 1 year ago by Timo Sachsenberg <[email protected]>
update version

github.com/OpenMS/dockerfiles - 47285fe02d97d6df7a669bdeb14e162a48aadb98 authored over 1 year ago by Timo Sachsenberg <[email protected]>
remove UTIL

github.com/OpenMS/dockerfiles - d73b634a2067e80af005481672fc2b6f10128969 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Merge branch 'develop' into Feature/GenericFileLoad

github.com/OpenMS/OpenMS - 459db70a7e8ddb3b431d65718951dd6edac6ed16 authored over 1 year ago by Samuel Wein <[email protected]>
Update src/topp/MaRaClusterAdapter.cpp

github.com/OpenMS/OpenMS - b0722bdfb28a15147bcbe02163d290dc0aa8070c authored over 1 year ago by Samuel Wein <[email protected]>
Apply suggestions from code review

github.com/OpenMS/OpenMS - 96a4e85d11e5d096dfbd7588820b66bce96bd083 authored over 1 year ago by Samuel Wein <[email protected]>
Update src/openms/include/OpenMS/FORMAT/FileHandler.h

github.com/OpenMS/OpenMS - ae05bc4b114d72199787121b7ebae026f18d4c57 authored over 1 year ago by Samuel Wein <[email protected]>
Update src/openms/include/OpenMS/FORMAT/FileHandler.h

github.com/OpenMS/OpenMS - 2c6aff838824d153d6d9a193d9362ada0051936d authored over 1 year ago by Samuel Wein <[email protected]>
Update src/openms/include/OpenMS/FORMAT/FileHandler.h

github.com/OpenMS/OpenMS - 0e1cff42c228fb3f030b92eddf7f2060ca404791 authored over 1 year ago by Samuel Wein <[email protected]>
Fix_sage (#7013)

* make idxml user parameter output deterministic

* new fix

* added sage to changelog

*...

github.com/OpenMS/OpenMS - 24276c2d42325cfe93fde7e21c2b9dd76febcfe4 authored over 1 year ago by Timo Sachsenberg <[email protected]>
Update CHANGELOG

Co-authored-by: Timo Sachsenberg <[email protected]>

github.com/OpenMS/OpenMS - 0743496226778a9b84d5a1b2719b602df0d724eb authored over 1 year ago by Samuel Wein <[email protected]>
Update CHANGELOG

Co-authored-by: Timo Sachsenberg <[email protected]>

github.com/OpenMS/OpenMS - 7baaec9bfa1ca9a7373c384200824ea00c5b7fc0 authored over 1 year ago by Samuel Wein <[email protected]>
fix a couple of documentation things, improve fileio tutorial

github.com/OpenMS/OpenMS - 60e63e087c93f275bae22d21351e626f16b7e2c9 authored over 1 year ago by Samuel Wein <[email protected]>
Merge remote-tracking branch 'upstream/develop' into Feature/GenericFileLoad

github.com/OpenMS/OpenMS - 0f3fa7a215de28a96c6d21eef909a566f202fc96 authored over 1 year ago by Samuel Wein <[email protected]>
[nop] fix changelog

github.com/OpenMS/OpenMS - ac747b6adceff4b4dcc9b6ad6408dc3c1e6788d1 authored over 1 year ago by Samuel Wein <[email protected]>
fix redirects

github.com/OpenMS/OpenMS-website - cce1d5fa837d7da1dfcd51aef175c31d60a38461 authored over 1 year ago by matteopilz <[email protected]>